BGIOSGA008779

From RiceWiki
Revision as of 03:20, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008779| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008779, complete gene.| tag = P0684A0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008779

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008779, complete gene.

LocusTag

P0684A08.2

Ensembl Transcript ID

BGIOSGA008779-TA

Ensembl Protein ID

BGIOSGA008779-PA

Length

1838

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28892813..28894650

Sequence Coding Region

28892813..28894218,28894311..28894650

Genome Context

<gbrowseImage1> name=IndicaChromosome02:28892813..28894650 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:28892813..28894650 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCCGCCTCGCCACCGGCCTCCCCGCCTCACCCCAAGCGCCCCAAGATGTCCTCCTCCTCCGACCCCGACCAGGAGCCCACCTCGCCTTCCGCCGCTGGCGCCGACGGCGCGCAGCCCCGCGCCCCCCGGTACAAGCGTCGCAAGGTGGCCATCCTGCTCGGCTACTGCGGCGCGGGGTACCAGGGCATGCAGAAGAACCCGGGCGCGCGCACCATCGAGGGGGACCTGGAGGAGGCGCTCTACCGGGCCGGCGCCGTGCCCGAGGCCGACCGCGCCGCGCCCCGCCGCTACGACTGGGCCCGCGCGGCGCGCACCGACAAGGGCGTCAGCGCCGCGGCGCAGGTCGTCTCCGGCCGCTTCTACGTCGACCCGCCCGTCTTCACTGATCGCCTGAATGCGCAGCTCGCGCCCCAGATCCGCGCCTTCGGCTACGTCCGCGTCACCAACTCGTTCAACGCGAAGAAGTTCTGCGACCGCCGGAGGTATGTGTACCTGCTGCCCGTGTTCGCGCTCGACCCCAGCGCGCACCCCGACCGTGAGGCCGTCATGGCGAGCGTTGGGAGTGGGAGCGAGCTTACGAAGTGCCTTGAGTGCTCAGAGAGGGGTAGGAAGGTGCCCGGTGTCATGGGCCGGGAGGGTAAGGTACCCGATCCTGCCCTTCAGGAGGAGAAATCTGTTGAGGCTTCCCGGGAGGAAGCCGCAGTGGGTTCAAATGAGGATGCAAATTGTGATCCTGCAAGCACTGGCGATCGTAGTGTTGATTTACCTATCCCTGATAATGAAACCAATACCCAAATCACTGAAATGAGATCAAATGGTGCAGAAAAATGTGATGTTCAACTGTCAGGTGGTACTCTCTGTTCTGAAGCTGTACCAGCTAGCATCAGTGAGACTGTTTGCCCCATCCTGAATTCAGATTCCAACACGAATTCAGATTCAGTTGATGTTGATCCTTCATTTGTGGCTGAAAAGAAAGGTAGTATTGAGACTGTTGTTACTGAAGATGGAAAGAAACAAGCTATGGATGTTGTTACTGAAGATGAAAAGAAACAAGATGTGGATTATGAAGGCAGCAGTCTAGAAGAGATGCCCCTGAGAAGTGCATTTTCTTACACTCATGAAGTCAAAGAGAGGTTTAATAGAATTCTCAAAAAATATGTTGGAACACACAATTTCCACAACTTCACCACCAGAACTAAAGCGGAGGATCCTGCAGCCAAAAGGTTCATCATTTCCTTTGCTGCTGATCGTGTAGTGAATTTGGATGGGATTGATTTTATCAGGTGCGAGGTTGTTGGGCAGAGTTTCATGCTCCATCAGATTAGGAAGATGATTGGCCTTGCTGTTGCTGTGATGAGGAACTGTGCTCCTGAGTCAATCTATGATGTAGCGTTCCGCAAGGATGTCAATCTTAATGTGCCTACTGCGCCTGAGGTTGGGCTGTACTTAGATGAATGCATGTTCACTTCATATAACAAGAAATGGAAGGATTCACATGAGGCGGTTTCTATGGAACCTTATTCTGAGGAGGCTGAAGAGTTTAAGCTCAAGTATATATTCCCTCATATCGCTGCAATGGAGCACAAGGAGGGAGCTGTAGCTCTCTGGTTGCATTCGTTGAACAGCAGAAATTATCCAGATTTTCGCTACATGGATAATGCTGGAACTGAGGCAAGTATTGCTGCTGCAGTTGAGAGTGTTGATGAAGGGACGGTGCCAAGTGATAATATTAGTGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAAASPPASPPHPKRPKMSSSSDPDQEPTSPSAAGADGAQPRAPRYKRRKVAILLGYCGAGYQGMQKNPGARTIEGDLEEALYRAGAVPEADRAAPRRYDWARAARTDKGVSAAAQVVSGRFYVDPPVFTDRLNAQLAPQIRAFGYVRVTNSFNAKKFCDRRRYVYLLPVFALDPSAHPDREAVMASVGSGSELTKCLECSERGRKVPGVMGREGKVPDPALQEEKSVEASREEAAVGSNEDANCDPASTGDRSVDLPIPDNETNTQITEMRSNGAEKCDVQLSGGTLCSEAVPASISETVCPILNSDSNTNSDSVDVDPSFVAEKKGSIETVVTEDGKKQAMDVVTEDEKKQDVDYEGSSLEEMPLRSAFSYTHEVKERFNRILKKYVGTHNFHNFTTRTKAEDPAAKRFIISFAADRVVNLDGIDFIRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYSEEAEEFKLKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYMDNAGTEASIAAAVESVDEGTVPSDNISE</aaseq>

Gene Sequence

<dnaseqindica>1..1406#1499..1838#ATGGCTGCCGCCTCGCCACCGGCCTCCCCGCCTCACCCCAAGCGCCCCAAGATGTCCTCCTCCTCCGACCCCGACCAGGAGCCCACCTCGCCTTCCGCCGCTGGCGCCGACGGCGCGCAGCCCCGCGCCCCCCGGTACAAGCGTCGCAAGGTGGCCATCCTGCTCGGCTACTGCGGCGCGGGGTACCAGGGCATGCAGAAGAACCCGGGCGCGCGCACCATCGAGGGGGACCTGGAGGAGGCGCTCTACCGGGCCGGCGCCGTGCCCGAGGCCGACCGCGCCGCGCCCCGCCGCTACGACTGGGCCCGCGCGGCGCGCACCGACAAGGGCGTCAGCGCCGCGGCGCAGGTCGTCTCCGGCCGCTTCTACGTCGACCCGCCCGTCTTCACTGATCGCCTGAATGCGCAGCTCGCGCCCCAGATCCGCGCCTTCGGCTACGTCCGCGTCACCAACTCGTTCAACGCGAAGAAGTTCTGCGACCGCCGGAGGTATGTGTACCTGCTGCCCGTGTTCGCGCTCGACCCCAGCGCGCACCCCGACCGTGAGGCCGTCATGGCGAGCGTTGGGAGTGGGAGCGAGCTTACGAAGTGCCTTGAGTGCTCAGAGAGGGGTAGGAAGGTGCCCGGTGTCATGGGCCGGGAGGGTAAGGTACCCGATCCTGCCCTTCAGGAGGAGAAATCTGTTGAGGCTTCCCGGGAGGAAGCCGCAGTGGGTTCAAATGAGGATGCAAATTGTGATCCTGCAAGCACTGGCGATCGTAGTGTTGATTTACCTATCCCTGATAATGAAACCAATACCCAAATCACTGAAATGAGATCAAATGGTGCAGAAAAATGTGATGTTCAACTGTCAGGTGGTACTCTCTGTTCTGAAGCTGTACCAGCTAGCATCAGTGAGACTGTTTGCCCCATCCTGAATTCAGATTCCAACACGAATTCAGATTCAGTTGATGTTGATCCTTCATTTGTGGCTGAAAAGAAAGGTAGTATTGAGACTGTTGTTACTGAAGATGGAAAGAAACAAGCTATGGATGTTGTTACTGAAGATGAAAAGAAACAAGATGTGGATTATGAAGGCAGCAGTCTAGAAGAGATGCCCCTGAGAAGTGCATTTTCTTACACTCATGAAGTCAAAGAGAGGTTTAATAGAATTCTCAAAAAATATGTTGGAACACACAATTTCCACAACTTCACCACCAGAACTAAAGCGGAGGATCCTGCAGCCAAAAGGTTCATCATTTCCTTTGCTGCTGATCGTGTAGTGAATTTGGATGGGATTGATTTTATCAGGTGCGAGGTTGTTGGGCAGAGTTTCATGCTCCATCAGATTAGGAAGATGATTGGCCTTGCTGTTGCTGTGATGAGGAACTGTGCTCCTGAGTCAATCTATGATGTAGCGTTCCGCAAGTAAGTTCCATACAAGAGTACTGCAGTTTTATATAGTTCAACAGATATTATTTGCATGCTAATTGATTTCTTTTATCATGTTTCTGTTACAGGGATGTCAATCTTAATGTGCCTACTGCGCCTGAGGTTGGGCTGTACTTAGATGAATGCATGTTCACTTCATATAACAAGAAATGGAAGGATTCACATGAGGCGGTTTCTATGGAACCTTATTCTGAGGAGGCTGAAGAGTTTAAGCTCAAGTATATATTCCCTCATATCGCTGCAATGGAGCACAAGGAGGGAGCTGTAGCTCTCTGGTTGCATTCGTTGAACAGCAGAAATTATCCAGATTTTCGCTACATGGATAATGCTGGAACTGAGGCAAGTATTGCTGCTGCAGTTGAGAGTGTTGATGAAGGGACGGTGCCAAGTGATAATATTAGTGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008779