BGIOSGA008721

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Revision as of 03:20, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008721| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008721, complete gene.| tag = OsI_082...")
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Gene Name

BGIOSGA008721

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008721, complete gene.

LocusTag

OsI_08286

Ensembl Transcript ID

BGIOSGA008721-TA

Ensembl Protein ID

BGIOSGA008721-PA

Length

5478

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27987402..27992879

Sequence Coding Region

27987402..27988286,27989402..27989467,27989561..27989695,27989806..27989871,27989953..27990138
,27990214..27990300,27990422..27990535,27990628..27990734,27990811..27990919
,27991652..27991777,27991865..27992185,27992496..27992619,27992755..27992879

Genome Context

<gbrowseImage1> name=IndicaChromosome02:27987402..27992879 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:27987402..27992879 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCGCCTCCGCCGCCGCCGAAACCCTCGCGGCGGCGTCGCTCCCCGTCGCGTCGCCTTCGCGGTCGCTGCTGCGGCCGCTCCCCAGGAGAGCGTCCGCGGGAGGCGGCTGCTCCGCGTCCGTACGAATCTCCGCCGTGCCGCCGCGGGGGCTCGGGTTCGCGGTCGTCCAGCGCCGCGTCCTCCGCCGCCCGCCGGCGGCGCGCGCCAACGTCGAGCGCGAAGGGGACGGGGCCGAAGCGTCCGGGCCAGGAGAGGCGTCGTCCTCCTCCTCTGGAGATGGGGACCGCGACGGGGCGGCGGCGGCGGCGGAGGCAGGAGGTGATGGCGCCAGCACGAGCACCACGAGCGCGGCCGCGACGCCTCCGCAGCCGCCCTCATCGAAGAGGGGGGAGAACAAGTGGCGGCGGAAGCTGATTAAGGGCGGAGGCGTTGGGCGGTGGCTTTGGGAGCCCATAGTTCAGGGGAGGGAAATGGGGTTCCTCCTGCTCCAGCTTGGGTTCGCCATATTCGCGCTCCGAATGCTGCGGCCCGAGATCGCGCTGCCTGGCTCAGAGCCCCGGCCACAGACAACGTACGTCAGCGTCCCATACAGCGACTTCCTGGCGAGCATAGACAAGAACCAGGTGAAGAAGGTCGAGGTGGACGGGGTGCACATCATGTTCAGGCTCCGTCCTGAGGTTGAGGCCCGTGCAATGGAGCAGCCACAGGTGCAGCGTGGAACAGATTCTGTTGCTGATAATGCTGGAGTTCCAAGGCGAATTGTCTTCACAACAACACGTCCAGTGGACATTAAGACACCATATGAAAAAATGGTGGAGAATAGTGTTGAGTTTGGGTCGCCGGACAAAAGGTCTGGTGGCTTGCTCAATTCGGCTTTGGTGGCTCTTATTTATGTTGTATTAATTGCTGTAGTTCTGCAGCGATTGCCAATAAGCTTTTCTCAGCATTCAGCAGGCCAGCTGAGGAATCGGAAGAATTCAAACTCTGGTGGGGCCAAAGTTTCAGAAAGTACCGATATAGTTACATTTGCTGATGTGGCTGGAGTAGATGAGGCCAAAGAAGAGCTGGAAGAGATTGTGGAGTTCCTAAGGAACCCAGAAAGATATATTCGTCTTGGTGCGCGACCTCCACGAGGTGTCTTGTTGGTGGGCCTTCCAGGAACTGGAAAGACGCTTCTTGCAAAAGCTGTCGCAGGGGAAGCTGAAGTCCCATTCATAAGTTGCTCTGCAAGTGAATTTGTGGAGTTGTATGTAGGCATGGGAGCAGCTCGAGTGCGTGACCTATTTGCTAGAGCTAAAAAGGAATCTCCTTCGATTATTTTTATTGATGAGATTGATGCTGTGGCAAAAAGCCGTGATGGCCGTTATCGTATCGTCAGTAATGATGAGCGAGAGCAGACACTAAATCAATTACTCACGGAAATGGATGGATTTGACACCAACTCAGCTGTCATTGTACTTGGAGCAACAAACCGAGCAGATGTTTTAGATCCTGCCCTCCGACGCCCTGGGAGATTTGACCGTGTAGTTATGATTGGAAGAGAATCTATTCTGAAAGTTCATGTGAGCAGAAAGGAGCTTCCGCTTGGTAAAGATGTAGATCTTAGTGACATTGCTGCAATGACAACTGGTTTTACTGGGGCAGACCTTGCAAATTTAGTAAATGAAGCTGCTTTGTTGGCTGGGAGATCAAATAAAGAAATAGTGGAAAAAATTGACTTCATCTGTGCAGTGGAGCGCTCTATTGCTGGCATTGAGAAAAAGCATGCAAAGCTGAAGGGTAATGAAAAGGCTGTTGTTGCACGGCATGAAGTTGGTCATGCCGTTGTGGGAACTGCTGTAGCAAACCTATTGCCAGGGCAGCCACGTGTGGAGAAATTGAGTATATTGCCAAGGTCAGGTGGTGCATTGGGCTTTACGTACACCCCTCCCACAACAGAAGATAGATATTTGCTCTTTGTTGATGAACTGCGTGGACGTCTAGTAACACTTTTGGGTGGAAGGGCAGCAGAGGAAGTAGTACTGTCAGGGCGTGTTTCTACTGGAGCACTTGATGACATAAGGCGTGCCACTGACATGGCATACAAGGCTGTAGCAGAATATGGTCTTAATCAGCGCATAGGTCCGATATCGGTGGCAACATTGTCAAATGGTGGGCTAGATGAATCCGGAGGCTCTCCATGGGGAAGGGATCAGGGCCATCTAGTTGACCTTGTCCAGCGGGAAGTAAAAGCCCTTCTTCAATCAGCCCTTGATGTCGCTCTTTCAGTTGTCCGTGCTAATCCTACAGTTTTGGAAGGCCTTGGAGCATATTTAGAAGAGAATGAAAAGGTTGAGGGCGAGGAGCTTCAAGAGTGGCTCAAGTCGGTTGTTGCACCAAAAGAATTGACCTCATTTATAAGAGGAAAGCAAGAGCAGGTTCTTCAGTTGGAAGCAGGCTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MASASAAAETLAAASLPVASPSRSLLRPLPRRASAGGGCSASVRISAVPPRGLGFAVVQRRVLRRPPAARANVEREGDGAEASGPGEASSSSSGDGDRDGAAAAAEAGGDGASTSTTSAAATPPQPPSSKRGENKWRRKLIKGGGVGRWLWEPIVQGREMGFLLLQLGFAIFALRMLRPEIALPGSEPRPQTTYVSVPYSDFLASIDKNQVKKVEVDGVHIMFRLRPEVEARAMEQPQVQRGTDSVADNAGVPRRIVFTTTRPVDIKTPYEKMVENSVEFGSPDKRSGGLLNSALVALIYVVLIAVVLQRLPISFSQHSAGQLRNRKNSNSGGAKVSESTDIVTFADVAGVDEAKEELEEIVEFLRNPERYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGAARVRDLFARAKKESPSIIFIDEIDAVAKSRDGRYRIVSNDEREQTLNQLLTEMDGFDTNSAVIVLGATNRADVLDPALRRPGRFDRVVMIGRESILKVHVSRKELPLGKDVDLSDIAAMTTGFTGADLANLVNEAALLAGRSNKEIVEKIDFICAVERSIAGIEKKHAKLKGNEKAVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYTPPTTEDRYLLFVDELRGRLVTLLGGRAAEEVVLSGRVSTGALDDIRRATDMAYKAVAEYGLNQRIGPISVATLSNGGLDESGGSPWGRDQGHLVDLVQREVKALLQSALDVALSVVRANPTVLEGLGAYLEENEKVEGEELQEWLKSVVAPKELTSFIRGKQEQVLQLEAGS</aaseq>

Gene Sequence

<dnaseqindica>1..885#2001..2066#2160..2294#2405..2470#2552..2737#2813..2899#3021..3134#3227..3333#3410..3518#4251..4376#4464..4784#5095..5218#5354..5478#ATGGCCTCCGCCTCCGCCGCCGCCGAAACCCTCGCGGCGGCGTCGCTCCCCGTCGCGTCGCCTTCGCGGTCGCTGCTGCGGCCGCTCCCCAGGAGAGCGTCCGCGGGAGGCGGCTGCTCCGCGTCCGTACGAATCTCCGCCGTGCCGCCGCGGGGGCTCGGGTTCGCGGTCGTCCAGCGCCGCGTCCTCCGCCGCCCGCCGGCGGCGCGCGCCAACGTCGAGCGCGAAGGGGACGGGGCCGAAGCGTCCGGGCCAGGAGAGGCGTCGTCCTCCTCCTCTGGAGATGGGGACCGCGACGGGGCGGCGGCGGCGGCGGAGGCAGGAGGTGATGGCGCCAGCACGAGCACCACGAGCGCGGCCGCGACGCCTCCGCAGCCGCCCTCATCGAAGAGGGGGGAGAACAAGTGGCGGCGGAAGCTGATTAAGGGCGGAGGCGTTGGGCGGTGGCTTTGGGAGCCCATAGTTCAGGGGAGGGAAATGGGGTTCCTCCTGCTCCAGCTTGGGTTCGCCATATTCGCGCTCCGAATGCTGCGGCCCGAGATCGCGCTGCCTGGCTCAGAGCCCCGGCCACAGACAACGTACGTCAGCGTCCCATACAGCGACTTCCTGGCGAGCATAGACAAGAACCAGGTGAAGAAGGTCGAGGTGGACGGGGTGCACATCATGTTCAGGCTCCGTCCTGAGGTTGAGGCCCGTGCAATGGAGCAGCCACAGGTGCAGCGTGGAACAGATTCTGTTGCTGATAATGCTGGAGTTCCAAGGCGAATTGTCTTCACAACAACACGTCCAGTGGACATTAAGACACCATATGAAAAAATGGTGGAGAATAGTGTTGAGTTTGGGTCGCCGGACAAAAGGTCTGGTGGCTTGCTCAATTCGGCTTTGGTAAGGCACTACAGCTGAAAAATAAATTTGTTATACGTGTGGTATTTTTAGGCTGGATATCTTAGTATAGGGAAAGCAATAAGCACATCAGAACATAGATAGGGAAGAATGCAGTATAGCATGTAGAATGATGGTTATTGTAGGACTGGTGTGGTGTTGAGTTTTGAAATGGAGAGATCAATTAGTTGCAGTGACTTATGCAAACTAGTTATTTTGTGGCTTATAGCACTATATACAGCATACTTACCACTGGCTAGCCATGAAGGAGAAGAAAATGCTGTGTGTTTAACTGTTTACTATTAGCATGAAGGCTCGAGATATTTGCAACTGCGCGAGAGCATATAATTCATGTTAGTTTCAACTTATGGAAAATCAGAAGCATCATTGCTCAATTTGCTAACAGAAGACTCAGAAATCACATATTCCATGGTGTTTGGTGATAGTTGAAATGATGTTTTATAGACATGGTAGTTCAGAGTTAAAAGTTTACTATATTTGTGCCCTGGTCACAGATAAGCCGATTATTACAAGAACATAAATTATAGTCAGTTGCATATCACAAAAAATCCTCGCATCAATATGCCAAATAAATCTTCGGATATGACCTGAAATAATGGAATTATCTGAGGATTCATGTGGGTATTTCTACATGCAGTTGTAATATTACGCAGTAGATTGAGTTTCTAACCTGACTTCAAATGCAAATTGAAAGCACAACTTTTAACATTAAGACTTTAAAATCACTAGTACTTTTCTTCGTTATTATCATATTCCCCTCGTCCCTTCATCCTTGTGAACTCTTCATTCATCACCACTGTTGTATACCTTGAATGAGAAAACAGGATGGAATGATTTATGGATTGGTTCACACGAAAAACTGAACTTCCAGTTGAATGTTGGAACTTACAGATCAATGAATTAATGGGGTTTTGTTAAAACTTAGTATGGCAAAATGGAATCCTAAGTAGAAAATAAGTTACAGAGCATACCATTTATCTGAGACAGCACTGTTTTGCTGTTTCATTTCGTTCCTAACTTCTTCTTTATTAGAAATATACAGCTCTCTCTCCTAGCTGCGTTTTTTTGTCCTAACCATGCCCTTATTTTTTTTGCAGGTGGCTCTTATTTATGTTGTATTAATTGCTGTAGTTCTGCAGCGATTGCCAATAAGCTTTTCTCAGGTACTGATGAATGCACTTCATTACTTCAATCAACTAATGAACATACTTGGTTATATCTTTAATAGATATAATATAGTTTCTTGTGTATATCAGCATTCAGCAGGCCAGCTGAGGAATCGGAAGAATTCAAACTCTGGTGGGGCCAAAGTTTCAGAAAGTACCGATATAGTTACATTTGCTGATGTGGCTGGAGTAGATGAGGCCAAAGAAGAGCTGGAAGAGATTGTGGTATGTGTTTTATGCTCAATGTTACTGGTATATGCAGTTATCCACTGATATTATGCCTTATCTGTTGACTCGAGGGGAATAAGCTAGTTATATCTTAATCTTATGTTCAGGAGTTCCTAAGGAACCCAGAAAGATATATTCGTCTTGGTGCGCGACCTCCACGAGGTGTCTTGTTGGTCAGTTCTGCAGTCATTTAAGTAATGATGAATGTTGCTGGACTAGAGTTTTTGTACTATGATGTAATTCATTATTTACAGGTGGGCCTTCCAGGAACTGGAAAGACGCTTCTTGCAAAAGCTGTCGCAGGGGAAGCTGAAGTCCCATTCATAAGTTGCTCTGCAAGTGAATTTGTGGAGTTGTATGTAGGCATGGGAGCAGCTCGAGTGCGTGACCTATTTGCTAGAGCTAAAAAGGAATCTCCTTCGATTATTTTTATTGATGAGGTAACCTACTGTTTGAGGACAAAAATCTAGTTTTATGTGCTTAAATGTGTGATAACTAATTGCATTTCTTTGTAGATTGATGCTGTGGCAAAAAGCCGTGATGGCCGTTATCGTATCGTCAGTAATGATGAGCGAGAGCAGACACTAAATCAATTACTCACGGTATTGATAGTAAAGAGTCCTTTAATCTTGTGATTCTGACTATATTTTACTCACATACACACATCTTTAGTTGGGGTCCAATTGAATTATCTTCGTGTTAATTTTCTCTGAATCTACCTAGGAAATGGATGGATTTGACACCAACTCAGCTGTCATTGTACTTGGAGCAACAAACCGAGCAGATGTTTTAGATCCTGCCCTCCGACGCCCTGGGAGATTTGACCGTGTAGTTATGGTAAATTGATCTTCTCAATAAAAAAAAGTGATACTGGATCTCTGTTGTCTGAGGTCATAGATATTTATGTGATAGGTTGAAGCTCCCGACAGATTGGAAGAGAATCTATTCTGAAAGTTCATGTGAGCAGAAAGGAGCTTCCGCTTGGTAAAGATGTAGATCTTAGTGACATTGCTGCAATGACAACTGGTTTTACTGGGTGAGAATTCTTCTGCTCCTTTTTAATAAGCATGCAGCATTTTCAGTTGATTTGACATTCTTTTTACACTATACAGGGCAGACCTTGCAAATTTAGTAAATGAAGCTGCTTTGTTGGCTGGGAGATCAAATAAAGAAATAGTGGAAAAAATTGACTTCATCTGTGCAGTGGAGCGCTCTATTGCTGTATGTTCCTTTATCTCAAATTCGTTTGCTATTATTGTTTGCTAAGGTCATTTTATACAAGGAAATTTCGTCTGCTTGGTTTCTTATTTCTATCCTAGTTTTCTTAACCGATTTACAAGAATATGTGGAATGGCAACTTATACAAGACAAATATCTAGATATCCATTTTGAAACTATTCTTGACTTGTATTATGTCCACTAAATGCGTTCGGTTTCTTGCAATGAATTTATGTCTATTTCCACCCTTGCTGGTAGTCAAAATTTTTAAAGTTTTTGAAATACCGTTCAACTTGTGAGTTTTTTGATAGATTTTGGGGCCGTTTGGTAGGGCTCCAACTCCTAAATTTAATTCCAAGAGTTGGGTCTGAAGTGGATTTGTGGAGCTGCCTAAACCCAGCTTCACCTCTCTAGTTCATTTTGTGAGAGCTGAAACTGTTTGGTTGGGCTCCAGCTCTAGGAGCGGTGGAGTTTGAGCTAGAGATATGCCAAACAGGCCCTTTATGGATTTTCTTTATTTGATAATGGGGACGCCATAAGGTCATATATGATGTTACTGTCCTCATTCTTTTCCTACATGCTGTCCATTGATTCAGCACTGAAGGAATGGCCCTTTTGTTGATCCTTGCCCTAGTTCAATATTGTTATGGAAGATGTATCTGTTCCAGCTGTTAGAGTAGACATTGTTTTACTTCCACATTGTTTCCTGGAAACTAACTGGAATTATTTTCTTAGGGCATTGAGAAAAAGCATGCAAAGCTGAAGGGTAATGAAAAGGCTGTTGTTGCACGGCATGAAGTTGGTCATGCCGTTGTGGGAACTGCTGTAGCAAACCTATTGCCAGGGCAGCCACGTGTGGAGGTTTGAACACAAGCAACTATCGATAGAACAGTTTAAGAAAATGTTCGTATTGGGCTTACATTTTAGTGTTGTTCTTTTTTCCACCAGAAATTGAGTATATTGCCAAGGTCAGGTGGTGCATTGGGCTTTACGTACACCCCTCCCACAACAGAAGATAGATATTTGCTCTTTGTTGATGAACTGCGTGGACGTCTAGTAACACTTTTGGGTGGAAGGGCAGCAGAGGAAGTAGTACTGTCAGGGCGTGTTTCTACTGGAGCACTTGATGACATAAGGCGTGCCACTGACATGGCATACAAGGCTGTAGCAGAATATGGTCTTAATCAGCGCATAGGTCCGATATCGGTGGCAACATTGTCAAATGGTGGGCTAGATGAATCCGGAGGCTCTCCATGGGGAAGGGATCAGGTCTGTCTCAAAATGTCCCTACTCCTTTACTTGAATTTTTTATTTGGAATTTGGACATCTCCGCGGGTACTTTTTTTTAACTTGTAGAAAGTCAAGTTCTTTTTTAGAAAGATTACCCGTCTTGTCCACGCCTACTAATCAGTCCACATTTTGAACAAATTTTACGAACAGAAGCTCTTTTTTTCATGTTTCCGTATTCCTTTATTAAACTATGAATTTACTCTTTTGGAAAAAAAAAAGTCTCTTTGCCTGACAAATGCGTAAGCTACCATCTGCATGTATTGTGCTCACACTGCAAAACTAATGACAGGGCCATCTAGTTGACCTTGTCCAGCGGGAAGTAAAAGCCCTTCTTCAATCAGCCCTTGATGTCGCTCTTTCAGTTGTCCGTGCTAATCCTACAGTTTTGGAAGGCCTTGGAGCATATTTAGAAGGTAAAAAACTAGACCAAATTATCAGGTTGCATATGTTATTGTGGCTCTCCTTTCTATGATGGGTTTTGCTTCATTAGATTAAAAATGAAAACTGTTTAACCTATGCATAACGGCTTTCTTCTCTACCCCATTCAGAGAATGAAAAGGTTGAGGGCGAGGAGCTTCAAGAGTGGCTCAAGTCGGTTGTTGCACCAAAAGAATTGACCTCATTTATAAGAGGAAAGCAAGAGCAGGTTCTTCAGTTGGAAGCAGGCTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008721