BGIOSGA008894

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Revision as of 03:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008894| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008894, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA008894

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008894, complete gene.

LocusTag

OSJNBB0060O16.25-1

Ensembl Transcript ID

BGIOSGA008894-TA

Ensembl Protein ID

BGIOSGA008894-PA

Length

3947

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31129593..31133539

Sequence Coding Region

31129593..31129751,31130001..31130043,31130211..31130337,31130502..31130590,31130681..31130741
,31130831..31130898,31130986..31131114,31131907..31132013,31132097..31132444
,31133218..31133383,31133496..31133539

Genome Context

<gbrowseImage1> name=IndicaChromosome02:31129593..31133539 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:31129593..31133539 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCTCCTCCGGCCACGGCCTCCGCGCCCTCCCTGCGCCCGTCCGCGGCCAGCCCACGCGCCGCCGCCGCTCGGTCGGTCGCCGTCCCCTCAGGGCCTCGCACCGTCGTTCCGAGGCGAGACGGGGGCCGCTTCCTCGGCGTCCGTGCTGCCAAGGCTGTCAGTGGCGTGCAGAGTGGTACCGTGGTGGATGATGGAGTGCAAAGACCATGGAAGCTCAGCGATGCTCGGCTCGTTCTTGAGGATGGTTCAGTTTGGAAGGCCAAGTCTTTTGGTGCTTCAGGAACACAAGTTGGTGAAGTGGTATTTAATACATCTTTGACAGGGTATCAAGAGATTTTGACTGATCCAAGCTATGCTGGTCAATTTGTCCTCATGACCAACCCACATATTGGAAACACTGGTGTTAATCCTGATGATGAAGAATCGAATCGATGTTTCCTTGCTGGTCTGATCATAAGGAATCTAAGCATATGTACATCCAACTGGCGATGCACAGAAACACTTGAAGAGTATCTGATGAAGAGAAACATTATGGGAATATATGATGTGGACACACGCGCCATAACACGGAGATTACGAGAAGATGGTAGTCTAATTGGTGTCTTAAGTACTGATCAATCTCGGACCGATGATGAGTTGTTGGAAATGGCAAAAAATTGGAAAATTGTTGGTGTTGATTTGATTAGTGGTGTCACATGCGATGCTCCATATGAATGGTCAGACAAGACTGATTCAGAGTGGGAATTCAAGAAGGGTCAATCGACTGAAAGTTTTCATGTGGTCGCATACGATTTTGGAATCAAGCACAATATTTTGAGACGTTTGACGTCATATGGATGCAAGATAACTGTTGTTCCAGCCAATTGGCCTGCTTCTGAGGTACTTAACTTGAGGCCTGATGGTGTGTTTTTTAGCAATGGTCCTGGAGATCCAGCTGCAGTTCCATATGCTGTGAAGACAGTACAAGAAATAATAGGGAAGGTTCCTGTGTTTGGCATCTGTATGGGCCACCAATTGATTGGGCAAGCTCTTGGTGGGAAGACATTTAAAATGAAGTTTGGTCATCATGGAGGAAATCATCCTGTTTGTGACCTTCGAAGTGGACGTGTCGACATAAGTGCACAAAACCATAATTATGCTGTTGACCCAGAGTCACTTCCAGAAGGGGTGAAAGTAACACATATCAATCTCAACGATAATAGCTGTGCCGGCCTTCAGTACCCTAAGATGAAACTTTTGTCTCTTCAGTACCATCCAGAGTCCTCACCCGGGCCGCATGATTCTGACTTGGCTTTTGGTGAATTTATAGAGATGATGAAGAACAACAGATTGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAPPATASAPSLRPSAASPRAAAARSVAVPSGPRTVVPRRDGGRFLGVRAAKAVSGVQSGTVVDDGVQRPWKLSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNPDDEESNRCFLAGLIIRNLSICTSNWRCTETLEEYLMKRNIMGIYDVDTRAITRRLREDGSLIGVLSTDQSRTDDELLEMAKNWKIVGVDLISGVTCDAPYEWSDKTDSEWEFKKGQSTESFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVLNLRPDGVFFSNGPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALGGKTFKMKFGHHGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGVKVTHINLNDNSCAGLQYPKMKLLSLQYHPESSPGPHDSDLAFGEFIEMMKNNRL</aaseq>

Gene Sequence

<dnaseqindica>1..159#409..451#619..745#910..998#1089..1149#1239..1306#1394..1522#2315..2421#2505..2852#3626..3791#3904..3947#ATGGCGGCTCCTCCGGCCACGGCCTCCGCGCCCTCCCTGCGCCCGTCCGCGGCCAGCCCACGCGCCGCCGCCGCTCGGTCGGTCGCCGTCCCCTCAGGGCCTCGCACCGTCGTTCCGAGGCGAGACGGGGGCCGCTTCCTCGGCGTCCGTGCTGCCAAGGTGAGCGCGAGTGGATTGCTCCTGCTGCTTTAGCTTCGCCGGCGGGGCCTTGTTACCTACCTATCGTTTGGGAGGAGTGTACTGATTGGTATATCTGGCTTTTGTGCTTTCCCGTGAAGCCTTCGCCATAGTTTTAGTCCCGTTGTATTGCAAGACTGAATCCGTCATACACCATCAACAGCTTCGTCTGTCAATGGTTGTTTTATCCGCGCGAAAATTGAGTTGTTTTGTGTTGTCTTCCGTGTGCAGGCTGTCAGTGGCGTGCAGAGTGGTACCGTGGTGGATGATGGAGGTGAGTCAGGTTGCCTTTTCGCTAGCTGATTCGAATCGCTCTAGTTTTGCAGTCGCAGCGCGGAATATGTGCTCAGGGTTCTGCTACAGATTTGCGATTAGGCAATTGTGCTCCACAGTTAAGAAGATGATGAATACTGTTTCACCATTTTTGGATTCTTCGTGCAGTGCAAAGACCATGGAAGCTCAGCGATGCTCGGCTCGTTCTTGAGGATGGTTCAGTTTGGAAGGCCAAGTCTTTTGGTGCTTCAGGAACACAAGTTGGTGAAGTGGTATTTAATACATCTTTGACAGGGTAAATCAACTAACCGTTTGAGTGATGGCATTTGTTTCCTGTTGTGGTTGAGATGTGCTTATTGTTCTTCCTGATAGAGAAACAACTAACCTCATCAAATAGTTGAGACGCGCATACTGCTTATTGACAACAGGAAACAACTAACCTCATCAAATGGGCTGCAGGTATCAAGAGATTTTGACTGATCCAAGCTATGCTGGTCAATTTGTCCTCATGACCAACCCACATATTGGAAACACTGGTGTTAATCCTGGTCCGTATCTTTTCTATTAGTCAATAATCATGATATGATGCCATTTCCACAATAGCTTGTAAGTTTTAACAAATTAGAATGCTCATGCAGATGATGAAGAATCGAATCGATGTTTCCTTGCTGGTCTGATCATAAGGAATCTAAGCATATGGTAAACCATTTTTTCCTAGTATTGGTTGACATAATTGGAACTTTAAGAGAACCACCTAATGTTGTTAAATTGGTATTCTTTCTCTGTAGTACATCCAACTGGCGATGCACAGAAACACTTGAAGAGTATCTGATGAAGAGAAACATTATGGGAATATGTAAGTAGTGTCACCTGATACATTGCTCTCTATGTCCGACAAACAACAAAAGCAACAATAAACACCATCAATTTGCTTTATATGCAGATGATGTGGACACACGCGCCATAACACGGAGATTACGAGAAGATGGTAGTCTAATTGGTGTCTTAAGTACTGATCAATCTCGGACCGATGATGAGTTGTTGGAAATGGCAAAAAATTGGAAAATTGTTGGTATGCTATGCTCTCTTCAAGCAGTAATGTCCTTGAATAATTGTCTGTCTCCTTTAATAAATATAATTGCACTTTGCATGGTAGATTGTAACATGTTTCTCTTTACGCCAGGTTTAGCACATATTTCTATTTACACCAGGTGCATCGAAATAAGTTTCGCTTAACACCAGGATACATCATCAAACATATAGAAATTTCATGAAATCTAAATGAAACTTCATGAAACATGGTCTAAATTAAAAAAAAAACGTTTTGATAAGATTTGACAAGATTTCCCTTCAGTTATATGAAGCAACCTAGTGCAAAATGAAACTTATTCGATCTACTCTGGTTTAAAGTGAAAGTGTGTGCTAAACTCAGTGCAAAGTGATAATTCTACCTGGTGAACAGTGCAATTTACTCTTAAGTCTTAAAAAATAATTAATTACCTTGCAAACATGATAGTACTAGGCTTAATGAAATTAACGTGGACTATTTATTATTTAACCGCGTACTGGTTCAGGAATATTATTATGTTTTGCTGGTCAAGCAGATTGTTAACTCGATTGAAGTTTCATATGTTTATGACATGGACACATGGTTATGATGCTTGCTATCCTTCACTGATCTATTATAGTAACTATCTGGAGTATTTTTCATGTCCACTTTATGATGAATATTGTGTCACCAGCATTGACATGTAATGATATCATTTAGAATAGTGTATTGGCAAAATTGATTGCCTCCATCCATATTTAGACACTATTCAAGTTACTGGTTATAAAACAAGATCTGGTATTTCATGTTATGCAGGTGTTGATTTGATTAGTGGTGTCACATGCGATGCTCCATATGAATGGTCAGACAAGACTGATTCAGAGTGGGAATTCAAGAAGGGTCAATCGACTGAAAGTTTTCATGTCAGTGTTGGTTTGGTCCCTTTCTCTTTTTTGAAACACTTCAGATGAATCTCATATCTAAACATTAGCTTCCTTTTATTTAGGTGGTCGCATACGATTTTGGAATCAAGCACAATATTTTGAGACGTTTGACGTCATATGGATGCAAGATAACTGTTGTTCCAGCCAATTGGCCTGCTTCTGAGGTACTTAACTTGAGGCCTGATGGTGTGTTTTTTAGCAATGGTCCTGGAGATCCAGCTGCAGTTCCATATGCTGTGAAGACAGTACAAGAAATAATAGGGAAGGTTCCTGTGTTTGGCATCTGTATGGGCCACCAATTGATTGGGCAAGCTCTTGGTGGGAAGACATTTAAAATGAAGTTTGGTCATCATGGAGGAAATCATCCTGTTTGTGACCTTCGAAGTGGACGTGTCGACATAAGTGCACAAGTTTGTTCCTGACCTGACTTCTTGCTGTTTTGATACTGAATGCGATTCATGTTTTTTGACTCTCGAGGGAAATAGCCTTCCGTTTGAATTTCAGTACAATAAACTGTTTTGTCTAACTAGAGGTATAGAAACTTGTTGTAGGATTGCTGTTTTAAGTTTTTAAGTCTAGAAACCATTGATATCCATTATAGTTCTTTTCTGTTACGTATTGATTTATAGATCTATCCTATGTTATTTCCTGAAAAGCTTTCCGTATTACTGGTGTTGGGAGAGGTGCTGGACTTCTCTCTGTGACACTTCCTGATGAAAACTTGGAGCTTCTGAGAGTAATGAATTTGAACCTTTAGGCTGTTAGGTATATCCAATTTAATCAACTACTCCCTCCGTTTCACAATGTAAGTCATCCTAGCATTTCCCATATTCATATTGATGTTAATGAATCTAGTCACATATATTTATCTAGATTCATTAACATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGAAGTAGCAAGTCTATCCTTCTAGACTAAAATCATATACACCAAATCAGCTGAGAGTCAGGTAGTATTGTTTGTAACTCTGTATTATTAGAAGTTGTTTTTCCACCAAGAGAAATGTGGGCATCCTTGCTATTTTCCTTTTATTTAATTCATATTTCTGAGTCTTAGCTATTTTCCCCTTTGTTTTACTTGTCATACTTGCATTTACTACTGTGCAATCTGCAATTGTCTTACCGTATTTTTCTCTGCAGAACCATAATTATGCTGTTGACCCAGAGTCACTTCCAGAAGGGGTGAAAGTAACACATATCAATCTCAACGATAATAGCTGTGCCGGCCTTCAGTACCCTAAGATGAAACTTTTGTCTCTTCAGTACCATCCAGAGTCCTCACCCGGGCCGCATGATTCTGACTTGGGTACATTTCCTTGAACAATATAGTACTTCTAGAGAAAAGTGTTGTACCAACACAACTTGTGTTATCACTGTTAAGTGTTGATTTTACTAATCCTGTTTCTTGTGCTTTACAGCTTTTGGTGAATTTATAGAGATGATGAAGAACAACAGATTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008894