BGIOSGA008890

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Revision as of 03:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008890| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008890, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA008890

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008890, complete gene.

LocusTag

OSJNBB0060O16.5-1

Ensembl Transcript ID

BGIOSGA008890-TA

Ensembl Protein ID

BGIOSGA008890-PA

Length

4687

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31052777..31057463

Sequence Coding Region

31052777..31053055,31053144..31053239,31054832..31054942,31055031..31055340,31055790..31055880
,31056021..31056330,31056514..31056662,31056959..31057463

Genome Context

<gbrowseImage1> name=IndicaChromosome02:31052777..31057463 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:31052777..31057463 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGCGCCTCCGGTCGCGGACGGCGGCGGCGGCGGCCGTCATTGCCGCGTCGGCGGCGTCGCTCGCCGACGTCGCCTACGCGGACAGCGGCTACTCCTTCTTCCGCCGCAGCTCCCCCCCGCCTCCACCTCCCGCCGCCGCCGCCGCCGCCTCTGCTTCGGAGGACTCTGGCACGGAGGTGGCCGTCGAGGTGGATTCCAGCGGGTTCGACCCCGAGAGCCTGGAGCGGGCGGCCAGGTTGCTGCGGAAGCTCAACTCGTCGAAATACGCGAAGCAGCTGTTTGAGCTGATGCGCATGCAGGAGAAGACCCGGCTTGCGGAGCTGGAGGCCGAGAAGGTTCAGTACATCATCCAACAACACCTCAGGGACATTGAGAGGCAACAGAAAGAAGGTGAAAAATTCAGAGAGAGTTTGCAGCAGCAAGCTCAAGCAGAGGCACAAAAGTTACGTTATGACGATGAATTAGCTAGGAAAAGAATGCAGACGGAGCGTGAAGCACAAAGGCGACAGGATGCAGAACTTGTGAAGATGCAAGAGGCAGCTGCCCTTAGGAAAGAAGAAGTTAGGCGTACCACAGAAAAGAAGATTTTAGAAAAAATGCTAGAGGATGAGAAAGAAAAGGCTCTCTTAAAGAAACAAAATATCCAAGCTAACGCTGAAGCAAAAGGTGAAGCCCTTACTCGTGAAGCAAAGGCTTTAGAAGACTACAACAGAAAGATGCTCCTGGAACGTATAAATGGCGACAAAGAGAAGTGGATTGCTGCAATAAATACTACTTTTTCACACATTGAAGGTGGGTTTAGGATGCTGTTGACTGACAGGAGTAAATTATTGATGGGTGTTGGAGGAGTTACTGCGCTCGCTGCTGGAATTTATACTACCAGGGAAGGAGCAAAAGTTACATGGGGTTACATTAATAGAATCTTGGGTCAACCTTCACTGATCCGTGAATCATCTATGCCAAAGTTTCCACTTTCAAGGTTTAAGGCTCTCAAATCTACTTCAGCATCTCTGTCAGGAGGTGCAGGCTTTGAGAATGTTATTCTTCATCCTTCACTGAAACGGAGGATTGAACATCTTGCACGAGCTACAGCAAATACAAAGTCGCACGATGCACCATTTCGCAACATGCTGTTCTATGGTCCCCCTGGAACTGGGAAAACATTAGTTGCTAGGGAGATGGCACGCAAATCTGGCTTGGATTATGCCATGATGACGGGAGGAGATGTTGCACCCTTAGGATCAGAAGCTGTTACCAAAATACATCAAATTTTTGACTGGGCTAAGAAGTCAAGGAAGGGCATGCTGCTTTTCATTGATGAGGCTGATGCGTTCTTGTGCGAGCGCAACAGCACCCACATGAGCGAAGCTCAGCGGAGTGCTCTCAATGCACTACTATTTCGAACTGGAGACCAGTCGAGGGATATTGTCCTTGTCCTTGCAACAAACCGACCTAGTGATCTTGATGCTGCTATTACGGACCGCATTGATGAAGTTATTGAGTTCCCTTTACCTGGGGAGGAGGAGAGGTTCCAGCTGCTCAGGTTATACTTAAACCACTATATGCTCAAGGAAGATGGCAAAAACTCGTTTTGGGACTCACTGCTGAAAAAGCAACGGCAGAAGATACAAGTTAAGGACATAAGTGATGATTTGCTCAGGGAGGCTGCCAGGAAGATCAATGGATTCTCTGGCAGAGAGATTGCGAAGCTTATGGCCAGTGTGCAAGCTGCTGTTTATGGCCGCCCTGACTGTGTGTTGGATCCCCAGTTGCTTATGGAGGTAGTTGAATACAAAGTGGCTGAGCATCATCAGCGCATCAAGCTTGCTTCTGAGACTTCAACTTGA</cdnaseq>

Protein Sequence

<aaseq>MWRLRSRTAAAAAVIAASAASLADVAYADSGYSFFRRSSPPPPPPAAAAAASASEDSGTEVAVEVDSSGFDPESLERAARLLRKLNSSKYAKQLFELMRMQEKTRLAELEAEKVQYIIQQHLRDIERQQKEGEKFRESLQQQAQAEAQKLRYDDELARKRMQTEREAQRRQDAELVKMQEAAALRKEEVRRTTEKKILEKMLEDEKEKALLKKQNIQANAEAKGEALTREAKALEDYNRKMLLERINGDKEKWIAAINTTFSHIEGGFRMLLTDRSKLLMGVGGVTALAAGIYTTREGAKVTWGYINRILGQPSLIRESSMPKFPLSRFKALKSTSASLSGGAGFENVILHPSLKRRIEHLARATANTKSHDAPFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPLGSEAVTKIHQIFDWAKKSRKGMLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPSDLDAAITDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQVKDISDDLLREAARKINGFSGREIAKLMASVQAAVYGRPDCVLDPQLLMEVVEYKVAEHHQRIKLASETST</aaseq>

Gene Sequence

<dnaseqindica>1..279#368..463#2056..2166#2255..2564#3014..3104#3245..3554#3738..3886#4183..4687#ATGTGGCGCCTCCGGTCGCGGACGGCGGCGGCGGCGGCCGTCATTGCCGCGTCGGCGGCGTCGCTCGCCGACGTCGCCTACGCGGACAGCGGCTACTCCTTCTTCCGCCGCAGCTCCCCCCCGCCTCCACCTCCCGCCGCCGCCGCCGCCGCCTCTGCTTCGGAGGACTCTGGCACGGAGGTGGCCGTCGAGGTGGATTCCAGCGGGTTCGACCCCGAGAGCCTGGAGCGGGCGGCCAGGTTGCTGCGGAAGCTCAACTCGTCGAAATACGCGAAGCAGGCAAGGTGTTTGTTGTTTTGACCTAATGCGGGGTTTGCCCCCACCTACTGACGCTTTCTGCCTCTCGTGTGGTTGGTTTGGCCTGCAGCTGTTTGAGCTGATGCGCATGCAGGAGAAGACCCGGCTTGCGGAGCTGGAGGCCGAGAAGGTTCAGTACATCATCCAACAACACCTCAGGGACATTGTGAGTGCCTTTTGCCCCTTCCTAGATGCAAATAATTCAATGTGGTATGCCAAACATGGCCAAAATGTCAGAAGATTGATTTCTCTGCAGTTCCAGTGATTGACTAACAGAAAAGTAGCAGTCAATTTCATCTAACTTGTTCTTGCTTTGAGTGCTGATGAGTCGTCAGCACCACGTTATCACCGTTAGTCTATTTGGTGAATCATACCTTTACTAGTGAGGCCATAAATATCTTGGGGCTTGAAGCTAGGATGAAAGATCAATTGTGGTTGTAGTTTGCTGTGGCATGATATTTGTTGGTTATGTCGCCCTTATTTTTCTCTTTTTTCAATAATCACTAGAAGATGACTCGTGCGTTGCAACGGGAAAAAAGTAAAAAAAATATTAAATAATAGATGATTAGGGTCTAATTTTCCTGATAACATGTTCTTCGCATAAAGTTTGTTGTCCAGCATCTCCAACTTTAAAAATTGGTCTAGTGACAATACAGGGTGAGATAAAACATTACTCATGAGGGAGTACTAAAGATACATATGAAAGGAGGCTGTGCTAAAGTGTGATTTTTTTATTTAAGAGGGCATGTATAGCGTAATTAAAGATGCAAATGAAGAAAAACAAAGAACCTGACTCCTAGGCATAGAGTTGCTTATATGCATGGTTGCACACCCTGTTATGATCATCTCTGAACGCTGTTAGTCAGTTTTATATGTAGCCATGTCCTCATGTAGTAATGTTCTGCCGCAATAATAGTAATAATAATAATAATCCCCAGATAAGAATTGAGTTTATGACTACTCCCATAGACCCCAAAAAAAAAAGGAAAAGGGAAAAGAAAGTATCGCTATGTCGATGAAATTAGCATTAAATTAAATTATGTTTGTGTGATGTAAAAAGAGAAAAAGAAAAGAAAAGGTCTTTAGATCAATAAGATATTAGTATTGAATGAAAAAAGCATGCTCTTTGACAGAGCTAGAAAAGCCAATTAATTGCCTGTATATGTGGAGTTGCTTCTATTCTGATTGACACTGTATTTTTCCCTTCCATTATACGACGCCGCCAGATCCACGCGGCCGCTGCTCGCCTCCTCGCATCCCTCGCATGACTTCAGGCCTGCACCTTTTTTTTTCTTTTATATTTTTCATTCACCAAGGCGCTCAAAGGGTCTAGACACCGAATACCCCATATATTGACTATTGCGTTTGTGTCTTTTCCCTCCTTAATCAATGGTCGTTTTTCACCAAACCATGTACCAACACGTTGAGGTTTATTTGCTGACGTGGCACATCCCAATTGCAGATTGGGTTTTATCTTTCACTCAGAGAGATAGGCTATGTGCACCCTAGTTATGCAGAGGCTTGGAGTGATCTTAGAGTGGCTATATCAATATTGATGTAATTATCTAAGATCACTAAAGCTTCCTTTATAAAAAGAAATAGAAACTGAAACAGTAAACATGCAAAACATTCAATTCTGCCTTGGCCCTTTTGAATGGCAAAGACATCCTATGAGATATCATGGCATAAAATGGAAAGCTTTAGATTGTTAGCAATCTACTCATGTTTATCCTCTGATGCTCGATATCTGGTCCACAGGAGAGGCAACAGAAAGAAGGTGAAAAATTCAGAGAGAGTTTGCAGCAGCAAGCTCAAGCAGAGGCACAAAAGTTACGTTATGACGATGAATTAGCTAGGAAAAGAATGCAGGTATTGACTCCCCCCTCTGTTTACCTTCTTTAATGGCAAATGGTGCTTTAACAGCACAGCATCATTTAATCAAGTTTTTTTTTTCCAGACGGAGCGTGAAGCACAAAGGCGACAGGATGCAGAACTTGTGAAGATGCAAGAGGCAGCTGCCCTTAGGAAAGAAGAAGTTAGGCGTACCACAGAAAAGAAGATTTTAGAAAAAATGCTAGAGGATGAGAAAGAAAAGGCTCTCTTAAAGAAACAAAATATCCAAGCTAACGCTGAAGCAAAAGGTGAAGCCCTTACTCGTGAAGCAAAGGCTTTAGAAGACTACAACAGAAAGATGCTCCTGGAACGTATAAATGGCGACAAAGAGAAGTGGATTGCTGCAATAAATACTACTTTTTCACACATTGAAGGTGTTTATTTTCCTGCTAGTGACAATCCTTACGAATTTAATCTTGAATTCCTTTTGGTTCTGCTACTATTGCTGGTTACTCATAGTAAATGTGTATGCCTTTTTTGATCAGTCATTATTGAAGTTCTTAGGTTTGTAATCTCCTTTTCCCTGTATTCTAGGAATTTTCTCAATTCGACAATATCATTGGCATTCTCACATAGATATTTCTCTGTTTTTAGTGGTTATGGTGTCCAGTAATTGTGTGGAAATGTCATCACGTGAAATCGCACCACCATATATTCATTGTTCATTTTATTATTATTTAAGTGAAACTATGGTCTCATGTCAAAATTAATAATATGTACTGTGTGACACATCTGTTCTTCATTTTCATGTAATTGTCATGGGAATGTTGATAACCGATACTTTATTTTTCATTCAAACTTATTTTCTAATGTGAACTTGTAGGTGGGTTTAGGATGCTGTTGACTGACAGGAGTAAATTATTGATGGGTGTTGGAGGAGTTACTGCGCTCGCTGCTGGAATTTATACTACCAGGTTTATCTGGATTTCATGCTGAATTTACTTTTGAAGTATGCATACACACAAAACCACTTCACGGCTTGACTTCATCTTTCCCTTGTCAGCAAAAATTGTTTGAGGCATGTCATGTTCTTATTTACTCTTTTGTACTTTAGGGAAGGAGCAAAAGTTACATGGGGTTACATTAATAGAATCTTGGGTCAACCTTCACTGATCCGTGAATCATCTATGCCAAAGTTTCCACTTTCAAGGTTTAAGGCTCTCAAATCTACTTCAGCATCTCTGTCAGGAGGTGCAGGCTTTGAGAATGTTATTCTTCATCCTTCACTGAAACGGAGGATTGAACATCTTGCACGAGCTACAGCAAATACAAAGTCGCACGATGCACCATTTCGCAACATGCTGTTCTATGGTCCCCCTGGAACTGGGAAAACATTAGTTGCTAGGGAGATGGCACGCAAATCTGTAAGTTTTCAATAGATCTAATTGGCTAATCTATTCTGCTCCATTCTTCGAGAAATATCAGGCTTATGGATCTTCTATAAAGAACCTTGTTTTCTGGATTTTTTTTAATACAAAAATATGTATCCGTCAACTTCAGTTATACAACAATTGTATAATCTTACCATTGCATCCTTTATGTGACAGGGCTTGGATTATGCCATGATGACGGGAGGAGATGTTGCACCCTTAGGATCAGAAGCTGTTACCAAAATACATCAAATTTTTGACTGGGCTAAGAAGTCAAGGAAGGGCATGCTGCTTTTCATTGATGAGGCTGATGCGTTCTTGTGCGAGTATGTTCACAACTTAATATTTAAGCATTTGTCTGACCACTGATTTTTTTTTTCACAGATAGTGATATGCATGTTAATGAGCTAATCCTGAGGATATTCCCAATTCTTAAGCTTGACTTGAACTAATTTTGAGCCTGACAGTACATCCAATCTCTTTGCAGCCACTGAATTCAAACAAATTAAAGCAAACTTCGTTAGAACCCAAAACAACAAATCTTTATCATAAATTTATTTTACCAAATGACCAAATTTCACATCTCTCCTTTAATCTCATGCTTTTCCTTGCACTTTACTAGGCGCAACAGCACCCACATGAGCGAAGCTCAGCGGAGTGCTCTCAATGCACTACTATTTCGAACTGGAGACCAGTCGAGGGATATTGTCCTTGTCCTTGCAACAAACCGACCTAGTGATCTTGATGCTGCTATTACGGACCGCATTGATGAAGTTATTGAGTTCCCTTTACCTGGGGAGGAGGAGAGGTTCCAGCTGCTCAGGTTATACTTAAACCACTATATGCTCAAGGAAGATGGCAAAAACTCGTTTTGGGACTCACTGCTGAAAAAGCAACGGCAGAAGATACAAGTTAAGGACATAAGTGATGATTTGCTCAGGGAGGCTGCCAGGAAGATCAATGGATTCTCTGGCAGAGAGATTGCGAAGCTTATGGCCAGTGTGCAAGCTGCTGTTTATGGCCGCCCTGACTGTGTGTTGGATCCCCAGTTGCTTATGGAGGTAGTTGAATACAAAGTGGCTGAGCATCATCAGCGCATCAAGCTTGCTTCTGAGACTTCAACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008890