BGIOSGA008724

From RiceWiki
Revision as of 03:20, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008724| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008724, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008724

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008724, complete gene.

LocusTag

OSJNBB0012J10.18

Ensembl Transcript ID

BGIOSGA008724-TA

Ensembl Protein ID

BGIOSGA008724-PA

Length

2553

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28061480..28064032

Sequence Coding Region

28061480..28061587,28061738..28061851,28061974..28062195,28062299..28062373,28062466..28062579
,28062679..28062929,28063466..28063541,28063676..28063762,28063847..28064032

Genome Context

<gbrowseImage1> name=IndicaChromosome02:28061480..28064032 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:28061480..28064032 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACGCGCTAGCCGCCACCAGCCGCAACTTCCGGCAGGCGGCGAGGCTACTCGGCCTCGACTCCAAACTCCAGAAGAGCCTTCTGATCCCTCTCCGCGAGATCAAGGTTGAATGCACCATCCCCAAAGACGATGGCACCTTGGCGACGTTTGTTGGGTTCAGAGTGCAGCATGACAATTCCCGTGGCCCGATGAAAGGCGGCATCAGGTATCACCCTGAGGTTGACCCAGATGAAGTGAATGCACTTGCTCAGCTGATGACATGGAAGACTGCTGTTGCTGCTGTGCCTTATGGTGGAGCAAAGGGAGGCATTGGGTGCACTCCTGGTGAACTGAGTAGAAGTGAACTTGAGCGTTTAACGCGCGTGTTTACCCAGAAAATTCATGACCTCATTGGGATCAATACAGATGTTCCAGCCCCTGACATGGGAACAAATGCACAGACCATGGCATGGATACTAGATGAATACTCAAAGTTCCATGGCCACTCCCCAGCTGTTGTCACGGGAAAGCCAATTGATCTTGGAGGATCCTTAGGAAGAGATGCTGCGACTGGCCGCGGTGTTATGTATGCTACTGAGGCTTTATTGACTGAATACAGCGATCATTTCAGGATCAACCTTGTTATCCAGGGTTTGGGGAATGTTGGTTCTTGGGCAGCCAAGCTCATCCATCAGAAAGGTGGCAAGATAGTTGCAGTTGGAGATGTAACAGGTGCAATCAGAAATAAATCCGGGATAGACATACCTGCTCTCTTGAAGCACAGGAGCGAGGGTGGATCTTTGGAGGACTTCTACGGTGCAGAAGTTATGGACGCTGCAGAGCTGCTTGTGCATGAATGTGATGTTCTCGTCCCGTGCGCCTTGGGTGGTGTTCTCAACAGAGAAAATGCAGCTGAAGTGAAGGCCAGATTCATAATTGAGGGGGCTAATCATCCCACTGATACAGAAGCTGATGAGATACTCGCAAAGAAGGGAGTCATTGTGCTGCCAGATATCTATGCAAATTCAGGCGGCGTGGTCGTCAGCTATTTTGAGTGGGTTCAGAACATTCAGGGCTTCATGTGGGATGAAGAGAAGGTGAACAGGGAGCTCCAAAAGTACATGAAGAACGCTTTTCAGAACATCAAGGACATGTGCAAATCCCAAAACTGCAACCTTAGGATGGGGGCATTCACTTTGGGGGTTAACCGGGTTGCAAAGGCTACTCTGTTGAGGGGATGGGAGGCATGA</cdnaseq>

Protein Sequence

<aaseq>MNALAATSRNFRQAARLLGLDSKLQKSLLIPLREIKVECTIPKDDGTLATFVGFRVQHDNSRGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAVPYGGAKGGIGCTPGELSRSELERLTRVFTQKIHDLIGINTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVMYATEALLTEYSDHFRINLVIQGLGNVGSWAAKLIHQKGGKIVAVGDVTGAIRNKSGIDIPALLKHRSEGGSLEDFYGAEVMDAAELLVHECDVLVPCALGGVLNRENAAEVKARFIIEGANHPTDTEADEILAKKGVIVLPDIYANSGGVVVSYFEWVQNIQGFMWDEEKVNRELQKYMKNAFQNIKDMCKSQNCNLRMGAFTLGVNRVAKATLLRGWEA</aaseq>

Gene Sequence

<dnaseqindica>1..108#259..372#495..716#820..894#987..1100#1200..1450#1987..2062#2197..2283#2368..2553#ATGAACGCGCTAGCCGCCACCAGCCGCAACTTCCGGCAGGCGGCGAGGCTACTCGGCCTCGACTCCAAACTCCAGAAGAGCCTTCTGATCCCTCTCCGCGAGATCAAGGTACCCGATTCCCTGCTTGCATTGCATAGATTGATTGATAGATGCTCTGTGTGATTTGTGTGATTTCCTGCTTCTCTGTTTCTCGCAATTTGATGCTTGATTCAGTGGTTCACATCGGCTTCACTGAACCATTGGCATTTGTGTGTTCAGGTTGAATGCACCATCCCCAAAGACGATGGCACCTTGGCGACGTTTGTTGGGTTCAGAGTGCAGCATGACAATTCCCGTGGCCCGATGAAAGGCGGCATCAGGTATCACCCTGAGGTGAGGAGATGATGTTTTTCTGCCAATTCCTTTAGAAACTACAAAATTTCTTGCGTTCCAAAAGAGTAGGTCTTTAGAAGGATCGATTAGTATTGTAACCATCAAGGTTTCTCCCTGGACAGGTTGACCCAGATGAAGTGAATGCACTTGCTCAGCTGATGACATGGAAGACTGCTGTTGCTGCTGTGCCTTATGGTGGAGCAAAGGGAGGCATTGGGTGCACTCCTGGTGAACTGAGTAGAAGTGAACTTGAGCGTTTAACGCGCGTGTTTACCCAGAAAATTCATGACCTCATTGGGATCAATACAGATGTTCCAGCCCCTGACATGGGAACAAATGCACAGGTGAGTCATCCAATTCCATCTGCCTTATAATTTATCATCTGCTGTCTTCATACTCTGCTTCTTCTTTACATGTTTCTGAAAATTTTATTTTCAACTGTCACAGACCATGGCATGGATACTAGATGAATACTCAAAGTTCCATGGCCACTCCCCAGCTGTTGTCACGGGAAAGCCAATTGTGAGTTTACATGAGTCATGAAAAACCTATTTCATCTAGACAAACTCTTCATATTTTATCATTAACTTTACTTATTGTCTTATTTGATATAGGATCTTGGAGGATCCTTAGGAAGAGATGCTGCGACTGGCCGCGGTGTTATGTATGCTACTGAGGCTTTATTGACTGAATACAGCGATCATTTCAGGATCAACCTTGTTATCCAGGTAACAATGACAACATTATGATGACTTAAACGATATGTTAATATTAGGATGCCAAAAATGTATAACTTGTACTTGATCAACTACTAATCTTTTCTGCAGGGTTTGGGGAATGTTGGTTCTTGGGCAGCCAAGCTCATCCATCAGAAAGGTGGCAAGATAGTTGCAGTTGGAGATGTAACAGGTGCAATCAGAAATAAATCCGGGATAGACATACCTGCTCTCTTGAAGCACAGGAGCGAGGGTGGATCTTTGGAGGACTTCTACGGTGCAGAAGTTATGGACGCTGCAGAGCTGCTTGTGCATGAATGTGATGTTCTCGTCCCGTGCGCCTTGGGTGGTGTTCTCAACAGGTAAGAACGGCGCATTGCTGCATTTGATAAAAGAATCTCGTATTATGGTAATTTGATTGATGTTTTTGCTACATTTTCACCTGGTTTCCAATATCTCATTATTAGGCCGTAGTGTTTCCAGAGAAATATGTAGTACAAATTTCATATGTAGCGCAAACCTAAAAACTAACGTAGGATCCAATTAAAAATAAACCGTCTAAGATATCCTGAGTAAAGCATTTACTCCCAATAAAACTTTTTACTTATTATTAAATCTGAGAGTAAAAGTTTTACTCGGGGTGATGAGGACAAATCTTAGACGTCAGTTTTTTTTTATCCTATGGTAGTTTCTAGGTTTGTAAACTGCAAATGAGATTTGCTTTATATTTTCCTGTGCTTCCATTCATATAAATATTGGCACCTTGGTATTTGGTAGTGTGTGCGGTGTCATGATACCAAAAATTGTTAGCTGTGTATTGTGGAGTTTTCTGTTTTAGTTTTCTACCTTAGTCTAGCTGCATGTTGCAGAATTGCTAATTCACATGAGTTATCTGCAGAGAAAATGCAGCTGAAGTGAAGGCCAGATTCATAATTGAGGGGGCTAATCATCCCACTGATACAGAAGCTGATGAGGTAAGCTCAAAACCACAATGAGCTCTCTCTCTCTCTCTCTCTCTCCCCTTCAAGGAACATGAATATCCTCAAGACATCAAGAATGATAATTTATTTATAATTCTAATCTTTTGAGCTTACTCTCTGCCTTGAAGATACTCGCAAAGAAGGGAGTCATTGTGCTGCCAGATATCTATGCAAATTCAGGCGGCGTGGTCGTCAGCTATTTTGAGTGGGTTCAGGTAATAGAACAGAAGATTTTGTGCCTTCTTTGGATCTTTCCCATGAATCTAATGGCATATGTTTGTGCTACGCCTATGGTGCAGAACATTCAGGGCTTCATGTGGGATGAAGAGAAGGTGAACAGGGAGCTCCAAAAGTACATGAAGAACGCTTTTCAGAACATCAAGGACATGTGCAAATCCCAAAACTGCAACCTTAGGATGGGGGCATTCACTTTGGGGGTTAACCGGGTTGCAAAGGCTACTCTGTTGAGGGGATGGGAGGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008724

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA008724&oldid=62276"