BGIOSGA008771

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Revision as of 03:20, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008771| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008771, complete gene.| tag = P0461B0...")
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Gene Name

BGIOSGA008771

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008771, complete gene.

LocusTag

P0461B08.19

Ensembl Transcript ID

BGIOSGA008771-TA

Ensembl Protein ID

BGIOSGA008771-PA

Length

4917

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28772432..28777348

Sequence Coding Region

28772432..28772729,28773464..28773585,28773740..28773861,28774239..28774343,28774466..28774895
,28774994..28775155,28775215..28775910,28775999..28776778,28777127..28777348

Genome Context

<gbrowseImage1> name=IndicaChromosome02:28772432..28777348 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:28772432..28777348 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGCGTCGGCCTCGGCGTGCACAGGCGGTGGGACACGTCGGGGAGCGGGTCGCAGTACAGCTTCAGGACGTCGGTAAGCAGCGTCGCGGAGATATCCACCGAGGTGGGGGTGGAAGTGAGCCCGCCGCCGCCGGCGGCGGCGGCGGCGGCGGCGGACAAGGTGTTTGTCGCAGTCGCCGCGGACGTGAAGTACGGCAAGAGCGCCTTGCAGTGGGCGCTGCAGAACCTGGCCAAGGATGGCGCCAAGGTCGTGATTGCTCATGTCCACTGCCCCGCGCAGATGATCCCCATGATGGGGGCAAAAGTTCATTATACCAAGATGAATACAAAACAGGTGAACGACTATAGGAACAAGGAGAGAGAAAAGGCAGAGGAGAAACTAGATGAATATCTTCTGATATGCAGAAAACTGAAGGTCAGCTGTGAGAAACTAATAATTGAGGAGGACGACATTGCTAAAGGCCTTACAGATCTTGTTGCCCTTCATGGCGTCACCAAGCTTGTCATGGGAGCAGCAGCAGACAAACACTACTCAAGGAAAATGAACACACCTAAGTCCAAGACAGCACTCAAGATATTGGAAGCAGCAGATCCTTCATGTAAGATATGGTTTACCTGTAAAGGACATCTGATATGTACAAGGGAAGCAAATACAACCGTTCCTGCAATACCACCATCACCTGCACACACAGTTGCATCAACATTGTCATCAAGCAGCATTTCCAGCCGTATGAGATCAATGTCATTGCACCCGTCAGAGAGTGAAGCATCAAGCTCAAGCGGAAGTCCAAGGCACAATCTGAACAGATCAAGAACAGAAGTGGCAAAGTATCCCTCACAAGGATCTGGCACTGCACCATCTCAGTTATTTGGACATTCAGATCAAGATGTCAATGACCAGCCAACAAGAACAGCAATGGGTTCTATAGATTCCTGGGATGAATTTGAGAGATCGCAAAACTCCTGCTACGATTCATCAAGAAATAGTGATACAGTTAGGGTCTCTGGATCAGCAATGCAGCAGCCCATGTATGAACCTGATGATGACCATTTTGTATCTCCTCGTAAACTGGAGAATTCAGGCGATGATGCAGACATATATGGTAGACTCCAAGAGGCTCTTAGTGAAACTCAAGACCTGAAGAGAGAGACATACGAAGAATCAACGAAACGTCGGAACGCCGAAAGAAATCTGATTTCAGCTCTTCAAAAGGCAAGTCATTTTGCTTCAAAAGTCAAAGAGTTGGAGAACCTGTATCAGAAGGAAGTCATGCATCGGAAAATAACCGAAGAGGCACTGGAGAAACAGATACAGGAGACAGAAGAAACGGAAAGGCACTGCAATGCATTATATGACAAGCTGCATGATGTGGAAGAGCAGAAGCTCATGGTGGAGCAGCACATAACTGAAATGGAGGCAGTTTTAAAAGAACGCGAAGATAGGCTGCATGATGTAGAAGAGCAGAAATTCACGGTGGAGCAGCGCATAACTGAAATGCAGGCAGTTTTAAAAGAACACAAAGATAAGCTGCATGATGTAGAAGAGCAGAAACTCATGGTGGAGCACCGTATAACTGAAATTCGGTCAGTTTTAAAAGAACGCGAAGAGAAGCTCGCAGAGAGCAAGTATCTACTCCAAGTGCTCCAAGCAGATAAAGAGAAGCTACAACAAGAGCGAGATGCCGCAGTAAGTGAATCTCAAGACTTGCGCCTGAAGAACAAACAGAGAATTTCCATGCCGGGTGAAGATCTAAACACCGAGTTCTCCTCTTATGAGCTTGAACAAGCGACCAGAGGCTTCGATCAAGAACTCAAGATCGGCGAGGGCGGTTTTGGGAGCGTCTACAAAGGCACACTCCGCAACACAACTGTGGCTATCAAGCTGCTGCACCCACATAGCATGCAAGGTCAATCAGAATTCGACCAGGAGATTGCTGTTCTCAGTAGAGTACGACATCCAAACCTCGTCACTTTGATCGGCTCTTGCAGGGAGGCATTTGGCTTGGTGTACGAATTCCTCCCCAAAGGCAGCCTCGAGGACCGCCTGGCCTGCCTGAACAACACGCCGCCATTGACATGGCAGGTGCGCACCAGGATCATCTACGAGATGTGCTCGGCGCTGAGCTTCCTCCACTCGAACAAGCCGCACCCGATTGTCCACGGCGACCTGAAGCCGGCGAACATCCTCCTCGACGCCAACTTCGTCAGCAAGCTGGGCGACTTCGGCATCTGCCGGCTCCTGATACAGACGAACACCGGCGCCGCCGCCGCCGCCACCACCCGGTTGTACCGGACGACCACACCGAAGGGGACCTTCGCGTACATGGACCCGGAGTTCCTCACCACCGGCGAGCTGACGCCGCGCTCCGACGTGTACTCCCTCGGAATCATCATCCTGCGGCTGCTGACCGGGAAGCCTCCCCAGAAGATCGCCGAGGTTGTGGAGGACGCCATCGAGAGCGGCGGGCTGCACTCCATCCTCGATCCCTCCGCGGGGAGCTGGCCGTTCGTGCAGGCCAACCAACTCGCGCACCTCGGCCTGCGGTGCGCCGAGATGAGCCGGAGGCGCCGGCCGGATCTCGCGACCGACGTGTGGAAGGTCGTCGAGCCCCTCATGAAGGCCGCGTCGCTGACCGCCGGGAGGCCGTCGTTCGTGGCCCGGCCGGACGACTCCCCGCCGCCGTCCTACTTCGTCTGCCCGATCTTCCAGGAGGAGATGAACGATCCCCACATCGCGGCGGACGGGTTCACGTACGAAGCCGAGGCCATCAAGGGGTGGCTCGACAGCGGGCACGACACGTCGCCGATGACGAACCTGACGCTCGAGCACCGCGAGCTCATCCCGAACAGGGCGCTCCGCTCGGCCATCCTCGAGTGGCAGCAACAGCGTCAACGGCATCAGCAGCAAGAGGAGGACGACGACTGTACATGA</cdnaseq>

Protein Sequence

<aaseq>MDGVGLGVHRRWDTSGSGSQYSFRTSVSSVAEISTEVGVEVSPPPPAAAAAAADKVFVAVAADVKYGKSALQWALQNLAKDGAKVVIAHVHCPAQMIPMMGAKVHYTKMNTKQVNDYRNKEREKAEEKLDEYLLICRKLKVSCEKLIIEEDDIAKGLTDLVALHGVTKLVMGAAADKHYSRKMNTPKSKTALKILEAADPSCKIWFTCKGHLICTREANTTVPAIPPSPAHTVASTLSSSSISSRMRSMSLHPSESEASSSSGSPRHNLNRSRTEVAKYPSQGSGTAPSQLFGHSDQDVNDQPTRTAMGSIDSWDEFERSQNSCYDSSRNSDTVRVSGSAMQQPMYEPDDDHFVSPRKLENSGDDADIYGRLQEALSETQDLKRETYEESTKRRNAERNLISALQKASHFASKVKELENLYQKEVMHRKITEEALEKQIQETEETERHCNALYDKLHDVEEQKLMVEQHITEMEAVLKEREDRLHDVEEQKFTVEQRITEMQAVLKEHKDKLHDVEEQKLMVEHRITEIRSVLKEREEKLAESKYLLQVLQADKEKLQQERDAAVSESQDLRLKNKQRISMPGEDLNTEFSSYELEQATRGFDQELKIGEGGFGSVYKGTLRNTTVAIKLLHPHSMQGQSEFDQEIAVLSRVRHPNLVTLIGSCREAFGLVYEFLPKGSLEDRLACLNNTPPLTWQVRTRIIYEMCSALSFLHSNKPHPIVHGDLKPANILLDANFVSKLGDFGICRLLIQTNTGAAAAATTRLYRTTTPKGTFAYMDPEFLTTGELTPRSDVYSLGIIILRLLTGKPPQKIAEVVEDAIESGGLHSILDPSAGSWPFVQANQLAHLGLRCAEMSRRRRPDLATDVWKVVEPLMKAASLTAGRPSFVARPDDSPPPSYFVCPIFQEEMNDPHIAADGFTYEAEAIKGWLDSGHDTSPMTNLTLEHRELIPNRALRSAILEWQQQRQRHQQQEEDDDCT</aaseq>

Gene Sequence

<dnaseqindica>1..298#1033..1154#1309..1430#1808..1912#2035..2464#2563..2724#2784..3479#3568..4347#4696..4917#ATGGACGGCGTCGGCCTCGGCGTGCACAGGCGGTGGGACACGTCGGGGAGCGGGTCGCAGTACAGCTTCAGGACGTCGGTAAGCAGCGTCGCGGAGATATCCACCGAGGTGGGGGTGGAAGTGAGCCCGCCGCCGCCGGCGGCGGCGGCGGCGGCGGCGGACAAGGTGTTTGTCGCAGTCGCCGCGGACGTGAAGTACGGCAAGAGCGCCTTGCAGTGGGCGCTGCAGAACCTGGCCAAGGATGGCGCCAAGGTCGTGATTGCTCATGTCCACTGCCCCGCGCAGATGATCCCCATGAGTAAGCCTCCAGTCCTCAATCATTTGTTTGATGATCTGCGTCACAGGAGAGAGATTTAAGATTGGATACCTTTTAATTTCGGTAATTTAGCGACGAGTTTGGTTATTTGGATCCCGCTTCCGTTTTGAATCTATGGTTAGCAGTTTAATAATGGATATGATTCGTTGACATTGGCGACTTGAAAGCCGAATGCCAGTGCAAACTATGCATACTCCCTTTCTGGCTTTCTTACAGTACAATAGACATTTGCACGCCCAAACGTTGCTTGACGAAGTTTCTCATGAGTTGTATGATTGTATCTGCCGGCAATGCTGACTTCGTGCAGATATTCTAGAAAATACATACAATTATTTGTTCATGTAGCATTATTGGTCCTGTAACTACTTCCAAAATCCTATTTTGCCGTCGCTTCGTGGAAAAAAGTAACCTAGGGTGTATTGTTAAAATGCAAGAATTTCTATACTAATTTCAATATACCTCTACGTGGGACTATTACCAAATCCCAACAACACTACTACACATGCATCAAAGGTCATCCTCTTATTGCCCAGGGTAACAAGTTCAGAAGCAATACGTTAATATTTGCAAACGATGCAACTGGTTCACTTCTGATTTCTGACTTCTAGTGCGATCAGAAATCCTCCATGATTTGTTTGTCACCAGTGCGATCAGAAATCCTCCATGATTTGTTTGTCACCTTTTAAATAGCTTGTCCTTGATTCCTATTGTTTCAGTGGGGGCAAAAGTTCATTATACCAAGATGAATACAAAACAGGTGAACGACTATAGGAACAAGGAGAGAGAAAAGGCAGAGGAGAAACTAGATGAATATCTTCTGATATGCAGAAAACTGAAGGTGTTCTTCTCAACCACTCTTATGTCTTTCCTAATGAGCAATCAACAAAGTAATAAATTACCTAATACCCAATTATGCATTCTACTAATATTACTCAAGAAGATATATCAATATATATCTCAGGAATAATTTGATCAATATTTCGTTTTCTCAGGTCAGCTGTGAGAAACTAATAATTGAGGAGGACGACATTGCTAAAGGCCTTACAGATCTTGTTGCCCTTCATGGCGTCACCAAGCTTGTCATGGGAGCAGCAGCAGACAAACACTACTCAAGGTGACCACAACCTCATAAGTTTTTTTTTTCTGATGACTAGCACACACATTGCACATTTAAAACTGTTTCACAAAATATTGTTTCTTCCCTGATAAGTACTACCTCCGTTTCAGGTTATAAGACTTTCTAGTATTGTCTACATTCATATAGATGTTAGTGAATCTAGGCACACATATATGTCTAGATTCATTAACATATATATATGAATGTATACAATGCTAGAAAGTCTTATAATATGAAACGGAGGAAGTAGCATTCAGTGTTTGCCGCTAGCAAGAAATGAGAAACAGAAAGTCCCCTCAAAAAAAGAAATGAGAAACAGAATGGTCTGTAAAGTCTTTAACAGTTTCGAACCTGGATGTTTTCCCAATATGCAGGAAAATGAACACACCTAAGTCCAAGACAGCACTCAAGATATTGGAAGCAGCAGATCCTTCATGTAAGATATGGTTTACCTGTAAAGGACATCTGATATGTACAAGGTAAGGTTAAGCCAAGCGGGTCAAAGCAGTCTTACGATAGATGGTTTTCAGTGATACTAACATCAGAAAAGCACATTGAACAACACGTGAAAAATAGCTAAGCTTACCCGTCAACATTGCAGGGAAGCAAATACAACCGTTCCTGCAATACCACCATCACCTGCACACACAGTTGCATCAACATTGTCATCAAGCAGCATTTCCAGCCGTATGAGATCAATGTCATTGCACCCGTCAGAGAGTGAAGCATCAAGCTCAAGCGGAAGTCCAAGGCACAATCTGAACAGATCAAGAACAGAAGTGGCAAAGTATCCCTCACAAGGATCTGGCACTGCACCATCTCAGTTATTTGGACATTCAGATCAAGATGTCAATGACCAGCCAACAAGAACAGCAATGGGTTCTATAGATTCCTGGGATGAATTTGAGAGATCGCAAAACTCCTGCTACGATTCATCAAGAAATAGTGATACAGTTAGGGTCTCTGGATCAGCAATGCAGCAGCCCATGTATGAACCTGATGATGACCATTTTGTATCTCCTCGTAAACTGGTACATATCGCCTGATGTACTGTGCAAGTTGAAAAACATAAGAGTAGGACTCTTCTCAATGAAATGTAACACATAACTGAACTTTTTGTGCAACACAGGAGAATTCAGGCGATGATGCAGACATATATGGTAGACTCCAAGAGGCTCTTAGTGAAACTCAAGACCTGAAGAGAGAGACATACGAAGAATCAACGAAACGTCGGAACGCCGAAAGAAATCTGATTTCAGCTCTTCAAAAGGCAAGTCATTTTGCTTCAAAAGTCCATAATTCATACTGTAATCGATGTGAACAAATAAAAAGATAGAACTTATCTTACAGGTCAAAGAGTTGGAGAACCTGTATCAGAAGGAAGTCATGCATCGGAAAATAACCGAAGAGGCACTGGAGAAACAGATACAGGAGACAGAAGAAACGGAAAGGCACTGCAATGCATTATATGACAAGCTGCATGATGTGGAAGAGCAGAAGCTCATGGTGGAGCAGCACATAACTGAAATGGAGGCAGTTTTAAAAGAACGCGAAGATAGGCTGCATGATGTAGAAGAGCAGAAATTCACGGTGGAGCAGCGCATAACTGAAATGCAGGCAGTTTTAAAAGAACACAAAGATAAGCTGCATGATGTAGAAGAGCAGAAACTCATGGTGGAGCACCGTATAACTGAAATTCGGTCAGTTTTAAAAGAACGCGAAGAGAAGCTCGCAGAGAGCAAGTATCTACTCCAAGTGCTCCAAGCAGATAAAGAGAAGCTACAACAAGAGCGAGATGCCGCAGTAAGTGAATCTCAAGACTTGCGCCTGAAGAACAAACAGAGAATTTCCATGCCGGGTGAAGATCTAAACACCGAGTTCTCCTCTTATGAGCTTGAACAAGCGACCAGAGGCTTCGATCAAGAACTCAAGATCGGCGAGGGCGGTTTTGGGAGCGTCTACAAAGGCACACTCCGCAACACAACTGTGGCTATCAAGCTGCTGCACCCACATAGCATGCAAGGTCAATCAGAATTCGACCAGGAGGTAATCCAGTTCATCAGATCACTCACATAACTCCATCAAATCAAGTTGGCAACCATGGCTAACCAAGCAATTGACACCATTATTGCAGATTGCTGTTCTCAGTAGAGTACGACATCCAAACCTCGTCACTTTGATCGGCTCTTGCAGGGAGGCATTTGGCTTGGTGTACGAATTCCTCCCCAAAGGCAGCCTCGAGGACCGCCTGGCCTGCCTGAACAACACGCCGCCATTGACATGGCAGGTGCGCACCAGGATCATCTACGAGATGTGCTCGGCGCTGAGCTTCCTCCACTCGAACAAGCCGCACCCGATTGTCCACGGCGACCTGAAGCCGGCGAACATCCTCCTCGACGCCAACTTCGTCAGCAAGCTGGGCGACTTCGGCATCTGCCGGCTCCTGATACAGACGAACACCGGCGCCGCCGCCGCCGCCACCACCCGGTTGTACCGGACGACCACACCGAAGGGGACCTTCGCGTACATGGACCCGGAGTTCCTCACCACCGGCGAGCTGACGCCGCGCTCCGACGTGTACTCCCTCGGAATCATCATCCTGCGGCTGCTGACCGGGAAGCCTCCCCAGAAGATCGCCGAGGTTGTGGAGGACGCCATCGAGAGCGGCGGGCTGCACTCCATCCTCGATCCCTCCGCGGGGAGCTGGCCGTTCGTGCAGGCCAACCAACTCGCGCACCTCGGCCTGCGGTGCGCCGAGATGAGCCGGAGGCGCCGGCCGGATCTCGCGACCGACGTGTGGAAGGTCGTCGAGCCCCTCATGAAGGCCGCGTCGCTGACCGCCGGGAGGCCGTCGTTCGTGGCCCGGCCGGACGACTCCCCGCCGCCGTCCTACTTCGTCTGCCCGATCTTCCAGGTAGCAAAAAATCCGTGATTAAATTATTCCTGAAAAAAATCGAGGCAAAATTTCCTCGTGATTGGATGATGGCTTCCATCAGATGCTCTAATCAGCCGAAGAAAGAGTCAAAATTTTCAAACTTAATTTTAAAATTAATTTTAAGATATTTTAAACGTAATTTTTTATTGACTTTTAAATCATCAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAGTTTACCCAAAAAATTATTTTTATTTCCTAAAAAGCCAAAGGAATATGAGTAAACTATGGGGGATGATTCAAACTCGTGTTGGGATGGATGTGAAAGCAGGAGGAGATGAACGATCCCCACATCGCGGCGGACGGGTTCACGTACGAAGCCGAGGCCATCAAGGGGTGGCTCGACAGCGGGCACGACACGTCGCCGATGACGAACCTGACGCTCGAGCACCGCGAGCTCATCCCGAACAGGGCGCTCCGCTCGGCCATCCTCGAGTGGCAGCAACAGCGTCAACGGCATCAGCAGCAAGAGGAGGACGACGACTGTACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008771