Os12g0595600

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Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0595600| Description = SKP1 component family protein| Version = NM_001190113.1 GI:297729356 GeneID:9270435| Length = 2619 bp| Definition =...")
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Gene Name

Os12g0595600

Description

SKP1 component family protein

Version

NM_001190113.1 GI:297729356 GeneID:9270435

Length

2619 bp

Definition

Oryza sativa Japonica Group Os12g0595600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25208164..25210782

Sequence Coding Region

25208164..25208346,25209227..25209325,25210471..25210782

Expression

GEO Profiles:Os12g0595600

Genome Context

<gbrowseImage1> name=NC_008405:25208164..25210782 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25208164..25210782 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatggcgatggcgatggcgatggaggcggcgccggcgccggtgccgctgccgctggtgctgcggttccggaacggcgaggaccgcttcgcgctcaccgaccagccgaggcaactccccttggggtacgcgatcgacgccccctccattcgctccgcccgcaccttcggcctcctcgacgagtacgcgcgggtccacgcgcagcacgcgcggggcggccccggcgccgtgcccgacatcgccgcctgggaccgcgccttcatggagcgggaggtcaccgacaccgacgagctccacgacctcttcatggctgtggtaggctggatcacaaggaaggttgacacgacggaatggttctggttgcgggcctctcttacgaccggctctgccctatgggtagcagaggaggctgcgtcgacgctggaaatggacgggctgagtgtactgtgtgcacagaagacggcggacgtcgtcaagaagcgcaccgtggaggaggtcaaggcgctgctcggcatcgccgacgtcggcatgacgccggaggaggagctcaagctccagcacgacaacgatgccatcctctgcctccgttaa</cdnaseq>

Protein Sequence

<aaseq>MAMAMAMAMEAAPAPVPLPLVLRFRNGEDRFALTDQPRQLPLGY AIDAPSIRSARTFGLLDEYARVHAQHARGGPGAVPDIAAWDRAFMEREVTDTDELHDL FMAVVGWITRKVDTTEWFWLRASLTTGSALWVAEEAASTLEMDGLSVLCAQKTADVVK KRTVEEVKALLGIADVGMTPEEELKLQHDNDAILCLR</aaseq>

Gene Sequence

<dnaseqindica>2437..2619#1458..1556#1..312#atggcgatggcgatggcgatggcgatggaggcggcgccggcgccggtgccgctgccgctggtgctgcggttccggaacggcgaggaccgcttcgcgctcaccgaccagccgaggcaactccccttggggtacgcgatcgacgccccctccattcgctccgcccgcaccttcggcctcctcgacgagtacgcgcgggtccacgcgcagcacgcgcggggcggccccggcgccgtgcccgacatcgccgcctgggaccgcgccttcatggagcgggaggtcaccgacaccgacgagctccacgacctcttcatggtaaaaaccttgatcgcctctcgcctgcttgattgatgcgtcccctcgctcccaaccccgttcccttgccaggccctgtttgatggattggttgattatatttgcttccattttgttttggtttaattgcctgcaccgatgatatgatagttggttattctgtttgtgtagtactacctccgtcccaaaatgtagctacctagtacgtgatgtcacattacctggtaatacgattcgtagtcctaggtaatgtcacatcccgtactaggtaactatattttgcgacggaggaagtattggattagaacagtggattccaaatgagtacctgtatgctttgttggattttgacaggaaataatttcagaaaagaatttctagaccgaaggtccaaatcaggcagggtttggtaaaaccccccaacttctagaggaggcatgtacttgattacatggaattaagcatgatagattgatagatatattggcgtgtgcttttggttgcaatcgagcgtgttatcgtaatctgttagtgctaattgttgttgattaacaataagatacctgcgcattgctgtggcaaatcttagtactacacaggcacagagcacagatcgagggtacgaacaatatcaagtaatatatgatatttggttgctcatgatccgaggaatggtgatggattcagaatgtaagattgtgtgctattgtagatttattatactatgaagaagaatgctgtagggcgagtactacgtggtttgccatcttctaaaaaaatgtactagtatataattgtattggtgagtgttaatggtaaactgtatgggatgctcaggtggtagttccggtaggaactgttagtctggccgtctgggattgatttcctagtgccatggcaaaatgcgatgcatgacatgttaatgataacaagtactaaaatagtggaaatgatgccatgcataacatgttaatgataataagtaggagtataaaatagtggacatgagcaatctctttgttatggtgggtggtcaaggcgacggcaggggaacgtgtatgctctgggtatgagtatgctagctccggtatttttataatgaactctgatggtaaggcaaatggagactaggccccggtgggtaggctgtggtaggctggatcacaaggaaggttgacacgacggaatggttctggttgcgggcctctcttacgaccggctctgccctatgggtagcagaggaggtatatgtatactgagcgcttgtagaggttagaggcagaggaagaggaatgtttggaggccttttgggtccctaactaatcagatatgtagagacttcatccagcattgaaaatgatcggtttgggctgggatatgtagttggtaatctgaggtgtggaagtatcattcataggtctagaacattgaggtgatgtggctttcacctaggggctccatcgtagcaataactgtggttagtgcaactcaactgtatagaattatgtttgtactacagctaaatgtggttagtgcgacacaaccgtataggattatgtttatactacagcttgctgctatagataatgtaggttttcatgttttgtgctttggtagactggtagtcgtatacaatgtgagtctgtttgtggaaatgttgcagcataggcacctatctaacctgttccatagaaaggtatgaatgatgttgtgtgcaaagtgcatatgcatataacagcttcatgatggatggttgaatttaatgtgtttaaccttctgcctattctgttctgtccttagatgttgcatataatcttggtcatggctgatgtcccaatagagtactttctagcttggaatcatgcatgctcacaggtgcacgccacttatatatccatctgatgactgatgagctgcacagctgattgtttagtaagcagcacatgacaatatgacatcagaacctgtcgtctcacaaatctgaagattaatgtttagcttcttgcttctagtgagagattacttggtctgtggccttctgtcaagtgccttgtgcatgtatgcatagtgagatgactgactgatacatctgtgattctgtgtacatgttgatgatggatgtaggctgcgtcgacgctggaaatggacgggctgagtgtactgtgtgcacagaagacggcggacgtcgtcaagaagcgcaccgtggaggaggtcaaggcgctgctcggcatcgccgacgtcggcatgacgccggaggaggagctcaagctccagcacgacaacgatgccatcctctgcctccgttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0595600, RefSeq:Os12g0595600