BGIOSGA008692

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Revision as of 03:19, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008692| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008692, complete gene.| tag = OsI_082...")
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Gene Name

BGIOSGA008692

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008692, complete gene.

LocusTag

OsI_08224

Ensembl Transcript ID

BGIOSGA008692-TA

Ensembl Protein ID

BGIOSGA008692-PA

Length

4906

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27405322..27410227

Sequence Coding Region

27405322..27405889,27405980..27406005,27406830..27407223,27408231..27408319,27408429..27408485
,27408846..27408913,27409016..27409122,27409203..27409273,27410123..27410227

Genome Context

<gbrowseImage1> name=IndicaChromosome02:27405322..27410227 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:27405322..27410227 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCTTCGCCATTCACAAACTCCATCCAGTGATGACGAGACAAGGGCACTTAATGCATTGCTTGATGCTTTCAGTTCTGCCTTTTCGCTTGATGATATAGCTACGGCATATTGCAGAGCAAATGGTGATGTCAACAGAGCTGGTGATCTATTGACTGAACTTGAACATCCTATGGCCAAGAGCAATGAAGTTGACTCAAGTGTTGGGACTATTCATCCCCCAAGTGGTAAGGCAATTGAAGAAAACAGTACAGAGAGTTCAGGCCAAGCAAAATCTCGGGAAAAAATGCAGAAGTCTAGTGCTTCATTTGGCACTGTATCCAGTATGTTAGGAAAGGGATCGACCAGGGCTACAGTACCTTTGATGAATAGAGCATCAGGAAAGGAAAAACCTCCAATGGTTGAGTTACCAGAGTACATGCGGGACGATTTTAATGGGAAAGTTGATAAATCTGATTCTGCACCAAAGAGAGAGACTTTGAATAATAGAGATATTGAGGAATTTCTATTTTCTATGCTTGGAGAAGGATTTAAGCTCAGCATGGACATGATCCGTGAGGTTCTAGGCAGCTGTGGATATGACATTAAGAAGGATGCAGCAGTAGAATGCTCTTCTACAAAGGGAAGCTGCCTAGAATCACAATCCACCTTTAGGTTCTTGCTTCTTCTCTTCATTATTGGTCTGTTCCTATCTTCCCATCATGAAGGCTACATCTATTTTACTTTCATCGACACTCTTCTTTGTAGGAATGGCAGTGCCTATTCTTTGCGAGGCAAGAGACATAGCTCAAGTCAGATTTCTCCAGGAGAGTTGCTAGAGTCAATCTTCACTGTACCTGAAAGATCCGAGGAGGAACCAATAGGAAAACGATATGAACTGGGTGCAAATCGAAACAGAGTACCAGATCAGAAACCAGTTGTAGAACCCCTTGAGGACATCTCATCGGAAACTAACTGTTATCCAGTGAAAGTTATCCTTAGCAAAGAACTAGTTGCACATAATGAGGAAGATTACCAGAACTATCGTAGGGCTGCGAAGCAGCATTGGGATATGATGAAGCAATACTATGAGAAGGCTGTTGATGCTTTTAGGGAGGGTAACCAGAAAGAAGTCGAGTATCTTCTTGGGGAAGGGAAACACTATTACATGATGGCTCGACTGGCTGATGAAAAATCTTCTGCGGAGATTGTCAAGTCGAAAAAAGTAGAGTCAAAGAATGAGTTGTGTCTTGACCTGCGTGGACAAGATCCAGCCAACGTAGCAAATCTCGTGAGACTTCATCTTAGACAGTTGTCTAATATCCCATCTTTTGAGTACTTGAAAGTCATTACTGGTGCTGAGGATGGCAGTTTCAAATCGGCACAAAGAAGAAGAAAGGTGATGAAGTATCTGGAGAAGAAATCGATTGTGTGGACTGAAGAGGAATCCAACCCTGGGACCATCCTCATCCCAATTAATCAGAAGCAGGATCAGCAGGATTAG</cdnaseq>

Protein Sequence

<aaseq>MDLRHSQTPSSDDETRALNALLDAFSSAFSLDDIATAYCRANGDVNRAGDLLTELEHPMAKSNEVDSSVGTIHPPSGKAIEENSTESSGQAKSREKMQKSSASFGTVSSMLGKGSTRATVPLMNRASGKEKPPMVELPEYMRDDFNGKVDKSDSAPKRETLNNRDIEEFLFSMLGEGFKLSMDMIREVLGSCGYDIKKDAAVECSSTKGSCLESQSTFRFLLLLFIIGLFLSSHHEGYIYFTFIDTLLCRNGSAYSLRGKRHSSSQISPGELLESIFTVPERSEEEPIGKRYELGANRNRVPDQKPVVEPLEDISSETNCYPVKVILSKELVAHNEEDYQNYRRAAKQHWDMMKQYYEKAVDAFREGNQKEVEYLLGEGKHYYMMARLADEKSSAEIVKSKKVESKNELCLDLRGQDPANVANLVRLHLRQLSNIPSFEYLKVITGAEDGSFKSAQRRRKVMKYLEKKSIVWTEEESNPGTILIPINQKQDQQD</aaseq>

Gene Sequence

<dnaseqindica>1..568#659..684#1509..1902#2910..2998#3108..3164#3525..3592#3695..3801#3882..3952#4802..4906#ATGGATCTTCGCCATTCACAAACTCCATCCAGTGATGACGAGACAAGGGCACTTAATGCATTGCTTGATGCTTTCAGTTCTGCCTTTTCGCTTGATGATATAGCTACGGCATATTGCAGAGCAAATGGTGATGTCAACAGAGCTGGTGATCTATTGACTGAACTTGAACATCCTATGGCCAAGAGCAATGAAGTTGACTCAAGTGTTGGGACTATTCATCCCCCAAGTGGTAAGGCAATTGAAGAAAACAGTACAGAGAGTTCAGGCCAAGCAAAATCTCGGGAAAAAATGCAGAAGTCTAGTGCTTCATTTGGCACTGTATCCAGTATGTTAGGAAAGGGATCGACCAGGGCTACAGTACCTTTGATGAATAGAGCATCAGGAAAGGAAAAACCTCCAATGGTTGAGTTACCAGAGTACATGCGGGACGATTTTAATGGGAAAGTTGATAAATCTGATTCTGCACCAAAGAGAGAGACTTTGAATAATAGAGATATTGAGGAATTTCTATTTTCTATGCTTGGAGAAGGATTTAAGCTCAGCATGGACATGATCCGTGAGGTTCTAGGTAAACTCGTGCGTGCTATGTGAGGCCATTTCCCCATATTCCACTTGCTTGTTTCAAGCTGTTTTTAACTATCTTTAATTTCTTATGCAGGCAGCTGTGGATATGACATTAAGAAGGTAGTAATCGATCACTACTGTAAAGATTATGTATTTTTTGTGTTGACACTGATTGTCGTATATGCATCAAAAGGGTTTAGAGTTAGGTCATAGGGTGCATAATTCATTTAATGTACCTTCTCATTTGCACACCTAACAGAATCATGGTATTTTATGCAGAGCATGGAGGAACTGATGTCAGTTTCTACAAAAGATACAAGCAAGAAGGCAGAAGACAAACATTATATAGCACAGGCAAGCTTAAATTTTATTTTTGCTACTTCAACAGTGTTATATGACTTTGTTCTTCCTTTGTACTTATGGATTTTGCTTTTGTACCTGTACATGTTAATTTCTCCATGTTGCTCGGCTGAAATATGGTGAAAATCTTAAGTATTTATGCCCCATTATATATGTTATAGTGCTTTTTTATGCAGAACTTCCTTTATGCTTATTTTTTCTGTACATATTTTTTTACTGTTCCATTTTACCTCACCAATTGAAAAATTATGGTGCTTATATATTTTTGTACATGTTATAGCTAGCACTCGTGCACTTATTTATTTTAATTTAATGGTACAGCCCTTTCGTAATTACTAATTAACATAGGACTTGATATGCTGTCTCAGTTAAGATGTTAGATCGCTAGTTCCAAATTTCCAATTGGTAACTGAGCAACAGAATTTGTTATTGGTTAATGCTTCGAATTTTTTCAATACAGCTACTATTGTATGTGAAGGGAGTCAGACCACTCTGTTATATTAAGCAACAATATGCATGTTTCATGGGTTTCATATTGTATAAACATTTTAATTATATCCACCCTGTGTCATGTAATGGTGCAGGATGCAGCAGTAGAATGCTCTTCTACAAAGGGAAGCTGCCTAGAATCACAATCCACCTTTAGGTTCTTGCTTCTTCTCTTCATTATTGGTCTGTTCCTATCTTCCCATCATGAAGGCTACATCTATTTTACTTTCATCGACACTCTTCTTTGTAGGAATGGCAGTGCCTATTCTTTGCGAGGCAAGAGACATAGCTCAAGTCAGATTTCTCCAGGAGAGTTGCTAGAGTCAATCTTCACTGTACCTGAAAGATCCGAGGAGGAACCAATAGGAAAACGATATGAACTGGGTGCAAATCGAAACAGAGTACCAGATCAGAAACCAGTTGTAGAACCCCTTGAGGACATCTCATCGGAAACTAACTGTTATCCAGTGAAAGTTATCCTTAGCAAAGGTATATTGTTACACACTTCTGCTTCCATATTTTTCGCTTTTCTCTGAGGAATATACTGGCGTTATATTCTGTCCCTTTCATCTTTTATTGTAATTTCTATGCTTTTTTGCATCAACATTGTATCCTACAACAAAATTTACTGTTTAGACTGCACTATATGAGATACCTTTCAAAAGTAGTTTGCACTCTGAATTACATAATTCTGTTCAGTAAGCCAAACATAGAGTTCAAGATGATATTGTGTGTATAGCCATGTATTCTTGATACATAATCAGGACAAACATCAATACCAAGCTCAGTTATATTTCTACGTGATATCACATTTCTTTAGCCTGCACTGAACATTTGTGGTAGAATTCTGTCTCACAAGTCCTCTTTTAACAATCTGTGATGGATGGGTAAAATTGTAAATGTAGTTTACCTACTGTATGTTGAACCATTTGACTTATTTAGAGTTTGGACATAGGAGTATCATGTCCATCACAGTATTAGATCTATATGGTTATTCTGGATGGTTATAGACCTACAGAATGATAGTATTAAAGATTTGCAGTGATGTATCCACTGGATTTTTCGCTATTAGTTGGTTTGTACATGCTTTGCATCTTAGTACTGATGTTAGCAGATTTGTTTGAACTAAGTCAAGGACAACTATGGGAACTGTTTATGTTTTCCTTTTTCTTAATGAAATCTTTCAAACTATGCAAGTCAGAAAGTGATATCCATTGTGTTCTATATTTTCATGAAGGATACAGAGGACACAATTGTGATTACAAGCAGAAAATATAGTTTGAATTAATATAAGCTTTTGATATTTTTTAATCAAAACCTTTTGATAATTTGGTGATAAAAACTGCTAACATGAAGCTTCTAATCGACTGGTCTCTTAAGTCTTTACACTCTGCCTTAATGCAAGATGTTTGTCATAATTGAGATTTTATCATCCTGTATTCCATGAAAAGTTATAATGCATTATTTGTTTTGAAATTGTTTTGGTTTGTATCTAGAACTAGTTGCACATAATGAGGAAGATTACCAGAACTATCGTAGGGCTGCGAAGCAGCATTGGGATATGATGAAGCAATACTATGAGAAGGTATGGGGGCTTCATGATGATTCTTTATGCTTTGATGTTTATTTCGTTTTCTGCAAACAGATCGTTTTTTGTTTTTTCCATGTTGAAGAATTTTCAATGAAAATTCCAGGCTGTTGATGCTTTTAGGGAGGGTAACCAGAAAGAAGTCGAGTATCTTCTTGGGGAAGTAAGTAATCATTTTCTTGAGCAAGAACTAGAGGACATTATTTAATATTATAGTGGGGTTTTGAACCAGGGGTCTTATGCATTTTTGTCAAAAACGAACCTATTGGTATATTGATAGAGGAATACATATATCTTGGCCAGCAGAGTTATTATGTATGACAGTATGAGTGTATGAGTGTGACTATGGGCATCGTCATTACGTTTGAATGTATGATTATTTGGCCTGTCTTTGAGCTGCTTCTATTCTCTAAGTAAAAATGTACTACATAGAAACATTTGTCAGCTTGTATATGCTCATCTGTTGATGTAATGGCCACTTCTAAAAAAACGACTAACTGGCTATTCTTTGTTGGATATCAAGGGGAAACACTATTACATGATGGCTCGACTGGCTGATGAAAAATCTTCTGCGGAGATTGTCAAGTCGAAGTAAGTGCGCTTCCTTTCTGCATTATAGCTGAAATTAATCTGTTACGTTTGTTGTTTCTTTTTAGAAACCTTACATTACCAAGTTTATGGGTCTTCTTGCAGAAAAGTAGAGTCAAAGAATGAGTTGTGTCTTGACCTGCGTGGACAAGATCCAGCCAACGTAGCAAATCTCGTGAGACTTCATCTTAGACAGTTGTCTAATATCCCATGTGAGATGAGCACATAAATCTTTTAATTTCTTGATATATATTTTTTTGCGTAGTCTTATCTAATTTACCTGATGTTGTAGCTTTTGAGTACTTGAAAGTCATTACTGGTGCTGAGGATGGCAGTTTCAAATCGGCACAAAGAAGAAGAAAGGTGATTTTCTCAAAGTTGCTTTACTACTACTGAATTTTCTGCTTCATCTGCTAGTTATCTGTGTGCATGACTCAGATACCAATTATTAGGCTGCACTATGTTCTTTATCCAAACTACAAATATCCACCTAGTTATCTTGGCTAATATAAGCATCTAGTGGCATTTTGCTCTATAAATCTGACATCATTAGTTCATTGCACTATTTAACTCAGTAATGGTTATGACCAGTCCTTTAGCCAAATTATGGATCAAGAAATTCAAAACCACACATGTAAAAATAAAAGAGAATAAAATAAAACAGAAGTACACCAAGGGCATGCTAAACTTTAAAATGAAGTTGTAGGTATGGGCGGTACAGAGTGATTTCCTCAGCTGTTTTAAAGATGTGGAAGCTTGCATGCATTCATATGTTCAGTGTTTGTTGTCCTCTGCTTTGTTCTTGTCCTTTTTTGGCAGCAAGATTTTTAGATTAGTGGACTTGTGCCTAAGTTGAACGGTTTCTTTATTTATCAATTTGCTGGTTGAGTACTCTGTAGGCTTTAGTTTTTCCATTGTGGTAATAACACTGTAGCGTTTGTTGGTATGATGCGAAAAGCGTAATATGCTTGAATCTCTGCATGTACTTTTGTTAAGAGCTTTTGCAATTACTACTCTTTGAACTCTGGAATCTTTTGCCGAAGTTAAGACTTAGGAGGCATTAATGCGTAATTCCTTGGTTTGTACTATATGACAAGGAGAGTGGCTGTTTTTGACTGCAACGTGTTGTGCGAAATACCACGACTTTAGAATTGTAACTACGTGCTGCACATACATGGTATTGAACTGTCTTTACGTGATGAATTTGGCCAGGTGATGAAGTATCTGGAGAAGAAATCGATTGTGTGGACTGAAGAGGAATCCAACCCTGGGACCATCCTCATCCCAATTAATCAGAAGCAGGATCAGCAGGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008692