BGIOSGA008778

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Revision as of 03:20, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008778| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008778, complete gene.| tag = OJ1725_...")
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Gene Name

BGIOSGA008778

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008778, complete gene.

LocusTag

OJ1725_H08.12-1

Ensembl Transcript ID

BGIOSGA008778-TA

Ensembl Protein ID

BGIOSGA008778-PA

Length

3993

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28879263..28883255

Sequence Coding Region

28879263..28881277,28881600..28881723,28882067..28882360,28882442..28882644,28882973..28883255

Genome Context

<gbrowseImage1> name=IndicaChromosome02:28879263..28883255 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:28879263..28883255 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCAGGTGCGGCGGAAGAGTAGCCTGAGGTCGCATGGCTCAGGCAAGTCCTCGCCGCGGGTGGGATCGGGGGTGTTCGATGAGCGGTCCGGACTGGCGGCCGATCGTGACGGCGGCGAGGAAGGGGAGGTGGTCGTGAGGATCGACGGGGAGGGGCCTTGCCGCGAGCCGTTCGCGTTCCCCGGCCAGGATGGCGGTGGGGCGGGGAATGTGAGCCCGAACACCGACTCCACGGCGAGCACGCCGCGGGGGGCGAGCAGGACGTGGTCCAGCGGGACCAACTCGCCGCGATCCCCGCCCAAGGTGAGGCGGGACGGGAGCGTTGAGTTTTGGAAGAATGATGGCGGCGGGGACGGGGGCAGCGATGGGGGTGGAGGCGGAGGCGGTGGCGGTGGCGGTGGCCGGCGCGCCTGCGAGGCGTTCAGCTTCAAGAACCGGGCGCCGCCGCGGCCTTCGTCGTCGCAGGCGTCGTCCCCTTCGCTATCGCCGCAGCCGGCACACGCTGCGGGTGCGGTAGACGGCGGCGAGGATCCGCCCACGCGTCTCATCGGGAACTTCCTTCGGAAACAGAAGGCGTCCGGCGCCGAGCTGTCGCTGGACCTCGACATGGAGGAGCTCGGGAGGCCGTCGCAACTGCATGCGCAGCCATCCTTCTCAAACTCCCTGGAACGCGAGGCGCGAGTCTCCTTCCAACCGAAAAGGCGTGTCGCCTCGTCCTCTGACTCCGACTCCGACACCGGAGGTAGCCGTAGGCGCGGCGGCGACGACGGCGAGGTTGTTCGCTGCACGTCCAGTTCCACTGCAGCGGGACACTTGATGCGAGCCAAAACGCGATCCCGGCTGATGGACCCGCCGCCGCAGCCCCAGCCGGCGTCCGCGGTCCCTCCCGTCGGCGACGAGGAGAGGAGATCCTCTGTCTTGCGGACGCCTACGAAGTCCGGCCAGTTCATCTCGGGCCTCATGACCGGCAAGTCCGGGCAAATCGCCAAGTCGGGCCCGTTGGAAGAGGAGGAGGAGGACCCATTCATGGACGAGGACATCCCCGACGAATTCAAGCGCGGGAAGCTGGACGCCCTCACTATCCTTCAGTGGCTCAGCTTGGTGCTCATCATCGCGGCATTGGCGTGCAGTCTCACCATCAAGGCCCTGTCCGGGAAGAAGGTCTGGGGGCTGCACCTCTGGAAGTGGGAGCTCCTCGTGTTCGTGCTCATCTGCGGCCGCCTTGTCTCCGGCTGGGTCATCCGGATCGCCGTGTTCTGCGTCGAGCGCAACTTCTTGCTGCGCAAGCGCGTGCTCTACTTCGTGTACGGCGTGCGCAGCGCCGTGCAGAACGCGCTCTGGCTCGGCCTGGTGCTCTCCTCTTGGCACTTCATGTTCGACAAGAACGTCCAGCGGGAGACGAACTCGCCTGTGCTGCCCTACGTGCAGAAGATACTGTTCTGCTTCCTCGTCGCCACGCTCATCCGCCTCGTCAAGACGCTGCTGCTCAAGGTGCTGGCATCCTCCTTCCATGTCAACACATACTTTGACCGGATTCAGGAGGCATTGTTCAACCAGTTTGTCATCGAGACGCTCTCCGGGCCGCCCCTAGTTGACGAAAACCAATTCCTTGCTGAGATGCATGAGCTTCAACGCGCAGGAGCAACCATCCCAGCTGAGCTCCGTTCCACTGTACCAACCAAGAATCTTTCAGGGCAAAGGAGTATTCGGATGTCCGGGGTGATTCCTAAGGGAGAAGGGAGCAAGCAGCTGTCAAAAGAGAAAGGAGAGCACCAGATTGAGGAGGGGATCACCATTGACAAGCTTCATAAACTCAACCAGAAAAATATCTCAGCTTGGAACATGAAAAGGTTGATGAGGATTGTTCGGTTTGGGACGCTCACGACAATGGATGAGCAGATACAGCAGGCAACGGGTGAGGGGGATGAGTCAGCGACACAGATTCGTAGTGAATATGAAGCCAAGATTGCTGCCAAGAAGATCTTTCACAATGTGGCGAAGCCTGGCTCCAAGTATATATACTTGTCAGATTTGCTGCGTTTCATGAGGCAGGAAGAAGCCATCAAAACAATGGATCTTTTCGAAGGAGCACAGGAGCACAGCAGGGTTAGCAAGAGATCTCTAAAGAACTGGGTGGTGAATGCATTTAGAGAGCGCAAAGCCCTTGCCCTAACACTTAATGATACAAAGACTGCAGTGAACAAGCTCAACCAGATGGTTAATGTTGTTGTTGGGATAATTGTGTTTGCCCTCTGGCTACTTATTCTGGGTATAGCAACAACACATTTCTTTGTCTTCCTCAGTTCACAAGTTCTTGTGGCAGTTTTTGTATTTGGGAATACTTTGAAGACAATTTTTGAGGCAATTGTGTTCTTGTTCGTGATGCATCCTTATGATGTTGGTGATCGCTGTGAAATAGAAGATTGTCAGGTGGTTGTTGAGGAAATGAATATAATGACAACAGTGTTTCTCCGATATGATAACCTGAAGATCTATTATCCAAACAGTGTACTTGCCACAAAACCGATTATGAATTACTACAGGAGTCCTGATATGGGAGAAGGAATTGACTTCTCCGTTCATGTTGCCACCCCAGTGGAGAAATTAGCCCTTATGAAGGAAAGATTATTACGTTACATCGACAACAAGAAGGACCATTGGTATCCTGGTGCAATGGTTGTCCTCCGTGATGTGGATGACACCAACAAGCTGAAAGTGTCCATATGGCTCCGGCACACACTCAACTGGCAGGACATGGGGATGAGGTTCGTAAGGAGGGAGCTGGTGCTCCAAGAGATGATCAAAGTTCTCAAGGACCTCGACATAGAATACAGGATGCTGCCACTCGACGTGAACGTGCGAAACGCGCCCCCTATCCAGTCCACGAGGATGCCAACGACATGGAACTATTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MEQVRRKSSLRSHGSGKSSPRVGSGVFDERSGLAADRDGGEEGEVVVRIDGEGPCREPFAFPGQDGGGAGNVSPNTDSTASTPRGASRTWSSGTNSPRSPPKVRRDGSVEFWKNDGGGDGGSDGGGGGGGGGGGGRRACEAFSFKNRAPPRPSSSQASSPSLSPQPAHAAGAVDGGEDPPTRLIGNFLRKQKASGAELSLDLDMEELGRPSQLHAQPSFSNSLEREARVSFQPKRRVASSSDSDSDTGGSRRRGGDDGEVVRCTSSSTAAGHLMRAKTRSRLMDPPPQPQPASAVPPVGDEERRSSVLRTPTKSGQFISGLMTGKSGQIAKSGPLEEEEEDPFMDEDIPDEFKRGKLDALTILQWLSLVLIIAALACSLTIKALSGKKVWGLHLWKWELLVFVLICGRLVSGWVIRIAVFCVERNFLLRKRVLYFVYGVRSAVQNALWLGLVLSSWHFMFDKNVQRETNSPVLPYVQKILFCFLVATLIRLVKTLLLKVLASSFHVNTYFDRIQEALFNQFVIETLSGPPLVDENQFLAEMHELQRAGATIPAELRSTVPTKNLSGQRSIRMSGVIPKGEGSKQLSKEKGEHQIEEGITIDKLHKLNQKNISAWNMKRLMRIVRFGTLTTMDEQIQQATGEGDESATQIRSEYEAKIAAKKIFHNVAKPGSKYIYLSDLLRFMRQEEAIKTMDLFEGAQEHSRVSKRSLKNWVVNAFRERKALALTLNDTKTAVNKLNQMVNVVVGIIVFALWLLILGIATTHFFVFLSSQVLVAVFVFGNTLKTIFEAIVFLFVMHPYDVGDRCEIEDCQVVVEEMNIMTTVFLRYDNLKIYYPNSVLATKPIMNYYRSPDMGEGIDFSVHVATPVEKLALMKERLLRYIDNKKDHWYPGAMVVLRDVDDTNKLKVSIWLRHTLNWQDMGMRFVRRELVLQEMIKVLKDLDIEYRMLPLDVNVRNAPPIQSTRMPTTWNYS</aaseq>

Gene Sequence

<dnaseqindica>1..2015#2338..2461#2805..3098#3180..3382#3711..3993#ATGGAGCAGGTGCGGCGGAAGAGTAGCCTGAGGTCGCATGGCTCAGGCAAGTCCTCGCCGCGGGTGGGATCGGGGGTGTTCGATGAGCGGTCCGGACTGGCGGCCGATCGTGACGGCGGCGAGGAAGGGGAGGTGGTCGTGAGGATCGACGGGGAGGGGCCTTGCCGCGAGCCGTTCGCGTTCCCCGGCCAGGATGGCGGTGGGGCGGGGAATGTGAGCCCGAACACCGACTCCACGGCGAGCACGCCGCGGGGGGCGAGCAGGACGTGGTCCAGCGGGACCAACTCGCCGCGATCCCCGCCCAAGGTGAGGCGGGACGGGAGCGTTGAGTTTTGGAAGAATGATGGCGGCGGGGACGGGGGCAGCGATGGGGGTGGAGGCGGAGGCGGTGGCGGTGGCGGTGGCCGGCGCGCCTGCGAGGCGTTCAGCTTCAAGAACCGGGCGCCGCCGCGGCCTTCGTCGTCGCAGGCGTCGTCCCCTTCGCTATCGCCGCAGCCGGCACACGCTGCGGGTGCGGTAGACGGCGGCGAGGATCCGCCCACGCGTCTCATCGGGAACTTCCTTCGGAAACAGAAGGCGTCCGGCGCCGAGCTGTCGCTGGACCTCGACATGGAGGAGCTCGGGAGGCCGTCGCAACTGCATGCGCAGCCATCCTTCTCAAACTCCCTGGAACGCGAGGCGCGAGTCTCCTTCCAACCGAAAAGGCGTGTCGCCTCGTCCTCTGACTCCGACTCCGACACCGGAGGTAGCCGTAGGCGCGGCGGCGACGACGGCGAGGTTGTTCGCTGCACGTCCAGTTCCACTGCAGCGGGACACTTGATGCGAGCCAAAACGCGATCCCGGCTGATGGACCCGCCGCCGCAGCCCCAGCCGGCGTCCGCGGTCCCTCCCGTCGGCGACGAGGAGAGGAGATCCTCTGTCTTGCGGACGCCTACGAAGTCCGGCCAGTTCATCTCGGGCCTCATGACCGGCAAGTCCGGGCAAATCGCCAAGTCGGGCCCGTTGGAAGAGGAGGAGGAGGACCCATTCATGGACGAGGACATCCCCGACGAATTCAAGCGCGGGAAGCTGGACGCCCTCACTATCCTTCAGTGGCTCAGCTTGGTGCTCATCATCGCGGCATTGGCGTGCAGTCTCACCATCAAGGCCCTGTCCGGGAAGAAGGTCTGGGGGCTGCACCTCTGGAAGTGGGAGCTCCTCGTGTTCGTGCTCATCTGCGGCCGCCTTGTCTCCGGCTGGGTCATCCGGATCGCCGTGTTCTGCGTCGAGCGCAACTTCTTGCTGCGCAAGCGCGTGCTCTACTTCGTGTACGGCGTGCGCAGCGCCGTGCAGAACGCGCTCTGGCTCGGCCTGGTGCTCTCCTCTTGGCACTTCATGTTCGACAAGAACGTCCAGCGGGAGACGAACTCGCCTGTGCTGCCCTACGTGCAGAAGATACTGTTCTGCTTCCTCGTCGCCACGCTCATCCGCCTCGTCAAGACGCTGCTGCTCAAGGTGCTGGCATCCTCCTTCCATGTCAACACATACTTTGACCGGATTCAGGAGGCATTGTTCAACCAGTTTGTCATCGAGACGCTCTCCGGGCCGCCCCTAGTTGACGAAAACCAATTCCTTGCTGAGATGCATGAGCTTCAACGCGCAGGAGCAACCATCCCAGCTGAGCTCCGTTCCACTGTACCAACCAAGAATCTTTCAGGGCAAAGGAGTATTCGGATGTCCGGGGTGATTCCTAAGGGAGAAGGGAGCAAGCAGCTGTCAAAAGAGAAAGGAGAGCACCAGATTGAGGAGGGGATCACCATTGACAAGCTTCATAAACTCAACCAGAAAAATATCTCAGCTTGGAACATGAAAAGGTTGATGAGGATTGTTCGGTTTGGGACGCTCACGACAATGGATGAGCAGATACAGCAGGCAACGGGTGAGGGGGATGAGTCAGCGACACAGATTCGTAGTGAATATGAAGCCAAGATTGCTGCCAAGAAGATCTTTCACAATGTGGCGAAGCCTGGCTCCAAGTAAGTGTCTTCATTGTCAGTAGTATAGTATGGTTAGATTCCCTAATCTCCTGCAAGTGCCATCATTGCTAGTTCTTACAATATAGATAATCAGACAAGCAACTGCAATTTATCTGTAATGTAGGAACTGTTAGTTCGTGCGGTGGTCGTGCGGACAGTCAGTGTTATTTCATTGGAGATGCTAGTATGCTAATATTTCATCCTATATATCTTTAGTATTGAGTTACAGGTGTTTAAAGCTTATTGAAAACAGGGATTGCAAAAATTCTGAACTTGCACATTTCTGATCAAATTCCTAATCACAAACATATGAATACTGCAGGTATATATACTTGTCAGATTTGCTGCGTTTCATGAGGCAGGAAGAAGCCATCAAAACAATGGATCTTTTCGAAGGAGCACAGGAGCACAGCAGGGTTAGCAAGAGATCTCTAAAGAACTGGGTGGTAATGATCTTTCACGATATTGATTTATAATAACGAGTCACAGGGTGTGTTTGGTTCTTTGCCAATATCAACTATACCAAAATATTGGTGTTGCCAAAAAAAAAGGTGCTCATTTGGTTTGCAACTAAAATTTTGTTATCCCTTTGGCACCAAACGAAATACCAGTACCTACATATTTTGGCAACAATCCAAACATGCCCCTTACCAAAATTTTTTGGCAATGACCAAATCTTGCCATTGGCCCCAAAAAATGGGCAAGGCTAACAATGGCAGTAATCCAAACATTCCCGTAGCTAGTTCTGAAAATGCCCTTGCTAATATTGTTGTATGTATTCTTCTGTAGGTGAATGCATTTAGAGAGCGCAAAGCCCTTGCCCTAACACTTAATGATACAAAGACTGCAGTGAACAAGCTCAACCAGATGGTTAATGTTGTTGTTGGGATAATTGTGTTTGCCCTCTGGCTACTTATTCTGGGTATAGCAACAACACATTTCTTTGTCTTCCTCAGTTCACAAGTTCTTGTGGCAGTTTTTGTATTTGGGAATACTTTGAAGACAATTTTTGAGGCAATTGTGTTCTTGTTCGTGATGCATCCTTATGATGTTGGTGATCGCTGTGAAATAGAAGATTGTCAGGTAGTGGGAAAGTTCTTTAATCTTCATTCATGAATATTGCCTTGCATTCATTTACTAAAGATTGAACTACTTGAATTTCAGGTGGTTGTTGAGGAAATGAATATAATGACAACAGTGTTTCTCCGATATGATAACCTGAAGATCTATTATCCAAACAGTGTACTTGCCACAAAACCGATTATGAATTACTACAGGAGTCCTGATATGGGAGAAGGAATTGACTTCTCCGTTCATGTTGCCACCCCAGTGGAGAAATTAGCCCTTATGAAGGAAAGATTATTACGGTATGTATTAGTGTTCTTATCTTGTTGCAATACAATCCGACCTCATGAAATCTAATCAACAATGAATGATTAACTATGAATGTAAAAATGCAACTATGAGAATTTGATTCTGTTAATACTGTCTACTGGAGTCCGAAAGAAGTGCCTGCACTCTTGCCCCACCTAAGGCCTATGAATTAGCACTAAATTAGGGCATAAGAACATTTCATCATAGTTACAGCCTTCCTATCAGATTATAAAATCAGTCAGGCATCTATGAGCTCATTTGCTGCTTATGTTAGTATCTTACCACGCCGAGCTAATCAATATTTTCACTTCTAAATTTCAGTTACATCGACAACAAGAAGGACCATTGGTATCCTGGTGCAATGGTTGTCCTCCGTGATGTGGATGACACCAACAAGCTGAAAGTGTCCATATGGCTCCGGCACACACTCAACTGGCAGGACATGGGGATGAGGTTCGTAAGGAGGGAGCTGGTGCTCCAAGAGATGATCAAAGTTCTCAAGGACCTCGACATAGAATACAGGATGCTGCCACTCGACGTGAACGTGCGAAACGCGCCCCCTATCCAGTCCACGAGGATGCCAACGACATGGAACTATTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008778