BGIOSGA008744

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Revision as of 03:20, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008744| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008744, complete gene.| tag = P0519E0...")
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Gene Name

BGIOSGA008744

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008744, complete gene.

LocusTag

P0519E06.25

Ensembl Transcript ID

BGIOSGA008744-TA

Ensembl Protein ID

BGIOSGA008744-PA

Length

3480

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28314356..28317835

Sequence Coding Region

28314356..28314444,28314542..28314905,28316175..28317425,28317746..28317835

Genome Context

<gbrowseImage1> name=IndicaChromosome02:28314356..28317835 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:28314356..28317835 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCCTCCAAGGAAACCTACCGCGTCGAGCTCCGAGCCGCCGCCCGCCAGCTCGGCGAGCGCGGCCTCTACTCCGCCGCCAAATGGGCGGCCGAGCTGCTCGTCGGAATCGAGCCCGACGCGACGCCGGCCCCGTCGTTGGTGATGGACACCCCTTCCTCGTCGGGCTCCGCCGCATCCGGGGGCCGCCTCCTGCACCTCCACCGCAGCGGCGGGTCCAGCTTCCGCCGCCGCCTCCGCCCGGGCGCGGCCGAGGCCGGGACGCCGCTCGGCGGCGTCTCGTACGTCAGCACGCCCATCCCCGATGACGACGCGTTCGACGTGGGGGGTGATAGGTACCTGCTCGCCAAGACCTACTTCGACTGCCGCGAGTACCGCCGCGCCGCGCACGTCCTGCGCGGCCAGACCGGCCGCAAGGCCGTGTTCCTTCGGTGCTATGCCCTGTACACGGCTGGAGAGAAACGGAAAGAGGAAGAAACAGTCGAGCTTGAGGGATCTCTGGGCAAAAGCAATGCTGTTAATCAGGAACTAGTTGCATTGGAGAGAGAGCTCGCAACACATCGGAGAACTGGTGCTATTGATTCATTTTGTTTGTACTTGTATGGCATTGTTCTACGTGATAAAGGCAGTGAAGCTCTAGCTAGAACAGTTCTGGTGGAATCTGTCAACAGCTACCCTTGGAACTGGAGTGCTTGGTTAGAGTTACAATCTCTCTGCACTAGCAGTGACATTTTGAACAACTTAAATATCAAGAATCACTGGATGAAAGATTTCTTCCTTGCTAGTGCACATCTCGAATTAAAAATGCATGAAGAAGCTTTGAAAAGATATGAGCGCTTAATGGGGGTTTTCCGTTGCAGTGACTACATTCAGGCTCAAATAGCTACCGTGCAGTATAGTATGAGAGACCTGGATGAAGCTGACATGATTTTTGAAGAACTCCTTAGGACTGATCCTTTCCGTGTGGATTCTATGGACGTTTACTCAAATTTATTGTATGCAAAAGAAAGCTCGACTGCTTTGAGTTTCCTTGCTCACAGAGTATTTTTGACAGATAAATATCGCCCAGAATCTTGCTGCATAATTGCAAATTACTACAGTTTGAAGGGGCAGCATGAAAAATCAGTTCTGTACTTTCAAAGAGCGCTGAAGCTTAATCGAAAGTATCTTTCAGCTTGGACTCTTATGGGACATGAGTTTGTTGAGCTAAAAAATACACCTGCTGCGATTGATGCCTACAGGAGAGCTGTTGATATAAATCCCAGAGATTACCGTGCTTGGTATGGTCTTGGTCAGATCTATGAGATGATGGGAATGCCGTTTTATGCAGTTTATTACTTCCGTAAGTCATCATACCTACAACCTAATGATGCCCGGCTTTGGAATGCTATGGCTCAGTGCTATGAAAGTGATCAACTCCAGATGATTGAAGAAGCCATCAAGTGCTATGAGAGATCTGCAAATAATAATGACACCGAAGGAATAGCACTTCATCAGCTAGCAAAGTTACATGGTATGCTTGGACAATCAGAGGAGGCAGCATTTTACTACAAGAAGGATCTAGAGAGAATGGAAGTTGAGGAAAGGCAGGGCCAGAATTTTGTTGAAGCTCTGCTTTTCCTTGCTAAGCATTGCAAGAGCATAGGCAGGTTTGAGGAGGCAGAGCACTATTGCACAAGGCTTTTGGATTACACCGGTCCAGAAAGGGAGACTGCAAAAAGTATTTTGCAAGGGCTAAAAAGAGCACAATCGGTACTTCCGTTGATGGATATCGACCATTTTGCAATGTAA</cdnaseq>

Protein Sequence

<aaseq>MASSKETYRVELRAAARQLGERGLYSAAKWAAELLVGIEPDATPAPSLVMDTPSSSGSAASGGRLLHLHRSGGSSFRRRLRPGAAEAGTPLGGVSYVSTPIPDDDAFDVGGDRYLLAKTYFDCREYRRAAHVLRGQTGRKAVFLRCYALYTAGEKRKEEETVELEGSLGKSNAVNQELVALERELATHRRTGAIDSFCLYLYGIVLRDKGSEALARTVLVESVNSYPWNWSAWLELQSLCTSSDILNNLNIKNHWMKDFFLASAHLELKMHEEALKRYERLMGVFRCSDYIQAQIATVQYSMRDLDEADMIFEELLRTDPFRVDSMDVYSNLLYAKESSTALSFLAHRVFLTDKYRPESCCIIANYYSLKGQHEKSVLYFQRALKLNRKYLSAWTLMGHEFVELKNTPAAIDAYRRAVDINPRDYRAWYGLGQIYEMMGMPFYAVYYFRKSSYLQPNDARLWNAMAQCYESDQLQMIEEAIKCYERSANNNDTEGIALHQLAKLHGMLGQSEEAAFYYKKDLERMEVEERQGQNFVEALLFLAKHCKSIGRFEEAEHYCTRLLDYTGPERETAKSILQGLKRAQSVLPLMDIDHFAM</aaseq>

Gene Sequence

<dnaseqindica>1..89#187..550#1820..3070#3391..3480#ATGGCTTCCTCCAAGGAAACCTACCGCGTCGAGCTCCGAGCCGCCGCCCGCCAGCTCGGCGAGCGCGGCCTCTACTCCGCCGCCAAATGGTACGTACGCCCCCCCGCCCCTAAAACCCACCAGGGCCCCCCTCCTCTAAACCCTAACCCTAACCCTAACCGCCGCCGCCTCTTCCTTCCTTTGTAGGGCGGCCGAGCTGCTCGTCGGAATCGAGCCCGACGCGACGCCGGCCCCGTCGTTGGTGATGGACACCCCTTCCTCGTCGGGCTCCGCCGCATCCGGGGGCCGCCTCCTGCACCTCCACCGCAGCGGCGGGTCCAGCTTCCGCCGCCGCCTCCGCCCGGGCGCGGCCGAGGCCGGGACGCCGCTCGGCGGCGTCTCGTACGTCAGCACGCCCATCCCCGATGACGACGCGTTCGACGTGGGGGGTGATAGGTACCTGCTCGCCAAGACCTACTTCGACTGCCGCGAGTACCGCCGCGCCGCGCACGTCCTGCGCGGCCAGACCGGCCGCAAGGCCGTGTTCCTTCGGTGCTATGCCCTGTACACGGTGAGTTCGGATCCTATTGTTTTTTTTAATTATTATTTTGGTGTGCGCGGGCGTGTTCCAGTTTGCAGATGTTTGGTATAGCGAGTGGTGTTTGTCTGCTTGAGGAAATGTCTCTCTGGAGCTGCTGCAAATATTTACGGCTGCAATTCTCTTATAGAGTTATTCATATTTTTCAACCTGTAGAAACATCTGGTTAGTTATCTTGACGTGTCAATGGAGTAACAGTAGTGGGATCTTACTGAAGGAAACAACAGGAATACATTAAAATTGTTGTAAAAACGTAAAAATATTTTTATTTGGTATGTTCTCCTTTGTTCATGGTTTGGGCGCTAAATCTTTGAAGCCCTAGGAGCGCCGATACTAGGATTTACTTGTCTTAATTGCCCCCCCCATGTCATGGTATAATGATGTACTGATTTATGTCAGTTTAAACCTTAGTAATTTGGTAAATGTCTGAACATATTGAAAAATGCTGAACCCTTTATTTTACATAACTGTTGCTTATTTGCTTTGTTCCTGGTTGTTTGGTGTCCTTAATTATGCATTACAGGGATGCTTGATTATTTTTATTGTAAGCAGGGGATGCTGGTTTGCTGCAATGTTAACATTAGACGAATTTATTGCATGCAGGAATGCATTTTACTAATACAGTGGTTCTGTTGTAATGAAGTTTGGAAACATTATATTCTAATATTGAGATGTATGGGCAGTATAAGATGTTAACTTATAGTAGTAACATGATTGCCTGATGCAACAAGGAGGGCTGAGGATCCAGGTCCATAAATGATTTATCTTTTCCTCTTTGCTATTTAATTTGTGATCTGCTAAAATAGGAGTATAGGACACGCCATAGTAATACAGTATATAACTGTACGCTTGAGGCTATGTTGCTTTTGATTGCTAGTGTGCCACTAGTGAATAGTGACTAATATTAAAGTATTCAATTTAGAACCGTGCTGATTTCCATTTTAGCAGGTCTTTCTATTACCTGGATTTTTATTTAAGTTGGCAAGCTGCACTGTCAATATATACAGTTATTGTCAATCTTTGCATCAATGTATGTCTATATACACTAACTTATTAGATCGTACAAATGTGGCTAGCAGTCTTCTTATCCATGGAAGGATTCTATTAAATGATTTATCTTTTCCTCTACAGGTTATCTAATCTTCTAAATACTAGAAACTGTCTCCCATTTGCTTCGTAGTTTAATTAGCATTTTGAAATTTGACATGCTTGGTGATCATAGTTATTTTCTCTACAATTTAGGCTGGAGAGAAACGGAAAGAGGAAGAAACAGTCGAGCTTGAGGGATCTCTGGGCAAAAGCAATGCTGTTAATCAGGAACTAGTTGCATTGGAGAGAGAGCTCGCAACACATCGGAGAACTGGTGCTATTGATTCATTTTGTTTGTACTTGTATGGCATTGTTCTACGTGATAAAGGCAGTGAAGCTCTAGCTAGAACAGTTCTGGTGGAATCTGTCAACAGCTACCCTTGGAACTGGAGTGCTTGGTTAGAGTTACAATCTCTCTGCACTAGCAGTGACATTTTGAACAACTTAAATATCAAGAATCACTGGATGAAAGATTTCTTCCTTGCTAGTGCACATCTCGAATTAAAAATGCATGAAGAAGCTTTGAAAAGATATGAGCGCTTAATGGGGGTTTTCCGTTGCAGTGACTACATTCAGGCTCAAATAGCTACCGTGCAGTATAGTATGAGAGACCTGGATGAAGCTGACATGATTTTTGAAGAACTCCTTAGGACTGATCCTTTCCGTGTGGATTCTATGGACGTTTACTCAAATTTATTGTATGCAAAAGAAAGCTCGACTGCTTTGAGTTTCCTTGCTCACAGAGTATTTTTGACAGATAAATATCGCCCAGAATCTTGCTGCATAATTGCAAATTACTACAGTTTGAAGGGGCAGCATGAAAAATCAGTTCTGTACTTTCAAAGAGCGCTGAAGCTTAATCGAAAGTATCTTTCAGCTTGGACTCTTATGGGACATGAGTTTGTTGAGCTAAAAAATACACCTGCTGCGATTGATGCCTACAGGAGAGCTGTTGATATAAATCCCAGAGATTACCGTGCTTGGTATGGTCTTGGTCAGATCTATGAGATGATGGGAATGCCGTTTTATGCAGTTTATTACTTCCGTAAGTCATCATACCTACAACCTAATGATGCCCGGCTTTGGAATGCTATGGCTCAGTGCTATGAAAGTGATCAACTCCAGATGATTGAAGAAGCCATCAAGTGCTATGAGAGATCTGCAAATAATAATGACACCGAAGGAATAGCACTTCATCAGCTAGCAAAGTTACATGGTATGCTTGGACAATCAGAGGAGGCAGCATTTTACTACAAGAAGGATCTAGAGAGAATGGAAGTTGAGGAAAGGCAGGGCCAGAATTTTGTTGAAGCTCTGCTTTTCCTTGCTAAGCATTGCAAGAGCATAGGCAGGTTTGAGGAGGCAGAGCACTATTGCACAAGGCTTTTGGATTACACCGGTCCAGTAAGTTCAATTTTACACAAAATTCCTTTTACTTACTGATGAAAATAACAAAAGATGGAATGGAGCAAATAGACTTCTTCTTATTTATTGGCTTTGTTAATGAACACTTATGTTTGCGTACTAATGTAGTTCAAATAGACTTCAACTCATCCAGTAAGCATTCACTTTGATTTGTTCTTTTAGGGTGCCTGATTTCTTTACTCTGGGTCTAAGTGGGAACTGGAAAATCATGTTTTTCATTCATAAATAATCAATCTTTGTTTGATCTCTTCTTTCTGATGATTCTGATTCACTACCACCTGTATGTTCTATATTTACAGGAAAGGGAGACTGCAAAAAGTATTTTGCAAGGGCTAAAAAGAGCACAATCGGTACTTCCGTTGATGGATATCGACCATTTTGCAATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008744