BGIOSGA008827

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Revision as of 03:21, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008827| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008827, complete gene.| tag = OJ1717_...")
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Gene Name

BGIOSGA008827

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008827, complete gene.

LocusTag

OJ1717_A09.9

Ensembl Transcript ID

BGIOSGA008827-TA

Ensembl Protein ID

BGIOSGA008827-PA

Length

5440

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:29835355..29840794

Sequence Coding Region

29835355..29835405,29835838..29835924,29836124..29836159,29836780..29836869,29837775..29839817
,29839955..29840101,29840187..29840599,29840695..29840794

Genome Context

<gbrowseImage1> name=IndicaChromosome02:29835355..29840794 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:29835355..29840794 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGGAGCTTTGAGGGGAGGAGCCCTGCAGCTAGAGGAGTCGAGCAGGCGCTTGTTGCTCTGAAGAAGGGTGCACATCTCCTGAAATGTGGGAAGAGAGGGAAGCCCAAGTTATGCCCATTCAGGCTATCTTCAGCTTATTTACTTAATGCACGGAACTTTGATGAAGAAGATGAGAAAATGCTCATGTGGTATTCCAAAGACAGGGAAAAGCGTTTGAACTTGAGCTCTGTCTCAAGTGTAGTTCTTGGACATAAGACAGTACACTCAATATATGGCAGTCCTAGGCTGATGCAGAAAAATGTTTTGCAAAGCAATCTGGATTTCTCAGAACCGTTCTTCTCTCCAAGGCAGAGGACATGGTCAGACCTAGACTACTACATGGAAAAGGTCACTCCCGATGTGGTTAATAGGGTAAAACACAGTTGCAGGGATATAAAAGTTGCTGACAAACTTAACGAGCAAATAATTACCCAACTGCCTAAACAAAAATCATCTGAGGGGTTACATGTTGCATATGGAGCAACTTCTCTGAAGGACATCTTTGTCTGGGGAGAAGTTCCTGGCAATGTTTTAGATCATGGAGATGTATCAAAAGCCAATGTTTCACTTCCAAGGTTATTAAACACGACACATATTATTGATGTGCAGAGCGTTGCTTGTGGAGAGAAACACGCAGCGATAGTTACTAAGCAGGGAGAGGTCTTCTCCTGGGGTGTGGATAATGGTGGGAGATTGGGGCACAAAGTGAGTGTCAGTGTATCAGATCCTAAAATTATCGAGTCTCTTGCCTCTACACGAGTGAAGGCTATTGCATTTGGAGCAAAGCACACCTGTGCAGTTTCAATTTCAGGAGAACTTTATGAATGGGGTGAAGGGACTCACTGCTTGGGTTTGTGGGGTGATCAGTATCAAAGAAGCCAATGGTTCCCACATAAATTGTTTGGTCCTTTGGATGGCATCTCAATCTTGAAGATTGCATGTGGTCATTGGCACACGGCTATCATATCCTCTGCTGGCCAGATCTTCACATATGGAGATGGAACCTTTGGTGTTCTTGGACATGGTGACACGCTGACCGTTGCTCGGCCCAAACAAGTGGAGTCCCTGAAAGGGGTACGAGCCAAGGCCATTGCGTGTGGACCATGGCACACAGCTGCTATTGTAGAAAGAATGGGCACTGTCAAGAGCAATGCTCCTAGTGGGAAGCTGTTCACATGGGGTGATGCGGATAGAGGGAAGCTGGGTCATGCTGACAAAAAGATGAAACTTGTACCAACTTGTGTTGAGCCACTCAATGATTTTGATTTTGCTCAGGTATCCTGTGCAAAAGCACAAACCATTGTGCTTACAATAACCGGTGTTGTTTTTACCATTGGAAGCAAGGAACACGGACGATTAGGGAACCCTCTGTCTGAGGACACATCTATTTGTTTAATTGAGGGGCCACTTAAGACAGAGTTTGTCAGAGAGATATCATCAGGCTCTTCACATATAGCAGTTTTGACAATGAATGGAAAGGTGTTTACATGGGGCAAAGGAACAGAAGGGCAACTTGGTTTAGGTGACTATGTTGACAGGAGCTACCCGACTCTGGTCGAGGCCTTGGAAGACAAGCAGGTGCATAGTATAGCTTGTGGTTTCAACTTCACTATGGCAATTTGTTTACATAGGCCACTCTCAAGCAAGGACCAATCTGTGTGCAGCAACTGCCAGCTAACATTTGGCTTTACGAGGAAGAAGCACAACTGTTACAACTGTGGTTCCATGTTCTGCAATTCCTGCAGCAATAACAAGGTTTCCAGAGCAGCTCTTGCACCAGATAGGAGCAAAAGGTACCGTGTTTGTGATGCATGTTTCAGTCAAATGCAGAAAGTTGAGGAGCATAGCAAATTAGATCCACAACAGAAGATCCAAAAGGATGAGGTATGTCCAATAGAAATAAGATCATATACGCCAAAATTGGCGCGCATATTCAAGGAAGCAAATGCAATTATGGAGAAAATGGCATCAGCACAAAGCCCCCATCAGAGAAGTCAGAATTTGGCTGTGCCAGATCATGTGAGGACATTAAGATGGGGCCTAGTAGAGTGCCCCAGTCAATTCAGATGTGTGAGAGAGAGCATTCCTTATTGTTCAACATTGAATAAACAGACAGTCTCTGGTTCTATTGTACGGGTAATGAATGAGACAATGGCACCTAAACCTGCCAGCTCTTTGCTCAAATCTGCTAATGATTCAAAAGCGGAATTAGACTTGATGGAAAATATATTATTGGAAGAAGTGAAACAGCTTCAAGAGCAGGTAACTACTCTTGCAAAACAGTGCCGCCAAAGGAGCCTGAAAGTTCAGCTGTACAAACGAAAAGTCGAGGAGACTTGGTTAATTGCCAAGGATGAGGCTGCGAAGTGCAAAGCTGCTAAAGACATAATTAAGGTTTTGATCGATCAGCATGATTTTTTATCAAAGAACCTTTTGGCTGGTGAGAAATTAGACAACTCCAGAATCATGCCTAGCCACATTGCCAGTGCAAAATCACTAAAAGCAGAATTACCAGACCCACCTGACAAAAATGTATTCACCAGCGAATTTCAACAGTCGAAGAGCAACAGAGATCACCACAACAGCAGGCAGGTGGATAGGGAATGCACACAACCTTCAATTGCTTCCATGGCGGATTACTCGGTTATGCATCAGAATTGCAGAAGAACTTCCAACGGCAGCACCAGATGCACCGAGGGAACAGATGCCACCACTGCTCCTACCGATTCCAACGGTGTGATCGAGCAGATCGAGCGCGGGGTTTACGCGACAGTGGTTACATCCCCCGGGGGGAAGAAGTGCATCAAGCGCATCCGGTTCAGTCGGAAGCACTTTGGAGAGGATCAGGCGCAGAAATGGTGGGAAGCCAATGAGAGCATGATTTTTGGAAAATACAGCAGCATGGAACAAACGGTGGGGTAA</cdnaseq>

Protein Sequence

<aaseq>MAGSFEGRSPAARGVEQALVALKKGAHLLKCGKRGKPKLCPFRLSSAYLLNARNFDEEDEKMLMWYSKDREKRLNLSSVSSVVLGHKTVHSIYGSPRLMQKNVLQSNLDFSEPFFSPRQRTWSDLDYYMEKVTPDVVNRVKHSCRDIKVADKLNEQIITQLPKQKSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLSSKDQSVCSNCQLTFGFTRKKHNCYNCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACFSQMQKVEEHSKLDPQQKIQKDEVCPIEIRSYTPKLARIFKEANAIMEKMASAQSPHQRSQNLAVPDHVRTLRWGLVECPSQFRCVRESIPYCSTLNKQTVSGSIVRVMNETMAPKPASSLLKSANDSKAELDLMENILLEEVKQLQEQVTTLAKQCRQRSLKVQLYKRKVEETWLIAKDEAAKCKAAKDIIKVLIDQHDFLSKNLLAGEKLDNSRIMPSHIASAKSLKAELPDPPDKNVFTSEFQQSKSNRDHHNSRQVDRECTQPSIASMADYSVMHQNCRRTSNGSTRCTEGTDATTAPTDSNGVIEQIERGVYATVVTSPGGKKCIKRIRFSRKHFGEDQAQKWWEANESMIFGKYSSMEQTVG</aaseq>

Gene Sequence

<dnaseqindica>1..51#484..570#770..805#1426..1515#2421..4463#4601..4747#4833..5245#5341..5440#ATGGCTGGGAGCTTTGAGGGGAGGAGCCCTGCAGCTAGAGGAGTCGAGCAGGTATGCAACATGAAGCGTTTTTCTTTTGCATCTTCTTTTAAAGCATTGTGGTATATTCATGCTTATGCCAATGATTCTTCTTTTGCTCTCCTACAATTCCAACAATGCATCTTTGCTAAGTTGGATGGATTTGCTCTTCTTGTTTGTCTTCAAGGAGCCAATAAACACTGCATTCTTATTGAGAAAGTATTAGACACCATTATTTCATTTTCAGGATATAGTAAGCTATATGCACGTCATTTTTTTTCCAAGATGTTGAGTGAGCATGACATTTGCTTCTGTGGCCGCCCAAAGTTCCAAATGCGCTTAATATAATGTCATTTCATTTTCTTGTCTGTATCCTTTTGGGGTTCACTTATAACAGAAGACATCAAACCTGAAAAGGACATCTTCCTCCATTACGCGATTTAATTTTCTGGTTCTTTCCTTCAGGCGCTTGTTGCTCTGAAGAAGGGTGCACATCTCCTGAAATGTGGGAAGAGAGGGAAGCCCAAGTTATGCCCATTCAGGCTATCTTCAGTGAGTAGCTTCGTTACTGTAATTATGCTTAGCAGCATGCTAAAGATCGATTTTATTCATTAACTTTCATGGATTACGCATGCAACCTAGTGACGACTAGAGACATGTAGCAAAACATATGTTCAGTGCCTATGAGATATTTATTTAGTTGTGTTAATCTGAATGTTCTGAACATTTAACATGAATGACTCCATTACAGGCTTATTTACTTAATGCACGGAACTTTGATGAAGAAGTATAATAACTATTCAGCCACTTGAATTAAACAAATAAAAATTAAGTCCGCATGAAGCTCATACCAAGTAAATTAACTGATGCTACGTAGTTTGTTTTGGCTTCCAAGTTCTTCACCATGTTCCGTTGAGCAGAGCCATGACCAGAACTCTTAGATGAATTCCGCCCAGTTATCCACTTCTCCTTCATCTATCTGCATATCAAGATCTCACGATGTTCCTCCGCAACCTTTCAAAGATGTTCCTTGTTTTCCCACCGCTGATAAACAGATGACATGTCACAATGAGATTAACATTTATGGCCATACATACAGCTACGTCAGTAGATTACTCCAAATCTAGCTCTCTGCACTCCCACCATCCATCCTTTATTCTGAAATTAGCAATTCAATTTCCGTAATGTAGAGAAGATTGTAACACTATGAACACAACAAGGTATGATGTTTGAATATTAAATATTCTAAAATTAGGTCTGCAATATCTACTTCTTCCCAGTTCCCATGGAACGTATCCAGTTCAGATAAGTAGATTGAGTAAACTGCACATTAACGTCTTATCTTTTTAAAACATTAGAATTCAAGATGCTGTGCCTCTAAATAACATTAACATGCTTCTTTTGCAGGATGAGAAAATGCTCATGTGGTATTCCAAAGACAGGGAAAAGCGTTTGAACTTGAGCTCTGTCTCAAGTGTAGTTCTTGGACATAAGACAGTATGTGGTTTTCATTTCTCAAGCACATTGCTATTCTTTGTCCATAGTACATCATTAAGGATAGAACACGTTCATTTTCTGAGGATTCTAGTATTTTACAGACAAAACTTTTACGTCTGCATTGGCCAGAAAAGGAATCCCACTCATTGTCAGTCTTCTACAAGAATGGTGAATGTTCACTTGACTTGGTATTTTTACTCACTAGGCCTGTTGTTTAGACTTTGTAAATTTTATCCTTCACATTATTACCTTCCGTAACATTTTTCTAAATCACATTTCGCAGATTTGCAAAGATAGGGATCAAGCTGAATGTTGGTATATAGGCCTAACAACCTTACTATCAGTTCCATGCAGTCCAGTACTTTTGATTGACTCAACAAGTAGCCGTCGGATAAACAGCTGTACTAATAGCCCTCCTAGCTATATTCAGCAAAGGAGTAGGCTATTTGCTGTGCATGACACAAGAAAGTTTAAACAGGTTCATTCTATAACTTGTGCATGCTGTGATTTCTATGTGATAATTTTGCAACTTACCACAACTACAAGTGTGTTTTGATTTTTCCTAAGTTATGCTAAGTAACACGATTTGATCCGTAGGCTCAGGAAATTGTAAATATGTAATATTTCAAATGATGGTCATGCTAGTTGTGTTGAAATATTATTCATTTCAACTAATTAGTTCTTATCCAAATATAACAATAATGATACAGCTAAATGACAACCACATTGACAGACTTTTGCATAAATGATAAGCGACACCTCTTTTTTTTTCTTGCAAATCATGAAACTAAGTAGAGCGATACGACCTACGATTGGTCATAAGTTGCCCTATGTTCTCAGTTACAAAGTGTGTTTCACCTTTTTAGTTGAAATGACATGTTTTTCTACATGATTTCTCCATCAAGGTACACTCAATATATGGCAGTCCTAGGCTGATGCAGAAAAATGTTTTGCAAAGCAATCTGGATTTCTCAGAACCGTTCTTCTCTCCAAGGCAGAGGACATGGTCAGACCTAGACTACTACATGGAAAAGGTCACTCCCGATGTGGTTAATAGGGTAAAACACAGTTGCAGGGATATAAAAGTTGCTGACAAACTTAACGAGCAAATAATTACCCAACTGCCTAAACAAAAATCATCTGAGGGGTTACATGTTGCATATGGAGCAACTTCTCTGAAGGACATCTTTGTCTGGGGAGAAGTTCCTGGCAATGTTTTAGATCATGGAGATGTATCAAAAGCCAATGTTTCACTTCCAAGGTTATTAAACACGACACATATTATTGATGTGCAGAGCGTTGCTTGTGGAGAGAAACACGCAGCGATAGTTACTAAGCAGGGAGAGGTCTTCTCCTGGGGTGTGGATAATGGTGGGAGATTGGGGCACAAAGTGAGTGTCAGTGTATCAGATCCTAAAATTATCGAGTCTCTTGCCTCTACACGAGTGAAGGCTATTGCATTTGGAGCAAAGCACACCTGTGCAGTTTCAATTTCAGGAGAACTTTATGAATGGGGTGAAGGGACTCACTGCTTGGGTTTGTGGGGTGATCAGTATCAAAGAAGCCAATGGTTCCCACATAAATTGTTTGGTCCTTTGGATGGCATCTCAATCTTGAAGATTGCATGTGGTCATTGGCACACGGCTATCATATCCTCTGCTGGCCAGATCTTCACATATGGAGATGGAACCTTTGGTGTTCTTGGACATGGTGACACGCTGACCGTTGCTCGGCCCAAACAAGTGGAGTCCCTGAAAGGGGTACGAGCCAAGGCCATTGCGTGTGGACCATGGCACACAGCTGCTATTGTAGAAAGAATGGGCACTGTCAAGAGCAATGCTCCTAGTGGGAAGCTGTTCACATGGGGTGATGCGGATAGAGGGAAGCTGGGTCATGCTGACAAAAAGATGAAACTTGTACCAACTTGTGTTGAGCCACTCAATGATTTTGATTTTGCTCAGGTATCCTGTGCAAAAGCACAAACCATTGTGCTTACAATAACCGGTGTTGTTTTTACCATTGGAAGCAAGGAACACGGACGATTAGGGAACCCTCTGTCTGAGGACACATCTATTTGTTTAATTGAGGGGCCACTTAAGACAGAGTTTGTCAGAGAGATATCATCAGGCTCTTCACATATAGCAGTTTTGACAATGAATGGAAAGGTGTTTACATGGGGCAAAGGAACAGAAGGGCAACTTGGTTTAGGTGACTATGTTGACAGGAGCTACCCGACTCTGGTCGAGGCCTTGGAAGACAAGCAGGTGCATAGTATAGCTTGTGGTTTCAACTTCACTATGGCAATTTGTTTACATAGGCCACTCTCAAGCAAGGACCAATCTGTGTGCAGCAACTGCCAGCTAACATTTGGCTTTACGAGGAAGAAGCACAACTGTTACAACTGTGGTTCCATGTTCTGCAATTCCTGCAGCAATAACAAGGTTTCCAGAGCAGCTCTTGCACCAGATAGGAGCAAAAGGTACCGTGTTTGTGATGCATGTTTCAGTCAAATGCAGAAAGTTGAGGAGCATAGCAAATTAGATCCACAACAGAAGATCCAAAAGGATGAGGTATGTCCAATAGAAATAAGATCATATACGCCAAAATTGGCGCGCATATTCAAGGAAGCAAATGCAATTATGGAGAAAATGGCATCAGCACAAAGCCCCCATCAGAGAAGTCAGAATTTGGCTGTGCCAGATCATGTGAGGACATTAAGATGGGGCCTAGTAGAGTGCCCCAGTCAATTCAGATGTGTGAGAGAGAGCATTCCTTATTGTTCAACATTGAATAAACAGACAGTCTCTGGTTCTATTGTACGGGTAATGAATGAGACAATGGCACCTAAACCTGCCAGCTCTTTGCTCAAATCTGCTAATGATTCAAAAGCGGAATTAGACTTGATGGAAAATATATTATTGGAAGAAGTGAAACAGCTTCAAGAGCAGGTAACTGACATACCATATTCTCTGTAATAAACATGTTTCGTGGATCTGTTTAAATTATTTGTTTTCACTGAATGTTTGTTCTGGTATGCAACGTATAATTTAGTGATAAAGATGGAAATTATGTTTTATATAAGCAGGTAACTACTCTTGCAAAACAGTGCCGCCAAAGGAGCCTGAAAGTTCAGCTGTACAAACGAAAAGTCGAGGAGACTTGGTTAATTGCCAAGGATGAGGCTGCGAAGTGCAAAGCTGCTAAAGACATAATTAAGGTTTTGATCGATCAGGTATAAAACCGATGACCTATCTCCATTTGACAGATTTACCGGCTTTATTTTCTAAATAAGTTGTGTGGGGTGCCCAATTGTGCAGCATGATTTTTTATCAAAGAACCTTTTGGCTGGTGAGAAATTAGACAACTCCAGAATCATGCCTAGCCACATTGCCAGTGCAAAATCACTAAAAGCAGAATTACCAGACCCACCTGACAAAAATGTATTCACCAGCGAATTTCAACAGTCGAAGAGCAACAGAGATCACCACAACAGCAGGCAGGTGGATAGGGAATGCACACAACCTTCAATTGCTTCCATGGCGGATTACTCGGTTATGCATCAGAATTGCAGAAGAACTTCCAACGGCAGCACCAGATGCACCGAGGGAACAGATGCCACCACTGCTCCTACCGATTCCAACGGTGTGATCGAGCAGATCGAGCGCGGGGTTTACGCGACAGTGGTTACATCCCCCGGGGGGAAGAAGTGCATCAAGCGCATCCGGTTCAGGTGAGATCCCCCAAGAACCTAGATTATAATCAATCAGTTGTCAACGATGGCATCATGTCTTACCTTTGCAATAACTAACTCTTTCAATCTCGCAGTCGGAAGCACTTTGGAGAGGATCAGGCGCAGAAATGGTGGGAAGCCAATGAGAGCATGATTTTTGGAAAATACAGCAGCATGGAACAAACGGTGGGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008827