BGIOSGA008848

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Revision as of 03:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008848| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008848, complete gene.| tag = OsI_085...")
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Gene Name

BGIOSGA008848

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008848, complete gene.

LocusTag

OsI_08545

Ensembl Transcript ID

BGIOSGA008848-TA

Ensembl Protein ID

BGIOSGA008848-PA

Length

5187

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30319170..30324356

Sequence Coding Region

30319170..30319226,30319886..30319969,30320104..30320127,30320253..30320327,30320939..30321013
,30321188..30321265,30321546..30321623,30321717..30321837,30321940..30322003
,30322358..30322511,30322585..30322920,30323004..30323123,30323288..30323777
,30324094..30324356

Genome Context

<gbrowseImage1> name=IndicaChromosome02:30319170..30324356 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:30319170..30324356 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGACCAGAACGGCGCCGCGGCCGTGAGCGAAGCGGAGGCCGCCCCTGTTCAGGTTGAAACTGGTGCTGAAAGTGGGGATGCTGAAAGTGAGCAGTACCAACCATTTTTCTCCATGTGCCAGCCGATTCGCTCTGTTAGCTATTCAAATTCCTGGGATATGAGCAACTTGGATTCGATGGATGATAAATACATGCTGAGTGCACCTTGGCCTGAAAATGAGCAGCCCCAGTCTGAGAATGACATGGATTTGTTAGATGGGGATACAAATATGCAGTCTGAACCCCTCAGCACAGAGCAGCCTAGCTCCAATGATGAAATAGATATCTGGGATGGGAAAACTAAGCAAGACTCATCATCCCTTCTTGACAGCAAGCTGTGCAACTCCGGCAGCGGCGCTGAACCTTGCAACATGGAGGGCCAACAATTTTCTTTGTCCTTTTCCCGCAACACTCAATCTCAATTGGTGGGATCTGGTCTTGGCAATATGGGGAACACATGCTTCCTAAACTCAATTCTTCAGTGTGTCACCCATACAGTCCCACTTTTTCTCAGGCTTCGTTCCACTGATCACTGTGCTCCATGCTCATATGATAAAGATGGTTTCTGTTCATTCTGTGCTCTTAAAGAACATATTGATGAATCAATCCGAAGACCAGGACAACAGGAGGATGCACATGAGTTCCTACGTTGTTTGCTGGACAACCTGGATAAGTGCACCACTGATCCCAAGCCAAAGGATAAGCCCTCATCTTTTGATGAAGAAAGTATTGTTAAGCAGGTTTTTGGAGGCCGACTAAAAAGCAAGTTGACTTGCTGTGAGTGTGGACACTGCTCGGAGACATATGAGCCCTTCTTGGATCTTAGCCTGGAGATTGATCAGGCTGATAACCTTATTGATGCCTTGGAATCTTTTACCAAGTTGGAGCGAATTGGGGATGCTGAGGACAAGCTGAACTGTGAACATTGTAATGCAAAAGTTTGTAAGAACAAGCAACTTATGCTTGATAGATCACCAGATGTCGTTGCCATTCATTTAAAGCGTTTCACCAGCCTTGATAGATCTGTTGAAAAGATTGACAAACATGTGGTGTACCCACTAGAACTTGATTTGAAGCCATTCCATTGTGATCCTGACATCAATAAGGAGCTGAAATATGATCTTTATGGCGTTGTTGAGCATTCTGGTTCACCTAGCTATGGCCATTATGTTTGTTCTGTTCGTTCTTCACCGAGCACTTGGCATCTAATGAATGACTCCCATGTTGATTTGATTAGTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTGGTGCATCTCCCGTTTCAGTATTGGAGAATATAGATGTGGATTGTCCAACATCCTCTGGTGAAGCAACCAACAGTTCTGGTGATAAATTAGAGAAAGATGAAACTAGTCAATGCAAAACATCTTTCCTTGAGGAGCCAGCTAAGGGATGCCCGATTGATGCTATCAACAAGGCTGACCTAAAAGATGAAATCGTGCCATGCATATCATCTCATCACGATTGTGTGGCTATTAGGTGTCCTGGTAGTGCTGCTGACATTACCAATTTGGACAGACCCTCAACTCCTTCGCCAAAACGCAAGCGTTTCTTCTCTGATGATAATGAGTTTAATGTGTTTGAGTTTGAGGACTTCGGTGACGAAGATGAGACCCCTCTGCTTGGAAACCTTAAATTCACATCAAAAGCTAAGAAGGCTAAGGTTGAATCAGCATCTAAATCGACGAAGGGCCCTTGCATAGATAAGAACGTAACACGATTAGTAAGGAGTATGCCGTCCACTCGGAGAAAAGGCATTGTGGACTGCTTGAGCCAACTCAATGCAGAGCAGGATTCTGGAAGCTGTCCTCGGAGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAG</cdnaseq>

Protein Sequence

<aaseq>MADQNGAAAVSEAEAAPVQVETGAESGDAESEQYQPFFSMCQPIRSVSYSNSWDMSNLDSMDDKYMLSAPWPENEQPQSENDMDLLDGDTNMQSEPLSTEQPSSNDEIDIWDGKTKQDSSSLLDSKLCNSGSGAEPCNMEGQQFSLSFSRNTQSQLVGSGLGNMGNTCFLNSILQCVTHTVPLFLRLRSTDHCAPCSYDKDGFCSFCALKEHIDESIRRPGQQEDAHEFLRCLLDNLDKCTTDPKPKDKPSSFDEESIVKQVFGGRLKSKLTCCECGHCSETYEPFLDLSLEIDQADNLIDALESFTKLERIGDAEDKLNCEHCNAKVCKNKQLMLDRSPDVVAIHLKRFTSLDRSVEKIDKHVVYPLELDLKPFHCDPDINKELKYDLYGVVEHSGSPSYGHYVCSVRSSPSTWHLMNDSHVDLISEASALNQEGYILFYIRQGKFQWFSSLLEQKDDLHPENTSGASPVSVLENIDVDCPTSSGEATNSSGDKLEKDETSQCKTSFLEEPAKGCPIDAINKADLKDEIVPCISSHHDCVAIRCPGSAADITNLDRPSTPSPKRKRFFSDDNEFNVFEFEDFGDEDETPLLGNLKFTSKAKKAKVESASKSTKGPCIDKNVTRLVRSMPSTRRKGIVDCLSQLNAEQDSGSCPRSHPLGKKKLGIPVPIKW</aaseq>

Gene Sequence

<dnaseqindica>1..57#717..800#935..958#1084..1158#1770..1844#2019..2096#2377..2454#2548..2668#2771..2834#3189..3342#3416..3751#3835..3954#4119..4608#4925..5187#ATGGCGGACCAGAACGGCGCCGCGGCCGTGAGCGAAGCGGAGGCCGCCCCTGTTCAGGTGAGATCCTCCGGTCTGCTTGCTTGTTTTTCTGCAGTTTCTGGGGGGAGGGGGGGGGGGGTGCTTGGGGTGGGGTTTCGTCTGGTACGGCCGTTGCCAGTGGTACCTTGCGTGGTAAGACTGGTCGCTGTTTTTTTTTTTTGGGTTTACTCAGAACGCGGTTTTAGTCGGCGGGCTGGCTTGTCGTGTGGCGATTACTTGTGTTTACTGCTCATTTTTGCAACTCAGGATGCGATCTTAGCCAAACGTGTTTGATTTAGATGGTTTTGGAGTTTTGTGGTGCGTTTCGATTGGGTTATTGCTGTGGTTCTACCCCAATATTAAGCAGGGTACATGGCATTCGTGTGCTGGGAATCTGGTAGCAGGTAGGAGTAGCGCCTCACCACCACTTTTTATTAGTACATAATTATTGGGCAACACTAGTGACATTCATTCATGGCTAGTAGGCGACAGAAATTGTGGTGACTATCATGCTGCTTTCCCATTTTGTTTGTGTGCAACGTTCCGCAGTGTAGTTCAACAAACTGAAACGATGGTAATTTCGACCTGCCTTTTACCTTCTGTTTTGTCCAATTTCTGCTAGTACTTGTTACAAAAGGAAATGGTCTGTAGTTTTGGATCATCGATACATGGCTTATTTCTGACAATTGAGTTCTTAGGTTGAAACTGGTGCTGAAAGTGGGGATGCTGAAAGTGAGCAGTACCAACCATTTTTCTCCATGTGCCAGCCGATTCGCTCTGTTGTAAGATGTTAACCTGACTTCCTTGTACAAATATTTGATTACATGTGTTATCATTTCTCTTTGAAACAACATTACATGCCTTTTTTGTGGCTGCTAATTTTTTAACTTTGTCGGTTTCCTGGTTTTGCCTGCAGAGCTATTCAAATTCCTGGGATATGGTTTGTGCCCCCACAATTAAGAGTAACGAACACAATGTATACTCTTATCTATTCTTTTTTGCGATTAGCTTCTTGTCGCTCTGCTTTTGGCATAGTTAATTTAATATGCTTCTTCTCATACGCAGAGCAACTTGGATTCGATGGATGATAAATACATGCTGAGTGCACCTTGGCCTGAAAATGAGCAGCCCCAGTCTGAGGTATTTGCTAACCTTTCTAAGAATATGATTGTCCCAGTCAGTCTGTTTGGGTTCCTTAATGCTGATTTTCACCAAGTACTGTTTATTAATTTTCACTCAGAGCATTTCTGATACAGTAGATAAGAAAGCAAGTTATGTTCATGTCCTTTAATAGGTAATGAACCCACTTTAGTGCAACATCTCATGGAAAATAACAATCAATGGTATGAAGCATAAGCCTTGGTGGTTTGTTTCCCTGATCATCCCTAGGGAACTACGTGCCTGTTGTATTTTGTGCTCCGTGCTCTTATGTTTCTTCATGAAAAATACAATTGGTACTCTAATTACTTAGTATTTTGCCATTTTACTATCTTAATTTGAAGACTTGCATGTAGGGCACCGTTTTGTTGTGTGATATCATGCAGCCCTAATTTTTTGGACTGCAGGAGTTCAATTGTTAGCTTAGACTATAAAAAGTTAATGTAATCTAATTTTTTAGATTAAAAGATTGGGTGCCCAAGTGATTTTTATGTTGCAGCTAGCTATGTATTACCATGACATCCCTATTTTAGTCTGTTGTATCTAAAAATTTGCTAATTTTGGCTGTTTTTTTTCTTGTTCCTTTTTTTCAGAATGACATGGATTTGTTAGATGGGGATACAAATATGCAGTCTGAACCCCTCAGCACAGAGCAGCCTAGCTCCAATGTAATTTTCTATCTATTTGATCTTCTCTGGCCCTTTGTAGGCATGTGACCCAGTTATATGTTTAATGGTGCACACAATAAGCCTTGAACTGAAATATCTTATCCAACTATTCTACATAAACTGTGATAACCAGGTGCCTAGAGCTCCCTAATATTATTGTTGGTGGTGCTGCAGGATGAAATAGATATCTGGGATGGGAAAACTAAGCAAGACTCATCATCCCTTCTTGACAGCAAGCTGTGCAACTCCGGCGTAAGTGGCTTCACAATCACACCTATTACCCCCTACAATAAAATGAATTGTTTTGGGGTTCGTGCAGTCAAACTTTGTAAATATTAGCTGCTAATGTGTCTCCAGCAGTATTTTAGAAACTATGCTTATACCATGGCTTAAAATTATATTATAAGTTTATAACCAAATTAACAGCCAAAGTTATGTTTTAGAGACTGTTATGTTCAAAACAGTTATGCTAATGCCATTATTTTAATCTTTCTTAAACTGAACAAATTGGATTGATAAAAATGTTTAACAGAGCGGCGCTGAACCTTGCAACATGGAGGGCCAACAATTTTCTTTGTCCTTTTCCCGCAACACTCAATCTCAATTGGTGGTATGTTTTATGCAATATCTTCAACCCTAAGACTTACGTATGCTAATGACATATTCAATAATTTTGTTATTTTTAAAATTTCTTCATATGCAGGGATCTGGTCTTGGCAATATGGGGAACACATGCTTCCTAAACTCAATTCTTCAGTGTGTCACCCATACAGTCCCACTTTTTCTCAGGCTTCGTTCCACTGATCACTGTGCTCCATGCTCATGTATGGATAGTTTCTGACAGTAATGTTTTGCTACCTGAAAAATGTGTTATCTCATTGCCATTTTTGTTTCATGATAAAAAAAAAACTGTTGGTCTCCTGCAGATGATAAAGATGGTTTCTGTTCATTCTGTGCTCTTAAAGAACATATTGATGAATCAATCCGAAGGTCTGGATCTGTTATAAGGCCAGTGAGGTTCAGAGATAATTTAAGGAGTATCCTTTGCTCTCGATTTTTCCTTGCAGTTTAATTTTACCACATTTGTGCACACATGCTCAGTAATATGACTTGCATTTTTGACAATCATTGGGTGTTTATGCCTGAAAATTTCAAGGTAACCCCTTATATGATTTCATAACTTCTATTTATATGCTTCCTCAGTTCTGTTTCAATTTCAATACATCTTAATATTCACTGAATATTGTGCTGAGATATATATCTTCTATTGTATCTGTCTCTGGTACTTCAAATTAGTGGTGGAGTTCCTTGACAAGATTACCCAGAATTATCATCAGATTTTAGACCAGGACAACAGGAGGATGCACATGAGTTCCTACGTTGTTTGCTGGACAACCTGGATAAGTGCACCACTGATCCCAAGCCAAAGGATAAGCCCTCATCTTTTGATGAAGAAAGTATTGTTAAGCAGGTTTTTGGAGGCCGACTAAAAAGCAAGGTATTTTACTTTGTCATCATGCTTGTTGTCTTGGCACTTAAAAGTTGCAACTGAATTCATTCTGTCTATCTAGTTGACTTGCTGTGAGTGTGGACACTGCTCGGAGACATATGAGCCCTTCTTGGATCTTAGCCTGGAGATTGATCAGGCTGATAACCTTATTGATGCCTTGGAATCTTTTACCAAGTTGGAGCGAATTGGGGATGCTGAGGACAAGCTGAACTGTGAACATTGTAATGCAAAAGTTTGTAAGAACAAGCAACTTATGCTTGATAGATCACCAGATGTCGTTGCCATTCATTTAAAGCGTTTCACCAGCCTTGATAGATCTGTTGAAAAGATTGACAAACATGTGGTGTACCCACTAGAACTTGATTTGAAGCCATTCCATTGTGATCCTGACATCAATGTGAGTTTTTCTACTATCTCTATTTTTAGCAATAGCTTTACCAAAGGCATGTTTTGATGTTTTACTTGTCCCACCTTATGCAGAAGGAGCTGAAATATGATCTTTATGGCGTTGTTGAGCATTCTGGTTCACCTAGCTATGGCCATTATGTTTGTTCTGTTCGTTCTTCACCGAGCACTTGGCATCTAATGAATGACTCCCATGTATGTGTCACAAGTTACTTGCTATTACTTTTTTTTTAAATTAAAAATACTACCAGGGCTTTGCCCAGTAGTTATATATATTAAGAGCAGGATGTGTACAGATACTTGCTATTGCTTTTAGGTTTATCATGGCATGAATCATTAACCTCTGCAAACCTTTGTAGGTTGATTTGATTAGTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTGGTGCATCTCCCGTTTCAGTATTGGAGAATATAGATGTGGATTGTCCAACATCCTCTGGTGAAGCAACCAACAGTTCTGGTGATAAATTAGAGAAAGATGAAACTAGTCAATGCAAAACATCTTTCCTTGAGGAGCCAGCTAAGGGATGCCCGATTGATGCTATCAACAAGGCTGACCTAAAAGATGAAATCGTGCCATGCATATCATCTCATCACGATTGTGTGGCTATTAGGTGTCCTGGTAGTGCTGCTGACATTACCAATTTGGACAGACCCTCAACTCCTTCGCCAAAACGCAAGCGTTTCTTCTCTGATGATAATGAGTTTAATGTGTTTGAGTTTGAGGACTTCGGTGACGGTAAGTCCTACATCTTGGTTCCATTTTCTTTTGTTACCAAGTTCTCTGCAGCGGAACAGAAGTTCTTACGCACTACCCTATAACTGCACACTGAATTATTGTCTAGTTATCATATCATTGGTGTACCACTAATAGAGAGATTTTAAATTCATTGATAGACATACTGTTGCTGTGCTCTGCCAATGCTGATTACATTAGTTTTTCTTTTCTGCTAATTTATCGGGTTCATTGTCTTACATGGTACTACTGTACATTGCTTTGCTGATTATCCTTTGAAAATTGACGAGGCTGACATTTCTGCTTGTGCCATTTGCAGAAGATGAGACCCCTCTGCTTGGAAACCTTAAATTCACATCAAAAGCTAAGAAGGCTAAGGTTGAATCAGCATCTAAATCGACGAAGGGCCCTTGCATAGATAAGAACGTAACACGATTAGTAAGGAGTATGCCGTCCACTCGGAGAAAAGGCATTGTGGACTGCTTGAGCCAACTCAATGCAGAGCAGGATTCTGGAAGCTGTCCTCGGAGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008848