BGIOSGA008895

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Revision as of 03:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008895| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008895, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA008895

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008895, complete gene.

LocusTag

OSJNBB0060O16.26

Ensembl Transcript ID

BGIOSGA008895-TA

Ensembl Protein ID

BGIOSGA008895-PA

Length

4722

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31138094..31142815

Sequence Coding Region

31138094..31138412,31138732..31138846,31138945..31139140,31139312..31139425,31139590..31139763
,31140221..31140415,31140561..31140686,31140785..31140897,31141011..31141131
,31141257..31141517,31142606..31142815

Genome Context

<gbrowseImage1> name=IndicaChromosome02:31138094..31142815 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:31138094..31142815 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGATTCACCAAGGAGGCGTAATGGCCTTCTGCGGGACCAGGTCCAGTTGGTGAAAAGGAAGGACACAAATCGCTACGAAATCGTCCGCTTTCCTGATCCATTGTCATTTGAGAAAGGCTTCTTTGTTATGATCCGTGCCTGCCAGCTTCTGGTGCAGCACAATGAAGGGATGATTTTTGTTGGCGTTGCTGGACCCTCTGGGGCCGGGAAGACTGTGTTTACTGAGAAGGTGCTCAATTTCATGCCTGGTGTTGCTGTGATATCAATGGATAACTACAATGATGCAAGTCGCATAGTTGATGGCAATTTTGATGATCCACGCCTAACAGACTACGACACACTGTTGGAAAATATTCATGGTCTGAAGGAGGGAAGATCAGTTCAGGTTCCAATATATGATTTCAAGATGAGCTGCCGGACTGGATACAGAACAGTTGATGTTCCTAGCTCTAGGATTGTTATCATTGAAGGCATCTATGCATTGAGTGAAAAGTTACGATCTGTATTGGACCTACGTGTTTCTGTCACTGGTGGTGTTCATTTTGACCTGGTGAAGAGGGTCCTGAGGGACATACAGAGAGCTGGCCAGGAGCCTGAGGAAATAATTCATCAGATATCTGAAACGGTTTATCCGATGTATAAGGCTTTCATTGAGCCAGACTTGCAGACAGCACATATAAAAATAATCAACAAGTTCAACCCATTCTCAGGGTTCCAAAATCCTATGTACATTCTAAAGTCTCCACGAACTATAACACCTACTGACATCAAAGTTGCTCTTGGTGAAGATCATACAGAAAGCATTGAAGAAACTTATGATATATATTTGCTTCCTCCAGGCGAAGATCCAGAATCATGCCAATCTTATTTGAGAATGAGGAATAGGGAAGGGAAATATAATCTGATGTTTGAGGAGTGGGTGACCGATAATCCTTTTATCATATCACCAAGGATTACGTTTGAAGTCAGTGTTCGTCTTCTTGGAGGTTTGATGGCATTGGGATATACTATAGCAGCTATACTGAAGAGAAAGAGTCGTGTGTTTTCTGATGGCAAGGCAACTGTTAAAATTGATTGGTTGGAGCAACTTAACCGAAATTATATACAGGTGCAAGGAAGAGATAGAAATCATGTCAAATTTGTAGCGGAGAAGTTAGGTCTGGATGGCTCTTATATTCCACGCACATATATTGAACAAATTCAGCTGGAGAAACTGATAAACGATGTTATGTATGCATTACCAGAAGATCTCAAGACAAAGCTCAGCATTGATGATGAGCTGGTTTCAAGTCCAAAAGAGGCCCTTTCTCGGGTTTCTGCTGATAAGAGAAACAAACACCTGAAAAGTGGTCTATCTCATTCATATTCAACTCATGGAGATAAAAATATTGTGAAATTGAGTAAATTGACAGAAACCAACAGAAGGTTTGGAAGTGGGCGAGCCCCTGAACCTCCTGCAATTAATCAGGGTGCTATCACTCAGCTATCCGAACAGATTTCAACGTTGAATGAGAGGATGGACGAGTTCACCTCTCGAGTTGAAGAACTCAACTGTAAATTTGCAATAAAGAAATCATCGACCAGTCAGCAAAATTTAGCTCTTCCAAATGAAACTTGCAATGGTTCTGCACCTACAAATCTCTTCGTTTCTCATTTGGGCAATGGTACCCTGATACCTCATTCGTCATCATCGAACCAACTTTTGAAGGAGTCCCCCATTGTGGATGAGATTAATGCCATATCAAGAGGTCAGCGCCAAGTGATACATCAGCTTGACAATCTGACCAGCTTGCTTCATGAGCATTTGGCCTTGACCCGCCAAGGAAATGCAGTCCGCAGAAACGGGATCCTGGAAATGGACATGTCCATCTGCCCACTCATTGCCCTGACAATTGGCGGTTTCGGCTATTTGGTGTTCAAGAGCCTCAACCGGAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MADSPRRRNGLLRDQVQLVKRKDTNRYEIVRFPDPLSFEKGFFVMIRACQLLVQHNEGMIFVGVAGPSGAGKTVFTEKVLNFMPGVAVISMDNYNDASRIVDGNFDDPRLTDYDTLLENIHGLKEGRSVQVPIYDFKMSCRTGYRTVDVPSSRIVIIEGIYALSEKLRSVLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPMYILKSPRTITPTDIKVALGEDHTESIEETYDIYLLPPGEDPESCQSYLRMRNREGKYNLMFEEWVTDNPFIISPRITFEVSVRLLGGLMALGYTIAAILKRKSRVFSDGKATVKIDWLEQLNRNYIQVQGRDRNHVKFVAEKLGLDGSYIPRTYIEQIQLEKLINDVMYALPEDLKTKLSIDDELVSSPKEALSRVSADKRNKHLKSGLSHSYSTHGDKNIVKLSKLTETNRRFGSGRAPEPPAINQGAITQLSEQISTLNERMDEFTSRVEELNCKFAIKKSSTSQQNLALPNETCNGSAPTNLFVSHLGNGTLIPHSSSSNQLLKESPIVDEINAISRGQRQVIHQLDNLTSLLHEHLALTRQGNAVRRNGILEMDMSICPLIALTIGGFGYLVFKSLNRS</aaseq>

Gene Sequence

<dnaseqindica>1..319#639..753#852..1047#1219..1332#1497..1670#2128..2322#2468..2593#2692..2804#2918..3038#3164..3424#4513..4722#ATGGCTGATTCACCAAGGAGGCGTAATGGCCTTCTGCGGGACCAGGTCCAGTTGGTGAAAAGGAAGGACACAAATCGCTACGAAATCGTCCGCTTTCCTGATCCATTGTCATTTGAGAAAGGCTTCTTTGTTATGATCCGTGCCTGCCAGCTTCTGGTGCAGCACAATGAAGGGATGATTTTTGTTGGCGTTGCTGGACCCTCTGGGGCCGGGAAGACTGTGTTTACTGAGAAGGTGCTCAATTTCATGCCTGGTGTTGCTGTGATATCAATGGATAACTACAATGATGCAAGTCGCATAGTTGATGGCAATTTTGATGGTAACCCCTAAGTTCCAAGCACTTCGCATACTATCTTATCATCCCTTAATTTGGACAGAACTTCCTTTACATTTGAAAGATTTCCTTAATAAGCACAGAACAATACTTTGCATACATCTGAATGCATTATCTTATAGTTACTTCTTGCATCTGCATATGTATGCACTGATAATAGTATGATTGTTGTACGTGCCTTATGATATAATCAAAGTATTAGTGAGTTTGATTGCTTGGAGCTGCATTCAATTGGGAGCGGCAGTGGTGCTAACTAACTACTTAACTGAGTTAGTGATGTCTGATCTTTGTGACATTTGAACAGATCCACGCCTAACAGACTACGACACACTGTTGGAAAATATTCATGGTCTGAAGGAGGGAAGATCAGTTCAGGTTCCAATATATGATTTCAAGATGAGCTGCCGGACTGGATACAGGTAGTTTGTCCTTAAATAATAATTCCCAGTTTGTCACCTTTTAGTATTGTAAATATATGGTCATATGTCTTTATGTTATCTTTTCTTATGGCAAACAGAACAGTTGATGTTCCTAGCTCTAGGATTGTTATCATTGAAGGCATCTATGCATTGAGTGAAAAGTTACGATCTGTATTGGACCTACGTGTTTCTGTCACTGGTGGTGTTCATTTTGACCTGGTGAAGAGGGTCCTGAGGGACATACAGAGAGCTGGCCAGGAGCCTGAGGAAATAATTCATCAGATATCTGAAACGGTTGCTTCACCTTTTTGAACTTGACCCTATATATGCCTTTCCCCTATCTTTTGTTTCCACAAAAGATCTTAATACAAACCAAACATTCATTTCGCAATTTATATTTTGTATGTATAGTATCTTTTTCATCCATCTGTGTTGTTTAACAAGATGAACGATGGCATTTTTCAGGTTTATCCGATGTATAAGGCTTTCATTGAGCCAGACTTGCAGACAGCACATATAAAAATAATCAACAAGTTCAACCCATTCTCAGGGTTCCAAAATCCTATGTACATTCTAAAGGTAAGCACTCCTTATTTATGTTCCTTTTAGTGTCCATGTTTTGGCAAGATGGCTGATCATTGATCTCTTCACCAATAGCATAATTTTAATACTAATAAATACTAATAAATACTTGTCTTGTGGTTTATCTAGATGGCCTAACTTTTGGAAATGTACTCTTGCAGTCTCCACGAACTATAACACCTACTGACATCAAAGTTGCTCTTGGTGAAGATCATACAGAAAGCATTGAAGAAACTTATGATATATATTTGCTTCCTCCAGGCGAAGATCCAGAATCATGCCAATCTTATTTGAGAATGAGGAATAGGGAAGGGAAATATAATCTGATGTTTGAGGTATGCAATTTATTGCAATGGCTACATAAGTGCATATGTGTGATGGATATAGTTGGTTGTTTTGTTACAAGAATTACCTCTCTGGCCCATTATTTTATATCCACTTTGTTAGTTGTTCCCTAGTGCCATGCTCATAGGTTCCAGAAATATGCATCTTATTCCTACTAGAATATTTTCACAACAGTTGCACCTGTAGCTCATAAAACAAAAAAAATTAATTGCATAACGAGCATAGTAAGGGAAAGATCAGCTGAGTCTTAATTGTATTTGCATTCACTAGCAGCTTTGTAACTGCCGTGTTTTTGGCAATTTTGTCTGCTGACTTATGGTGTTCTCTACCACAGCAGTTAGCTACTTAGCTTAGATATATACTCCTTTGCTATACCTTATTATCATATCGTATTTGCAATAATTTTGAAATTTGTGTTCACTAACTTGTGTTATTGATAATTTGAAGGAGTGGGTGACCGATAATCCTTTTATCATATCACCAAGGATTACGTTTGAAGTCAGTGTTCGTCTTCTTGGAGGTTTGATGGCATTGGGATATACTATAGCAGCTATACTGAAGAGAAAGAGTCGTGTGTTTTCTGATGGCAAGGCAACTGTTAAAATTGATTGGTTGGAGCAACTTAACCGAAATTATATACAGGTAAGAACACTCTTGCTATTTGATTGCAGTTCTCTTTCAACATGATCTTTCTCTGTGCACATCTTGACTGATACTCTAGTTATTATTATTTGTATCTATCCACTTGTTAACAAGATGCATAAAATATTATGTTGCTTTTTCTTAGGTGCAAGGAAGAGATAGAAATCATGTCAAATTTGTAGCGGAGAAGTTAGGTCTGGATGGCTCTTATATTCCACGCACATATATTGAACAAATTCAGCTGGAGAAACTGATAAACGATGTTATGTATGTATTGATAATTATATATATACACACTTCTCACCTTATTACTAGAGCACTAGTTGTATTTCTTAGTTTTGGGGTGGTTTCAAATAAGTTTACATGCAGGCATTACCAGAAGATCTCAAGACAAAGCTCAGCATTGATGATGAGCTGGTTTCAAGTCCAAAAGAGGCCCTTTCTCGGGTTTCTGCTGATAAGAGAAACAAACACCTGAAAAGGTTTCTTCATGTCATCTCTGCTCAAAATTTATTTTTTTGTGAAATGCTATACTTTGTTGAAACCATGGAAACTGAATCAAGCTCGCTGATGTTACCTTGTGGATTCTGTGCAGTGGTCTATCTCATTCATATTCAACTCATGGAGATAAAAATATTGTGAAATTGAGTAAATTGACAGAAACCAACAGAAGGTTTGGAAGTGGGCGAGCCCCTGAACCTCCTGCAATTAATCAGGTGGTCATTCTAGAATACTTGTATTAGTTATAGCTACCATACTAATTAAAACATTTTTTTCTTGTGAAAAACTTGACATAGATAACACTGACTCAAAATTCCTCCTTGTTTGCTGCTGCTTGTAGGGTGCTATCACTCAGCTATCCGAACAGATTTCAACGTTGAATGAGAGGATGGACGAGTTCACCTCTCGAGTTGAAGAACTCAACTGTAAATTTGCAATAAAGAAATCATCGACCAGTCAGCAAAATTTAGCTCTTCCAAATGAAACTTGCAATGGTTCTGCACCTACAAATCTCTTCGTTTCTCATTTGGGCAATGGTACCCTGATACCTCATTCGTCATCATCGAACCAACTTTTGAAGGAGTCCCCCATTGTGGATGAGGTATTTGCCTTACTGTTATTATAATCTTATACATGAGGTGTTGTCCCCCCACTGTTCCACTTGGATTTGTGGGTTTGTTGAAATTAAGTCATACTTAAGGTAAAATTGCATCATCTGATAATATAATCTTCGCTAGTCTGTGTTACAGCCATGTGTTTAGTTGCATTCTCCCAAACCATTTCACCTTAATCATTGACTAAAACTATGGCTTGGTCATCTGCAGAAAGGCCAACAGTATTTTTTTTCAAAAGAATTTCTGATGCCAGAACCAGATTCGGTCATCAAACTTGAAATCTCACCAATAGATTGGTTATGATGGGTCCATTTTTTTGCTATTATTTTCGAGACACTTTTCAGATTTTGTTTGAAATTTAGATGTAGAATTGGAAACTTTGTACAAGTCACTGTATTAATTTAGTCAGTATTCAAATAAGTGAATTTAGACTGAAGTGAAAATTTAGTGGGCCATCAGCTACTGGTACTATTGTTTGAGAGGAGAAACAATAGATAGAGAATAGATTCATGGTGGTAGTCAGTTAGACTCACATGAAAATAGATAAACAGGGAAGTGTATGGAACTTAAGTTTATCTTCCAATCATATAGGAAGAAAATCAGCTTCTGTAGTTTATGCAGTGAAATAATGTATCCATAAAAAACAGTGGAGTTGTAACAGTTGATCTTGGCATGTTGCATCGGGCCTAGATTGCTAACTATACATACTTCTATGCTCCAAATTTTTTGGCTTCACAAAAATGTTGTGATGTGATTTGAACCATTTTTATTTGCTGACAGAAAGGCTGTGAAAGCTTTTTTTTCAGTGGCATGTTTTTTAAGATATTGTACTGTATAATGTCTCGAAGATTTTATATTCCCGATGTATTTAATTTATGTTACTTATGTCAAAATCATATTCCAAAAAAAAAACTCTGTGTTCTGATGAATTTGTTTTTTTCCTGTTAAAATCATATTTCAAAACAAAGAACACTTCATACATGATTGCTGACTACTACCTATTTTTCTAGATATGACTCATCTTTCTGTATGAATCTTGACATTTATTTTGGTGGACTTTCTGTTTCCTTCGCAGATTAATGCCATATCAAGAGGTCAGCGCCAAGTGATACATCAGCTTGACAATCTGACCAGCTTGCTTCATGAGCATTTGGCCTTGACCCGCCAAGGAAATGCAGTCCGCAGAAACGGGATCCTGGAAATGGACATGTCCATCTGCCCACTCATTGCCCTGACAATTGGCGGTTTCGGCTATTTGGTGTTCAAGAGCCTCAACCGGAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008895

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA008895&oldid=62447"