BGIOSGA008896

From RiceWiki
Revision as of 03:22, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008896| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008896, complete gene.| tag = OsI_086...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008896

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008896, complete gene.

LocusTag

OsI_08638

Ensembl Transcript ID

BGIOSGA008896-TA

Ensembl Protein ID

BGIOSGA008896-PA

Length

2239

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31144438..31146676

Sequence Coding Region

31144438..31144561,31144677..31144727,31144858..31144917,31145691..31145749,31145880..31145946
,31146478..31146549,31146639..31146676

Genome Context

<gbrowseImage1> name=IndicaChromosome02:31144438..31146676 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:31144438..31146676 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAAGGGCGACGTCGCCGTGGCCGTGCCCCCCTCCATCGCCGGCGCCTCCTCCTCCGGGGCCAAGAAGGGCAAGCGCTTCGAGATCAAAAAGTGGAACGCTGTCTCCCTCTGGGCCTGGGACATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGTTAGCTTTGGACGTGACATGGCCCTTGTAGAATATGTTGAATTTATCTTTCATAAAGAATTCATGTCTGGGTTTCCTAGTTCCTATGATTTGTCAAAGAGAATCACTGGAATGTGGGTTGGGGAGGGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGACCCGTCAAGTGTGCCCTCTAGACAACAGCGAGTGGGAGTTCCAGAAGTATGGTCACTAG</cdnaseq>

Protein Sequence

<aaseq>MDKGDVAVAVPPSIAGASSSGAKKGKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWVSFGRDMALVEYVEFIFHKEFMSGFPSSYDLSKRITGMWVGEGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH</aaseq>

Gene Sequence

<dnaseqindica>1..124#240..290#421..480#1254..1312#1443..1509#2041..2112#2202..2239#ATGGACAAGGGCGACGTCGCCGTGGCCGTGCCCCCCTCCATCGCCGGCGCCTCCTCCTCCGGGGCCAAGAAGGGCAAGCGCTTCGAGATCAAAAAGTGGAACGCTGTCTCCCTCTGGGCCTGGGGTAAGCGTCCGCGTCCGCGTCCGCCGATGGCGCCCGCGTCTCGCTTGTTGGCTTTCTCGTGTGCGATCTGATGCGATTCCGTCGCGGTTTTCTTCTTCTTCTTCTTCTCGTGCAGACATCGTCGTGGACAACTGCGCCATCTGCCGCAACCACATCATGGACCTCTGTGAGCACGCGCGCCGCTGGCCTTCCGCTCGCCCCCGCTCCGATCTGCTGTTCCTTTAGATTCTAGGGTTTCTTCTTAGCTTGTTGGTATGGCTTGTGATGACGCGGGTGCGCGTGCGTGTGTTGTGTAGGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGGTAACATTGCTTCTTCTTAATCTCCCGTTAATTCTAATTCTGTGCCGATGCAGCAGTAGATGTAAGTGCTGATTCAGCCATGAATTGCATGGTTTCAGTTAGCTGAAGCCGGTCTTGCCCTGTTTATTCTGAATTTAGTTTTGACTTTGATTTCATAGTTCGATTGAGTCAAATTAATCCATGTGTCAACCTGTTACTGTGCTCTCAGTACACGTCGCCTTGTGTTGTTTGTCATCGGTTTGCTCATTTGATAATGATTTATCAGAATCTGGGGATCGTGCTTTCCCAAGACTGGTTATATGCTGCTAGGAATGTTTTTCTCTCGAATTTCATAAAATCCTAACATCTGTTTTGCTATACGCTATTTTGAATCCTTCGTTCTGGAATTGAGGAATGCTTCTAGTTTTCATGCTCTGGAGTATTGGTGAATTGAGTTGTAGTTTAATGGATCCTGCATTATCTGCCGCCTCTATGTCATTTATTGGTACCAGAGCATGATTTTTAATATCGTGTATAATATCATTTGTTGCTGATCATGTGATTTGCAATACCATGTTATTATTAGTGATTCTGATAATTGCAAGTTCTTGTGATCTGGAGTAGTTTTGACTGGACATGTATCAAATGAGTGCAATGTGATTATCTTTTCTATTCTTTTATATGTACTGGTTATATTCATAGTTGGAAATTTGTACTATAATTATGCATAGTTTGCTATATTGGTTTGTCTCTTGGTTTTTTATCTAAGTCTATAATTATATAATATGTCACAGTTAGCTTTGGACGTGACATGGCCCTTGTAGAATATGTTGAATTTATCTTTCATAAAGAAGTATGTAGTTATGATAGGATAATTGAATGGCTACTGGCTAGGAGTACCTTCTTCTGGATTAACCATCTACTGTTCAATTATAATTATACCTTGAACTATGCACACATGAAACTCAAATATGATAATACAGTTCATGTCTGGGTTTCCTAGTTCCTATGATTTGTCAAAGAGAATCACTGGAATGTGGGTTGGGGAGGGTGGGTGAGTGTTCATGTTAGCTGTGTCAATTGATGGAAGTGAATTCTTGCATCTGGAACTAGTTGAAGTTAGTGGTGTATATTTTCATCAAAGGCTTTTAGCTACAATTGCTTTATATATTTGTATGAGATTCTTGTGTGTGGATCTTCCTTGGCTACCTGGCATGTTAATATGTTCTTCTTCTGCCCACAGTTTAATATACTTTGACTGATCTTATGTTTACAGCATGTTGTTGTTTAGGGATATGTACACTTGCACCTTCTGTGTGCCCTCTGGATTATATGTTCAAGTATTGTTTTGAATTAAACAATACTGACTTGCACAGTCAAATGCTATGTTCAATATATTTATAATACTGAAGTTTCTCTCCTGGGGGAGTATTATGGAACTTTGTTTTCTTTCCGTGTAACTGGATTCTTCTCGTCTTTTTGTGTTGCTTTTAGTGGATATTGCATTTTCGCAGTGAATTAAATCGAGCTGTGAAGTCAACTATCCATGTACTGATGAACAATCTATCTTTGTTGTGTCAGGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGACCCGTCAAGTGTGCCCTCTAGGTTGGTTGCCCTGGAAAATGCCACTTAATTGGTGTGGTTGTTACCTCTGCTCGTTCACCGTGCCTTACTTTTCTATTTTATCTATGCAGACAACAGCGAGTGGGAGTTCCAGAAGTATGGTCACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008896