Os12g0595800

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Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0595800| Description = Protein kinase-like domain containing protein| Version = NM_001073714.1 GI:115489389 GeneID:4352691| Length = 4430 b...")
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Gene Name

Os12g0595800

Description

Protein kinase-like domain containing protein

Version

NM_001073714.1 GI:115489389 GeneID:4352691

Length

4430 bp

Definition

Oryza sativa Japonica Group Os12g0595800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25225709..25230138

Sequence Coding Region

25225756..25226653,25227823..25227864,25228733..25229970

Expression

GEO Profiles:Os12g0595800

Genome Context

<gbrowseImage1> name=NC_008405:25225709..25230138 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25225709..25230138 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacctcgccggcggccgcctcctcctcctcctctgcgtcggcgtgcaattcctcttgattctcccctatggagctctctccgccagccccgccgccgccgccaccggcggagatgagcggtgcaggaggaagtgcggtgggttggatgtcccctaccctttcggcttctccggcgactgccccatcctgctggcctgcgacgagggcaactccacggcggcgctgctccgcccgaccaacggcacgtcgacgaccatggagccgttgtcgtacgccgtcgtcggcaagtcgttcaactcgaccgcctccaccttcgtcgtctccctcctgccttcctgcaaccgcaccgtctccgacgcgaggctgtggctcaccggcgccaactacggcgtgtcgtcgagcaccggcctgttcgtccgcggctgtcagaacgcgaagaacaacagctgcagcgtccccgccgaagccatgtcctcgatgctcaccacagcgaagtgcggcggcggcggcggcggcaacggaaccgcgtcgtcgccggtgacgtgcatcccgacgatgtcgacggaggcggacatggcgaagggtgtgggcctgttcgcgcagtgggacaaggtcgaggagcctagatgcgacaacctgctgacatccgtgtacggcgagacgacgaacgatggggtgttcacgctggagatcgccgtggcggagatggggtggtgggtcaacgggaactgcagcaaccacagcgccgccgccgctgacctcgtcgggctgtgcgcggcgaacgcgacgtgccacgacgtgcggaccccgagcggggcgtggggacaccagtgcaggtgtctggaggggatggacggcgacgggttcgccgccggcgaaggatgccactttcccgctaagaagagctctacgaagaaaatccttatcatagttggaggtgtcttggcgggaacggtggcggccggagtgctcttcctctgctgcgcgcgttgccggcgatccggcggcggcggcggccggtccggcttcgacaggctggcggcgaagcggctgctgtcggaggcggcgtcgtcgagcggcgtgccggtgtactcgtaccacgaggtggcgcgcgccaccaactccttctcccacacgcaccgcctcggcacgggcgcctacggcacggtctacgtcggcaagctgccggcgagctcgccgtcgctggtggcgatcaagcggatgcggcggcggcacgacgacggcgacgacgacgccgccgtggcggtgctcctcaacgaggtgaagctcatctcgtcgctgagccacccgggcctcgtccgcctgctcggctgctgcctagaccgcggcgagcagatcctcgtctacgagttcgtccccaacggcacgctcgcccaccacctcgccggtggggggctcccatggcgcgcgcggctcggcgtcgcggcggagacggcggcggcgatcgcctacctgcacgccaagcggccgcccatcctccaccgcgacgtcaagtccagcaacatcctcctcgacggcgacctccgccccaggctcgccgacttcggcctctcccgcgccgtcggccgcctcgaccaggcgtcgctgtcgcacgtctcgacggcgccgcagggcacgccggggtacctcgacccggagtaccaccagaacttccacctctccgacaagagcgacgtctacagcttcggcgtcgtcctcctcgagctcatcaccgccatgaaggtcgtcgacttcgcccgccccgcggcggaggtcaacctcgcgtcgctcgctctcgaccgcatcgggaaggggcgcgtcgacgacattgtcgacccggcgctcgtcgaccgcgccgacgagtgggtgatgcgctccgtccgccatgtcagcgagctcgcgttccggtgcctggcgttccagaaggacgtcaggccggccatgagcgaggtcgccgccgagctcgcccggatcagggacgccgcgccggcgtccgtgccgggagcccggaccggagccggcagccgcccgcccatggtgatcgacgtcggcgtcggcttcgacggcgtcgacgccgcggtgaagaaggtcgggtcgccggtgtcggtgcaggacgtgtgggtcagcgaccagagctcgccgtcgaccaacggctccatgccgcgatttgcttag</cdnaseq>

Protein Sequence

<aaseq>MHLAGGRLLLLLCVGVQFLLILPYGALSASPAAAATGGDERCRR KCGGLDVPYPFGFSGDCPILLACDEGNSTAALLRPTNGTSTTMEPLSYAVVGKSFNST ASTFVVSLLPSCNRTVSDARLWLTGANYGVSSSTGLFVRGCQNAKNNSCSVPAEAMSS MLTTAKCGGGGGGNGTASSPVTCIPTMSTEADMAKGVGLFAQWDKVEEPRCDNLLTSV YGETTNDGVFTLEIAVAEMGWWVNGNCSNHSAAAADLVGLCAANATCHDVRTPSGAWG HQCRCLEGMDGDGFAAGEGCHFPAKKSSTKKILIIVGGVLAGTVAAGVLFLCCARCRR SGGGGGRSGFDRLAAKRLLSEAASSSGVPVYSYHEVARATNSFSHTHRLGTGAYGTVY VGKLPASSPSLVAIKRMRRRHDDGDDDAAVAVLLNEVKLISSLSHPGLVRLLGCCLDR GEQILVYEFVPNGTLAHHLAGGGLPWRARLGVAAETAAAIAYLHAKRPPILHRDVKSS NILLDGDLRPRLADFGLSRAVGRLDQASLSHVSTAPQGTPGYLDPEYHQNFHLSDKSD VYSFGVVLLELITAMKVVDFARPAAEVNLASLALDRIGKGRVDDIVDPALVDRADEWV MRSVRHVSELAFRCLAFQKDVRPAMSEVAAELARIRDAAPASVPGARTGAGSRPPMVI DVGVGFDGVDAAVKKVGSPVSVQDVWVSDQSSPSTNGSMPRFA</aaseq>

Gene Sequence

<dnaseqindica>48..945#2115..2156#3025..4262#ggctgaaatattagtttcgctcgcctgccgagctagccaaactcaagatgcacctcgccggcggccgcctcctcctcctcctctgcgtcggcgtgcaattcctcttgattctcccctatggagctctctccgccagccccgccgccgccgccaccggcggagatgagcggtgcaggaggaagtgcggtgggttggatgtcccctaccctttcggcttctccggcgactgccccatcctgctggcctgcgacgagggcaactccacggcggcgctgctccgcccgaccaacggcacgtcgacgaccatggagccgttgtcgtacgccgtcgtcggcaagtcgttcaactcgaccgcctccaccttcgtcgtctccctcctgccttcctgcaaccgcaccgtctccgacgcgaggctgtggctcaccggcgccaactacggcgtgtcgtcgagcaccggcctgttcgtccgcggctgtcagaacgcgaagaacaacagctgcagcgtccccgccgaagccatgtcctcgatgctcaccacagcgaagtgcggcggcggcggcggcggcaacggaaccgcgtcgtcgccggtgacgtgcatcccgacgatgtcgacggaggcggacatggcgaagggtgtgggcctgttcgcgcagtgggacaaggtcgaggagcctagatgcgacaacctgctgacatccgtgtacggcgagacgacgaacgatggggtgttcacgctggagatcgccgtggcggagatggggtggtgggtcaacgggaactgcagcaaccacagcgccgccgccgctgacctcgtcgggctgtgcgcggcgaacgcgacgtgccacgacgtgcggaccccgagcggggcgtggggacaccagtgcaggtgtctggaggggatggacggcgacgggttcgccgccggcgaaggatgccactttcccggtgagtcctctctatagctttcggccgtcgtaggtgggtggggcccacttcccggcgctccacgtcagctccattcatgaaagtcatcggtgcggtcaatcacgggcgagacaatctaggggctctgctttgctttggtctgtttggaatttcattggaaaagtggattgcatttttcagatttgctagaaaactttcgtatgtttttcttgtcaaaagaaattttagattcgtggcaatcagatcttctcgagatttgtacaggaagagaaaaaatattaaaaataagttttcacgcatgtcacgtgtaattaagatactagtgctaactaactaaaccgtggtttaatgtaagttttatataaattatattgtagttacaatatagttataatacgattataatgcagttacattaaattatatcatagttacatctgaaagttttttactcaaaactgtagcagtattttgagatactcccacattttataattataaaattataagccgatcgatttggtaagggaagaaatgagtttcagaccaactaaagccttttattaggaacagaggaattttgctgcaatttttaagtaatgagttaatagttcagtaaaattgttgtgcttcaaaatagccttatgagagaaatagctgccgattttgtatagctgtaagcgtgcgattttcaaagatggcgactttggtttgaacaacaagaattgtctgcataaatcagcatattagtttgtcacattttgacatgatgcatctgatgataccgatcaatgcctacggcaataaatagcctcatcaaactctttgaccggaatttagttatttttagaagaaaaacaccaaattttcaagcatcagtactcaaattgaattccaccttcttttggttcagtggtctgtatttggaaaatttatctgttgaattttctcatcttaatgcatagacaattttggtgggagctatcctcacgtggagagacaattttgtcataaatcaagtcaattttgctcttaacagaaaaccaaccaactgctaccaaaaacctgatccaatttatgatgttcagcatggccaattctgcccatattttgcaaactgaaataaatatgaaggtctgaccaatttttttttctctccatttttgcagctaagaagagctctacgaagaaaatccttatcatagttggaggtaaaaaaaaatgttactccttgccttatgcttgagttttactgttctttttaatacatgttggagtttactccgtataacgttaatctgtcacaatacagtatcgtgtacgacgctgcgtagagtcaaattgttgcgatcaagtcaagtttgtcgtaaatttttatttctacaacttacgtggaatggctgccatgcatgctgactcctgacctggaaactctaaggaaaaaaatcaagaatattctttggagcaaaaaaaaaaaacgcccccttttgcatccaacaattctgcgtatttgtttttgccgcatgagaagattgacttacacttgggttaagcgcataattgtcatgagaatttcataagatgtacctcgtggaaaaggtcaaatttagctcgcagtaatccaaattaattagcataattacagtgaactaagtagactggaagtgtaattaggagtgtaggactaattaatctttgaccaaataactaattactcccccggttaataatacttattattttggataagagcacggtctaaaaaaacaaattttgaccattatttttttattataatatatataaaagtgttaagaaatatatggttttagtaaagtactttttaaatacttttctatacatgtagttaacatatttaaaagacgaatatttttaaaataatttataatcaaatattttaaagtttaactttacctttatctaaaacaacaacgagtattatgagcggagtagcataattacagtggactggaagtgtaattaggagagtactatttaatctttgaccaactaattatcatgattgcttgggttaattaattaattaattaatttcaggtgtcttggcgggaacggtggcggccggagtgctcttcctctgctgcgcgcgttgccggcgatccggcggcggcggcggccggtccggcttcgacaggctggcggcgaagcggctgctgtcggaggcggcgtcgtcgagcggcgtgccggtgtactcgtaccacgaggtggcgcgcgccaccaactccttctcccacacgcaccgcctcggcacgggcgcctacggcacggtctacgtcggcaagctgccggcgagctcgccgtcgctggtggcgatcaagcggatgcggcggcggcacgacgacggcgacgacgacgccgccgtggcggtgctcctcaacgaggtgaagctcatctcgtcgctgagccacccgggcctcgtccgcctgctcggctgctgcctagaccgcggcgagcagatcctcgtctacgagttcgtccccaacggcacgctcgcccaccacctcgccggtggggggctcccatggcgcgcgcggctcggcgtcgcggcggagacggcggcggcgatcgcctacctgcacgccaagcggccgcccatcctccaccgcgacgtcaagtccagcaacatcctcctcgacggcgacctccgccccaggctcgccgacttcggcctctcccgcgccgtcggccgcctcgaccaggcgtcgctgtcgcacgtctcgacggcgccgcagggcacgccggggtacctcgacccggagtaccaccagaacttccacctctccgacaagagcgacgtctacagcttcggcgtcgtcctcctcgagctcatcaccgccatgaaggtcgtcgacttcgcccgccccgcggcggaggtcaacctcgcgtcgctcgctctcgaccgcatcgggaaggggcgcgtcgacgacattgtcgacccggcgctcgtcgaccgcgccgacgagtgggtgatgcgctccgtccgccatgtcagcgagctcgcgttccggtgcctggcgttccagaaggacgtcaggccggccatgagcgaggtcgccgccgagctcgcccggatcagggacgccgcgccggcgtccgtgccgggagcccggaccggagccggcagccgcccgcccatggtgatcgacgtcggcgtcggcttcgacggcgtcgacgccgcggtgaagaaggtcgggtcgccggtgtcggtgcaggacgtgtgggtcagcgaccagagctcgccgtcgaccaacggctccatgccgcgatttgcttagctctcgatttgacttgtaattcaaagaggaatctgaatttgatgtgaatttaacatttttttgatgtgtcgaaatgtgtgctacttagcctagttctaagacatggcaaagtatttcatatgccgaattgaaaaaacgtttgctgtatagctaaagttggactagcac</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0595800, RefSeq:Os12g0595800