BGIOSGA008687

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Revision as of 03:19, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008687| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008687, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA008687

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008687, complete gene.

LocusTag

OSJNBA0014E22.36-1

Ensembl Transcript ID

BGIOSGA008687-TA

Ensembl Protein ID

BGIOSGA008687-PA

Length

5109

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27359702..27364810

Sequence Coding Region

27359702..27361012,27362954..27363044,27363127..27363284,27363380..27363431,27363861..27363943
,27364077..27364170,27364281..27364810

Genome Context

<gbrowseImage1> name=IndicaChromosome02:27359702..27364810 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:27359702..27364810 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGTGGAGGAGGAGGTGGTGGGGGAGGAGGAGGAGGAGGAGCTGTTCTACGAGTCGCTCGATCGCATCCTCTCGTCGTCGGGCTCCTCCACCTCGGCCTCGGACGACGATGGGGACCACCCGCGCCGCCGCCGCGGGTACGACGCGGGGGCGGCGGCCGCGGCCGCGGCGCTCGACCTGTGGACCTCCGAGCCGGCGCCCATCCAGGAGCGACGGCGGCGGCTGCTCCAGCTGATGGGCCTCTCCGGTGACCCGTCGCTCGCGCGATTCGAGAGGGGCCGATCGGCTCCATGCGACGCCGTGGGCCCGCTGCCGTCCTCGCCGGTTGCGCGGTCCAGATCGAGCGGCGCCACGCCGGCATCCGCCGCGAAACCCCCGCTCGGAGGAGGCCGCTTGCGCGGAGCCTCGTCCGATGTGTCAGATGCCACGTTGGAGGCTGTTGAGGAGGACCCAAGGTGCTTGATCAGAAACCTCGACGACGGCAGCGAGTTCCTGGTGAGAGAGGAGTTCGGTCTCCGTGAGGTCGGTACGGGGCGGCAGCTCACCATGGAGGAGTTCGAGTTGTTCATCGGCCGCTCACCCATCGTCCAAGAGCTCATGCGCCGCCAGAGCGTGGTCAATTCCAACTCAAACTCCAATTCCCAAAGTGGCGCTTCCACTCCCATTGAGAGGTCCAGCTCCGGTTCCAGCAATGGTGGGGCGCGCTACAAGCGGCGCAACAGCTGGCTCCGCAGCCTCCGCAGTGCAGCTGGCTCCATGGTTACATACACTCGTGACCGCCGCAGCAGCGACGAGAAGGATACATCCTCAGATAAGGGTGGGCATCGCTCCAGCTCGGCTACGGATGACAGCCAAGATGGTGTTGCACACCATGGCCCGGACCGTGTTAAGGTTCGGCAGTATGGTAAATCCTATAAGGAGCTCAGTGGCTTGTTCATGAACCAGGATATAAAGGCGCACAGTGGGTCCATTTGGAGCATCAAGTTTAGTCCTGATGGGCACTTTCTCGCAAGTGCTGGTGAGGATTGTGTCATCCATGTCTGGGAGGTGTTGGAGTGGAAGATGATAGAGGAGAAGGGGTTGGAAGAAAATGGGGTCTTTGATCCAGAGTCGATGTTGGTATCCACGGCTTCAGAGGGAAGCCATCGGGAGAAGAAGCTGCGGGCAAAGGCAGTACACAATCAGAGATCAGTAAGCTCAGACCGGTTGATGGTGCCAGAACATGTGTTTGCACTATCAGAGAAACCCGTGATAACCTTTGCAGGGCATTCTGAGGATGTGCTTGACCTTAGCTGGTCCAAATCTCAGTACTTGCTTTCATCTTCAATGGATAAAACTGTACGGTTGTGGCACGTGTCAAGCACTTACTGTTTGAAAACCTTCTCCCACAGTGACTATGTGACTTGCATCCAGTTCAATCCTGTTAATGATAAATACTTCATTAGTGGTTCCCTGGATAAAAAGGTTCGAATTTGGAGTATACAAGAACGCAAAATTGTTGACTGGATTGATCTGCATGAAATGATCACAGCTGCCTGTTATACCCCTGATGGACAGGGTGCACTCGTTGGCTCCCACAAGGGCAAGTGCCATGTCTACGATATTTCTGATAATATGCTTAAGCACAAGAAACAGATTGATCTACATATTAAGAAAAGGAAATCTAGCCAGAAGAAAATCACAGGAATTCAGTTTGTTCCAGGGAGTTCTTCAAAGGTCATCATCACATCTGCAGATTCACGAATTCGAGTTATTGACAGTTTTGAACTAGTTTGCAAATTTAAAGGCTTTCGTAACACCAACAGCCAAATTTCTGCTTGTTCAGCTGTGAAAGGGAGATATCTTATCTCTGCAAGTGAGGATTCCCATGTATATATGTGGAGATGTAATGATGATTCCGAGCCAAACACAAAGAAGGGCATTGTTTCTATCACAAATACCCATGAACACTTCCACTGCGAGGGTGTGACAGTTGCTGTTTCTTGGCCTTGTGCCAGCAGCACAATGACATCTAGAGAATGGCCTGAGAATGGCCTGTCTGGATCTGAGCTTGATAAAGATCAGGAGATGCCTGATGCTCAGCACCAGAGCAACATCATCAGAAACACCAACCCAAATCATAATGGTGATACATCTGCGACTTGGTCTGAAGAACTCATGACACCAACAAAACAGAGCCCGCGGTCTAGTGCCAGCCATCCTATGGAGGGAGATCAAGCTCCGAGTCATTCGGCCTGGGGCTTGGTGATTGTCACAGCAGGCCATGAGGGTCATATCAGAACATTTCAGAACTTCGGCTTTCCCGTTAGAGTATAG</cdnaseq>

Protein Sequence

<aaseq>MSVEEEVVGEEEEEELFYESLDRILSSSGSSTSASDDDGDHPRRRRGYDAGAAAAAAALDLWTSEPAPIQERRRRLLQLMGLSGDPSLARFERGRSAPCDAVGPLPSSPVARSRSSGATPASAAKPPLGGGRLRGASSDVSDATLEAVEEDPRCLIRNLDDGSEFLVREEFGLREVGTGRQLTMEEFELFIGRSPIVQELMRRQSVVNSNSNSNSQSGASTPIERSSSGSSNGGARYKRRNSWLRSLRSAAGSMVTYTRDRRSSDEKDTSSDKGGHRSSSATDDSQDGVAHHGPDRVKVRQYGKSYKELSGLFMNQDIKAHSGSIWSIKFSPDGHFLASAGEDCVIHVWEVLEWKMIEEKGLEENGVFDPESMLVSTASEGSHREKKLRAKAVHNQRSVSSDRLMVPEHVFALSEKPVITFAGHSEDVLDLSWSKSQYLLSSSMDKTVRLWHVSSTYCLKTFSHSDYVTCIQFNPVNDKYFISGSLDKKVRIWSIQERKIVDWIDLHEMITAACYTPDGQGALVGSHKGKCHVYDISDNMLKHKKQIDLHIKKRKSSQKKITGIQFVPGSSSKVIITSADSRIRVIDSFELVCKFKGFRNTNSQISACSAVKGRYLISASEDSHVYMWRCNDDSEPNTKKGIVSITNTHEHFHCEGVTVAVSWPCASSTMTSREWPENGLSGSELDKDQEMPDAQHQSNIIRNTNPNHNGDTSATWSEELMTPTKQSPRSSASHPMEGDQAPSHSAWGLVIVTAGHEGHIRTFQNFGFPVRV</aaseq>

Gene Sequence

<dnaseqindica>1..1311#3253..3343#3426..3583#3679..3730#4160..4242#4376..4469#4580..5109#ATGAGCGTGGAGGAGGAGGTGGTGGGGGAGGAGGAGGAGGAGGAGCTGTTCTACGAGTCGCTCGATCGCATCCTCTCGTCGTCGGGCTCCTCCACCTCGGCCTCGGACGACGATGGGGACCACCCGCGCCGCCGCCGCGGGTACGACGCGGGGGCGGCGGCCGCGGCCGCGGCGCTCGACCTGTGGACCTCCGAGCCGGCGCCCATCCAGGAGCGACGGCGGCGGCTGCTCCAGCTGATGGGCCTCTCCGGTGACCCGTCGCTCGCGCGATTCGAGAGGGGCCGATCGGCTCCATGCGACGCCGTGGGCCCGCTGCCGTCCTCGCCGGTTGCGCGGTCCAGATCGAGCGGCGCCACGCCGGCATCCGCCGCGAAACCCCCGCTCGGAGGAGGCCGCTTGCGCGGAGCCTCGTCCGATGTGTCAGATGCCACGTTGGAGGCTGTTGAGGAGGACCCAAGGTGCTTGATCAGAAACCTCGACGACGGCAGCGAGTTCCTGGTGAGAGAGGAGTTCGGTCTCCGTGAGGTCGGTACGGGGCGGCAGCTCACCATGGAGGAGTTCGAGTTGTTCATCGGCCGCTCACCCATCGTCCAAGAGCTCATGCGCCGCCAGAGCGTGGTCAATTCCAACTCAAACTCCAATTCCCAAAGTGGCGCTTCCACTCCCATTGAGAGGTCCAGCTCCGGTTCCAGCAATGGTGGGGCGCGCTACAAGCGGCGCAACAGCTGGCTCCGCAGCCTCCGCAGTGCAGCTGGCTCCATGGTTACATACACTCGTGACCGCCGCAGCAGCGACGAGAAGGATACATCCTCAGATAAGGGTGGGCATCGCTCCAGCTCGGCTACGGATGACAGCCAAGATGGTGTTGCACACCATGGCCCGGACCGTGTTAAGGTTCGGCAGTATGGTAAATCCTATAAGGAGCTCAGTGGCTTGTTCATGAACCAGGATATAAAGGCGCACAGTGGGTCCATTTGGAGCATCAAGTTTAGTCCTGATGGGCACTTTCTCGCAAGTGCTGGTGAGGATTGTGTCATCCATGTCTGGGAGGTGTTGGAGTGGAAGATGATAGAGGAGAAGGGGTTGGAAGAAAATGGGGTCTTTGATCCAGAGTCGATGTTGGTATCCACGGCTTCAGAGGGAAGCCATCGGGAGAAGAAGCTGCGGGCAAAGGCAGTACACAATCAGAGATCAGTAAGCTCAGACCGGTTGATGGTGCCAGAACATGTGTTTGCACTATCAGAGAAACCCGTGATAACCTTTGCAGGGCATTCTGAGGATGTGCTTGACCTTAGCTGGTCCAAATCTCAGGTAACACTCAAAATGCTGCTATATGCTTGTCAATTCGAATATGCAAATATTTGTTTTTTTTGGTATACTCCTGTGATACATACTCTGCTGGATTGTAGTATGTGTGCCATCAGACATCAGGATATAGTCACAATAATTAGGTCTTAACTCTTTAAAGTTAAAAACTTATGAAGCTATTGCCAAATTAGCAGTACCAATGTCTCATCTAACCTTGAGAAGTCATCTAGATCTCTGGTATACTGCAATGCTACTGAAAAGGGAAAAAAAGGATGTTGGAGATTTGAACAAATTGGAATTACACAAATTGATTGCTCGCAATGTTCTGTTATTCGCAAATAATTCTGTTAGATGGTTGTTTATAATACATCAGTGCAATTGTACCCTTTCCAACCTCTAAGTCATGTTTTATAAAGCATGCAACTTTTTTGCTGCTTCATGGTGACTTAAGTTTTTCATGTTGAGAACATCTAGAAAATCCAGCACCTGTTGGTCAAAGGATAAAACATTTTGAATGTCAGTTCATTCAGTTCCATATAACTACTAATCTGTTGATTTAGGTCTCTCTTTCACTGCAGTATTAAAAACTTTTCCATTGATAAATAGATTCAAGTTTTTTGATCATCAGGTCAAAGGAGATATTAAGTTTTTCAATAGATTCTGTAGTCTACAGTGTACTCCAATCAACAGAAGATATTTATTCCATCACTAATTAGTATCACCCAGAAGTGATTGAATGTCATGAGCTAAGTAGCTAACTATTTTATGTGTTGACATGACATGAGGTCAGTCTTTATTGTTCAAAGGTGTGATTTAATATTCATTATGTTTTTAGTGGAGTTTCAAAAGGTGAAAAAAATAGTGCACAAGAATATTTATGCACGGTTCTTTGAAAAGAAATATGTCCAGCCCCCAAATGCTAGATGCATGATTACAGTGTATAACTTCAGCAAATTTTGTTAAGCAACATAAAGAGTTAATTGAAGTTTGTCACCTGCCAGATTATTGATGCCAATCTACCAAGCTAGAAGTCAATTTCAATGTGTTGTTTTACCTTTTGCATTAGACAAGTGGGCGCATATAGTATTAACGCAGTAACATTCCTTCAAGATATTGTATGACGTTCATAAGGCTTCTGTATGCTGTTTTAAGCTACCAGTACATGACTTGTGACATGCTCTTATACTGGTCCCCTAATTAGGTGGACATTTAACAGGTTGCTGTTGGGTATGAAATTATTGCTGGTGGGTTTAATGGAGATAAAGTTCATCTAGTACTACAAACTTAAAGCGAGTACAAATGGGCATCTCTTCATGTACCTTGTATAAACTTGTCTGCCTCCAATTCTGCACAAGAAATATAAAGTAGGATAGAAGAGGTCTCTCTTGGAAACAGCATTAAGGTGGATGTAGCTAATTAAGAATTAACCATCTTACTGAAAAACTTAAGGCCTTAAACTGTTAAAAGGTGGACAATCTACTTATAGTATAAAACTTGAACTCAGTCCACATGCAAGGCCAATCAACTCTCCAAGGTTTAGAAATCTAAACTTATGTTATTGCTTATCAGGCTCCGTCACTAAACTTTAGGAGTCTCTTTGGCAGCAAAACTCCGTGCTAGTTTGGCAGTCTGTTCAATTTGTATTTCTGATTATGTAGGCCTGTCCAACTATTTATTAGTGGAAATAGGTTAAGGAGATGATTTGTACCAAATTTTAACACTAGCATATTCCACCTACAAATGTTACGATGGACTCATTTGTCTTCAAAGTGCAGTTTTTCACAACCCAAAGCTAAATTTGTAGCTCAGGGACCTCATCAGACGTTCATGAAAGCTTTAAGGGTGTAGGAATATATTAGCATAATTCATTCATTTTATTATGATTTTGTTGTATTTAACAGTTACCCCAGCACCCCTTATCTCCACTTTTCAATTTCTGTGCAGTACTTGCTTTCATCTTCAATGGATAAAACTGTACGGTTGTGGCACGTGTCAAGCACTTACTGTTTGAAAACCTTCTCCCACAGTGACTATGGTAAGAGCATCGCTTTCAATAGATCAATATCTCTTCCTCACCCCATGTATTGTCCTTCTCTCATATCAATTTCTTGATTCAGTGACTTGCATCCAGTTCAATCCTGTTAATGATAAATACTTCATTAGTGGTTCCCTGGATAAAAAGGTTCGAATTTGGAGTATACAAGAACGCAAAATTGTTGACTGGATTGATCTGCATGAAATGATCACAGCTGCCTGTTATACCCCTGATGGACAGGTTTAACTTGCTTCTTGTTCTACAATTTTTCAGCAGGGGTTTGCTTGCTTTTTTTCATGTTCATTCAAACACCTTGTTTTTTACTCTTTGTGAAGGGTGCACTCGTTGGCTCCCACAAGGGCAAGTGCCATGTCTACGATATTTCTGGTAACCCTCCTCTCTCATTACTTAATTGCTGCACATGTAATCTCCCACATCTATAACTTATTTATTCCAAGACCTGGTACTGATAGTTGGTACTCCCTCCTTTCCAAAAATATAAACACATCTAGCATTTGAAATTCGTACCAATATTTAAGCATTTCTAGCACTTTTTAGTATTACTTGTCCCATTAATCACCTTCAATTCAATTTTTTCCCATCTTATTTCTTACCCCCCAAGCATCCCTCATTTACTGGGAGGCACTAAAGTCTCTTGTCCTTAACCTTATTATGTACTAAACAACCTAGAAATGCTTATATTTTGGAAACGGAGGGAGTATATGCTATGTTAAGCTTCCATCTACTGCCATTGTCATATTATATAAATTGCCTCCTATATCTTGCAAACTTATTTTATTTTTGTCTTTTGCCTAGATAATATGCTTAAGCACAAGAAACAGATTGATCTACATATTAAGAAAAGGAAATCTAGCCAGAAGAAAATCACAGGAATTCAGGTGCTTACTCTGAAGAAGCATTTTAAATATGATACTACTTGTAGATCAATCTGAGTATGAATCAAATCGCACCAGAATTGGTTTTTCATTTTACTTGTTTTGTACCATTACTTATTAGTCGTTCTTCAAATAGTTTGTTCCAGGGAGTTCTTCAAAGGTCATCATCACATCTGCAGATTCACGAATTCGAGTTATTGACAGTTTTGAACTAGTTTGCAAATTTAAAGGTAATTAGTGTTGATCTTATTAATCCTGGCCACACTATTTGTTATTAAATCGTCTCGTATTCAGCTGGTGGTTGTTTTCATTTCCATGTTTGTAACTCATCTTGTTTCAGGCTTTCGTAACACCAACAGCCAAATTTCTGCTTGTTCAGCTGTGAAAGGGAGATATCTTATCTCTGCAAGTGAGGATTCCCATGTATATATGTGGAGATGTAATGATGATTCCGAGCCAAACACAAAGAAGGGCATTGTTTCTATCACAAATACCCATGAACACTTCCACTGCGAGGGTGTGACAGTTGCTGTTTCTTGGCCTTGTGCCAGCAGCACAATGACATCTAGAGAATGGCCTGAGAATGGCCTGTCTGGATCTGAGCTTGATAAAGATCAGGAGATGCCTGATGCTCAGCACCAGAGCAACATCATCAGAAACACCAACCCAAATCATAATGGTGATACATCTGCGACTTGGTCTGAAGAACTCATGACACCAACAAAACAGAGCCCGCGGTCTAGTGCCAGCCATCCTATGGAGGGAGATCAAGCTCCGAGTCATTCGGCCTGGGGCTTGGTGATTGTCACAGCAGGCCATGAGGGTCATATCAGAACATTTCAGAACTTCGGCTTTCCCGTTAGAGTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008687