BGIOSGA008808

From RiceWiki
Revision as of 03:21, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008808| Description = BGIOSGA008808| Definition = Oryza sativa Indica Group BGIOSGA008808, complete gene.| tag = | tid = BGIOSGA008808-TA|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008808

Description

BGIOSGA008808

Definition

Oryza sativa Indica Group BGIOSGA008808, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA008808-TA

Ensembl Protein ID

BGIOSGA008808-PA

Length

3223

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:29501843..29505065

Sequence Coding Region

29501843..29501895,29502261..29502381,29502492..29502803,29502918..29503022,29503113..29503567
,29503710..29503840,29503961..29504014,29504124..29504493,29504594..29504727
,29504827..29505065

Genome Context

<gbrowseImage1> name=IndicaChromosome02:29501843..29505065 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:29501843..29505065 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTAATTTCGGGAAGAGACTGATGGCGGACCAATTGGAGGAGTGGAAAGAGTACTACATCAATTACAAAATGATGAAGAAAAAGGTAAAACAGTATGTTCAGCAGACGCAGAATGGTGGAAGAAATCGTGAACAGGTTCTTAAAGAGTTCTCAAGGATGCTTGATGATCAGATTGAGAAGATTGTGCTCTTTCTTCTGCAACAACAAGGCCATCTTGCTAGCAGAATCGAGAAATTGGGAGAAGAGCGTGCATTGCTCATGGAACAAGCAGATGCATCCCAAATTTCTGAGCTACGAGAGGCATATAGGGAGGTTGGAATTGATCTTATGAAGCTCCTTAGATTTGTTGATATGAATGCTACCGGCATCCGAAAAATACTCAAGAAATTCGATAAGCGTTTTGGCTACAAATTCACGGACTATTACGTCTCCACTCGTGCAAACCATCCCTGTTCCCAGCTTCAGCAGATCTTCAAGCAAGTGGGTATTGTGGCTGTAGTTGGTGCTTTGTCGCGCAACCTTGCATTTCTCCAAGATCATCAAGGAAACTTTCCATCCATCTATGATCATCCATCAATTACCTTAAAGGACCCTATCATAGAACAAATAAATCATTCGGTGCAGAAACTCACACACGCAACAAACTTACTGCAATTCATAGGGCAACATGCACTTATCATTCCAGAAGATATGCATAGTGGCTCAGAAGATCTTGTCGATGACCAGAGCTACCATTTCATGTCGCTGCTTCTGAACCTAGCTAACACATTTCTTTACATGGTGAACACATACATCATCGTGCCGACTGCAGATGACTACTCAGTCAGCCTCGGAGCAGCAGCTACCGTTTGCGGCGTGATCATCGGATCGATGGCTGTTGCTCAAGTGTTCTCTTCAGTTTACTTCAGTGCCTGGTCAAATAAGTCATATTTCAGGCCCCTCGTGTTCAGCAGCATTATGCTGTTTTTGGGTAACCTGCTGTATGCTTTGGCATATGATGTGAATTCCTTAACTGTTCTTATAGTTGGCCGGCTGCTCTGCGGGTTGGGTTCTGCCAGAGCAGTGAACCGCAGGTACATCAGCGACTGTGTGCCTCTCAAAACCAGGCTGCAGGCATCTGCAGGATTTGTTAGTGCTAGTGCTCTTGGAATGGCCTGTGGTCCTGCTCTTGCCGAGCCAGACCACATTGTTAGAGAGAATTCAGTCAACACACCGTCATCTGATTCAGGCCATCGAAGAAATAGTAATTTGGAAGATGGTCTAGCACAGCCTTTTCTCATAGATGCAAAGGAGAGTCTGGATGAAAATGGAGAGGATAATGACGAAAATGAAGAAGACCCTGAAGACTCACATAAACCAGCAACATCACTTGCTGCAGCATACAGATTGCTGACACCATCTGTGAAAGTTCAGCTATTGATCTACTTTATGCTCAAGTTTGCAATGGAAATTCTACTGTCCGAGTCGAGCGTGGTCACTACGTTCTACTTCAACTGGTCTACAAGCACCGTGGCCATGTTTCTAGCAGTTCTTGGGTTGACAGTTCTTCCTGTAAATGTCATCGTTGGGAGCTATGTCACCAACTTGTTCCAAGACAGGCAAATTTTAGTGGCATCGGAAATCATGGTCCTGATCGGCATAGCCATGAGCTTCCGTTTCACCTCTCACTACTCCGTCCCGCAATACGTCTCCTCGGCTCTCATCACGTTCGTCTTCGCTGAGGTGCTCGAAGGAGTGAACCTGTCCCTCCTTTCCCGGGTGATGTCGTCGAGGCTCTCGCGCGGAACCTACAACGGCGGGCTCCTCTCGACGGAAGCCGGCACTTTGGCTCGCGTCGCGGCGGACATGACGATCACGGCGGCGGGTTACCTTGGCCAGAACAGCCTCCTGAATGTAACCCTGCTTCCGTCCTTCGTGATCTGCGTAGCTTCCATCGTCGCGACATTTTGCACCTATAACTCCCTGTACTGA</cdnaseq>

Protein Sequence

<aaseq>MVNFGKRLMADQLEEWKEYYINYKMMKKKVKQYVQQTQNGGRNREQVLKEFSRMLDDQIEKIVLFLLQQQGHLASRIEKLGEERALLMEQADASQISELREAYREVGIDLMKLLRFVDMNATGIRKILKKFDKRFGYKFTDYYVSTRANHPCSQLQQIFKQVGIVAVVGALSRNLAFLQDHQGNFPSIYDHPSITLKDPIIEQINHSVQKLTHATNLLQFIGQHALIIPEDMHSGSEDLVDDQSYHFMSLLLNLANTFLYMVNTYIIVPTADDYSVSLGAAATVCGVIIGSMAVAQVFSSVYFSAWSNKSYFRPLVFSSIMLFLGNLLYALAYDVNSLTVLIVGRLLCGLGSARAVNRRYISDCVPLKTRLQASAGFVSASALGMACGPALAEPDHIVRENSVNTPSSDSGHRRNSNLEDGLAQPFLIDAKESLDENGEDNDENEEDPEDSHKPATSLAAAYRLLTPSVKVQLLIYFMLKFAMEILLSESSVVTTFYFNWSTSTVAMFLAVLGLTVLPVNVIVGSYVTNLFQDRQILVASEIMVLIGIAMSFRFTSHYSVPQYVSSALITFVFAEVLEGVNLSLLSRVMSSRLSRGTYNGGLLSTEAGTLARVAADMTITAAGYLGQNSLLNVTLLPSFVICVASIVATFCTYNSLY</aaseq>

Gene Sequence

<dnaseqindica>1..53#419..539#650..961#1076..1180#1271..1725#1868..1998#2119..2172#2282..2651#2752..2885#2985..3223#ATGGTTAATTTCGGGAAGAGACTGATGGCGGACCAATTGGAGGAGTGGAAAGAGTATGTTGATTTTGAACTCTGAAAGTTCCTTAACATTTTGCCATGTGGATGCACTGATCTGAATAGGGTATAAGTGGGTCGACCCGCGAACCCACTTATTTGGCCTATAAGTGGGCTTGCGGGTTGGCCCACTTACACCGATTGATATGCATAAATTAGATGTATATGTCTTTTTGAAAGAAAAAAAAGAGCATAATGTGGATGTTGCTTGATTGCCCACCATTTCCTTTTCCTTGAAGTTATGAATGAAATTTGTGAATTGTAATATACGGAAACAGGTAGTGAAAGGAGACTGAATCCTGTACAGAAGCCATACTTCTGATCTTCTAAATATTGTTACTAATTATTTATTTTTGCTATTGTAGGTACTACATCAATTACAAAATGATGAAGAAAAAGGTAAAACAGTATGTTCAGCAGACGCAGAATGGTGGAAGAAATCGTGAACAGGTTCTTAAAGAGTTCTCAAGGATGCTTGATGATCAGGTAAAACAGACTGAATTTCCTTCAAAATATGAAAGAAAGAAAAGACCTGAGTTGTTGATAAAAAATGTCGTTCTTGTTTTACCACTTAACATCAAGTTTCTTTTGTGTAGATTGAGAAGATTGTGCTCTTTCTTCTGCAACAACAAGGCCATCTTGCTAGCAGAATCGAGAAATTGGGAGAAGAGCGTGCATTGCTCATGGAACAAGCAGATGCATCCCAAATTTCTGAGCTACGAGAGGCATATAGGGAGGTTGGAATTGATCTTATGAAGCTCCTTAGATTTGTTGATATGAATGCTACCGGCATCCGAAAAATACTCAAGAAATTCGATAAGCGTTTTGGCTACAAATTCACGGACTATTACGTCTCCACTCGTGCAAACCATCCCTGTTCCCAGCTTCAGCAGATCTTCAAGCAAGTGGTAAATTCTCTTTCTTGCATCTTCGAAAACATAATTTGCGCTGTGAGGTTATATTGTTCCTTATAACTTTGCACTTGACACCTCATGTACTTATGATGCAGTTTATGGGTGCAGGGTATTGTGGCTGTAGTTGGTGCTTTGTCGCGCAACCTTGCATTTCTCCAAGATCATCAAGGAAACTTTCCATCCATCTATGATCATCCATCAATTACCTTAAAGGTACTCCATTTCTTGTTAAATGTTCACATGACAAGATCAGACATTTATGCTGTAAAATGGAGTGAACTAACTTTCCTTCTGATGCCTCAGGACCCTATCATAGAACAAATAAATCATTCGGTGCAGAAACTCACACACGCAACAAACTTACTGCAATTCATAGGGCAACATGCACTTATCATTCCAGAAGATATGCATAGTGGCTCAGAAGATCTTGTCGATGACCAGAGCTACCATTTCATGTCGCTGCTTCTGAACCTAGCTAACACATTTCTTTACATGGTGAACACATACATCATCGTGCCGACTGCAGATGACTACTCAGTCAGCCTCGGAGCAGCAGCTACCGTTTGCGGCGTGATCATCGGATCGATGGCTGTTGCTCAAGTGTTCTCTTCAGTTTACTTCAGTGCCTGGTCAAATAAGTCATATTTCAGGCCCCTCGTGTTCAGCAGCATTATGCTGTTTTTGGGTAACCTGCTGTATGCTTTGGCATATGATGTGAATTCCTTAACTGTTCTTATAGTTGGCCGGCTGCTCTGCGGGTATGGAATGTCTTGTTCTTTTTGATCTAGTACTTATGCTTTTTTTTTGTTAGCTTCCTGAAACTTTGTAATGTTTGTTGTGCTCGTTTAATCATTGCAATATAAAGCTGTTCTAGTGATCACACTGATATATGTTGTGTAGGTTGGGTTCTGCCAGAGCAGTGAACCGCAGGTACATCAGCGACTGTGTGCCTCTCAAAACCAGGCTGCAGGCATCTGCAGGATTTGTTAGTGCTAGTGCTCTTGGAATGGCCTGTGGTCCTGCTCTTGCCGGTTTGCTGCAGACAAATTTTAAGATCTACGGTTTTACATTTGATCAGAACACGTTGCCCGGGTGGATCATGTGCTTGGCTTGGATTACGTACTTATTTTGGTTGTGGATTTCATTTAAAGAGCCAGACCACATTGTTAGAGAGAATTCAGTCAACACACCGTCATCTGATTCAGGTAAAATTTCTCCGTTGCATAGTTTAAAACATAGTTTGAGAAGTTATGCCAAGGACATGATGGTAAATGCTCTGAAAATAGTAATTAAGTAATTTGCTTTGCATAGCAGGCCATCGAAGAAATAGTAATTTGGAAGATGGTCTAGCACAGCCTTTTCTCATAGATGCAAAGGAGAGTCTGGATGAAAATGGAGAGGATAATGACGAAAATGAAGAAGACCCTGAAGACTCACATAAACCAGCAACATCACTTGCTGCAGCATACAGATTGCTGACACCATCTGTGAAAGTTCAGCTATTGATCTACTTTATGCTCAAGTTTGCAATGGAAATTCTACTGTCCGAGTCGAGCGTGGTCACTACGTTCTACTTCAACTGGTCTACAAGCACCGTGGCCATGTTTCTAGCAGTTCTTGGGTTGACAGTTCTTCCTGTAAATGTCATCGTTGGGAGCTATGTCACCAACTTGTTCCAAGACAGGTAAGCATACATACTAGCACTAGCACATTAAGTTTTGTTTCCTTTTCCACTATAATCCTCAATGTTTAATTTCCACTCGTTTCTCTTTTGTTTTCTTTAGGCAAATTTTAGTGGCATCGGAAATCATGGTCCTGATCGGCATAGCCATGAGCTTCCGTTTCACCTCTCACTACTCCGTCCCGCAATACGTCTCCTCGGCTCTCATCACGTTCGTCTTCGCTGAGGTGCTCGAAGGTAAGTGACAGTAAACAAGAGACTGAAACAGAAGTGAGGCGTGTCTGAATTTTCTGAAACCACCATTTCACTTCTGACCCTGTGAACAAAACGATGCAGGAGTGAACCTGTCCCTCCTTTCCCGGGTGATGTCGTCGAGGCTCTCGCGCGGAACCTACAACGGCGGGCTCCTCTCGACGGAAGCCGGCACTTTGGCTCGCGTCGCGGCGGACATGACGATCACGGCGGCGGGTTACCTTGGCCAGAACAGCCTCCTGAATGTAACCCTGCTTCCGTCCTTCGTGATCTGCGTAGCTTCCATCGTCGCGACATTTTGCACCTATAACTCCCTGTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008808

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA008808&oldid=62360"