BGIOSGA008908

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Revision as of 03:23, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008908| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008908, complete gene.| tag = OJ1311_...")
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Gene Name

BGIOSGA008908

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008908, complete gene.

LocusTag

OJ1311_H06.29

Ensembl Transcript ID

BGIOSGA008908-TA

Ensembl Protein ID

BGIOSGA008908-PA

Length

5306

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31334096..31339401

Sequence Coding Region

31334096..31334872,31335095..31335327,31336217..31336376,31336667..31336912,31337010..31337146
,31337392..31337725,31337801..31337962,31338235..31338309,31338384..31338484
,31338559..31338628,31338727..31338783,31338874..31338935,31339022..31339094
,31339180..31339401

Genome Context

<gbrowseImage1> name=IndicaChromosome02:31334096..31339401 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:31334096..31339401 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCCCCGCACATCGGGTCTCCTCCTCCTCCTCGCCGCGGTCGTCGCGGCCGCCGCCGTCGTCCTCGTCCCGCCGGCGGAGGCGGCGGTGGCGAGCATCGACCTGGGGTCGGAGTGGCTCAAGGTGGCCGCCGTGCACCTCGCCCCCGGACGCGTCCCGATCGCGGTGGCCATCAACGAGATGTCGAAGCGCAAGTCCCCGGCGCTCGCCGCGCTCGCCGACGGCAACCGGCTCGCCGGCGAGGAGGCGTCCGGCATCACCGCGCGCCACCCGTCCAAGGTGTTCGCCCGCGCGCGGGACCTCCTCGCGAAGCCCTTCCCCTACGTGCGGTCCGTCGCGGAGGCGCTCTTCCTCCCCTACGACCTCGTCCCCGACGCGCGCGGCGCCGCCGCGGTCCGCGCGGACGACGGGCAGGTCTACACCGTCGAGGAGATCGTCGCGATGGTGCTCCACTACGCCGCTGGGCTCGCGGATGCGCACGTCGGCGCTCCTGTGCGTGACGCCGTCGTCGCCGTTCCGCCCTACTTTGGGCAGGCCGAACGCCGGGCCTTGACGCAGGCGGCGCAGCTTGCCGGAGTTAACGTCCTCGCGCTCATCAATGAGCACGCCGGGGCAGCGTTGCAGTACGGGATCGACAAGGATTTCTCGAACGAGTCGAGGCATGTTATCTTCTATGACATGGGCGCAGGTAGTACCTACGCCGCGCTGGTGTACTACTCAGCTTACAAGGCCAAGGAGTTTGGGAAGACGGTATCGGTGAACCAGTTCCAGGTTAAGGATGTTAGATGGGACTCCAAACTTGGAGGCCTTGAAATGGAAATGCGCCTGGTAAACTATTTTGCTGATCAATTTAATAAACAACTCGGTAATGGAGTTGATATCCGCCAGTCTCCCAAGGCGATGGCTAAGTTGAAGAAGCAAGTTAAGCGTACCAAAGAAATTCTGAGTGCAAATACTGCTGCTCCAATTTCAGTTGAATCACTATATAATGATCTCGATTTCAGGAGTACCATTACACGTGAAAAATTTGAAGAACTTTGTGAAGATTTATGGGAGCAGGCTCTAACTCCAGTTAAAGAAGTGCTTGCACATTCTGGAATGAAGATTGATGATATCTATGCTGTAGAATTAATAGGAGGAGCTACTCGAGTACCAAAATTGCAGGCTAAGCTGCAGGAATTCCTGGGAAGAAGTGACCTGGATAAGCATCTTGATGCAGATGAAGCAATTGTTCTGGGTGCCTCACTGCATGCAGCTAACTTAAGTGATGGAATTAAGTTGAACCGTAAGTTAGGGATGATTGATGGTTCTACTTATGGTTTTGTGTTTGAAATAAATGGCCCAGATTATGTCAAAGATGAAAGCACTGATCAATTACTGGTGCCAAGGATGAAAAAATTGGGAATTAAGATGTTCAGGTCCATTAGACATACTAAAGACTTCGATGTTTCTATCAGCTATGAAAAAGCTTCTGAACTGCCTCCAGGTGTTACATCACACAAATTTGTGGAGTATTCTGTATCAGGCCTGACAGATGCAAGCGAAAAGTACAGTAGCCACAATTTATCTGCACCCATCAAGGCAAATCTACATTTTTCTTTGAGTAGGAGCGGAATTATTTCTCTTGATAGGGCAGAAGCAGTGATTGAGATAACTGAATGGGTTGAAGTTCCAAAGAAGAATTTAACTCTAGAGAGTAATTCCACCAGTCAGACTTTGTCTTCGGAAGGAGGAGCAGCTAATGACACATCTGACAGTAAGGAGAATGTGAGTTCTGATGGGGATGCAAATAAGTCCAGTGCTCCAATAGATGAGAGTAATGCACAAGCTATTGTTACAGAGAAGGTGCTCAAGAAAAGAACATTCAGGGTCCCGTTAAAGGTTGTGGAAAAGATGGCTGGTGCTGGATCAATTCTTTCGAAGGAGTTGTATTCTGAAGCAAAAACTAGGTTAGAGGCGCTTGATAAGAAGGATGCTGAAAGGAGGAGAACTGCTGAACTGAAAAATAACCTGGAGTCTTACATATACTCTATGAAGGAGAAGCTGGAAGAGAATACAGAAATTTTGACCGTCTCAACTGAACAGGAGAGGGAATCTTTTGCAGAGAAACTTAATGAGGTACAAGATTGGTTGTATATGGATGGTGAAGATGCTCAAGCAAATGAATTCAAGGAACGCCTTGACCAACTTAAGGCCATCGGTGACCCAATTCTTTTCAGATTGAGTGAGCTAAAAGCCCGACCAGCGGCTTGTGAAAATGCTAGATTGTATCTTGCTGAGTTGCAAAAGATTGTTAAGAACTGGGACTCGAACAAACCGTGGCTTCCAAAAAAGAGGGTAGATGAGGTTGTAAGTGAAGCAGAGAAAGTAAAAACTTGGTTGGAGGAGAAGGAAGCCATACAGAAAAGCACCTCTGTCTACAGTCCACCTGCTTTCACATCTGAAGAAGTCTACGAAAAAGTTCTGGACCTACAAGATAAGGTTTCTAGTGTCAATAGGATACCTAAACCAAAACCCAAGATAGAAAAGAAACCTCCCAAGGAAGAAGAGTCTGCTAACAAAGAGAAAACTGACTCTTCGGAATCTGAATCCAAAGAAGCTGAATCCACGGAAACATCGTCGGAATCAGCTGCCCCTGAAGAGAGTCAGTCTGAACCACAAAAGACTGACGATTTAGAACCTGAAGCTCATGATGAGTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MAPPRTSGLLLLLAAVVAAAAVVLVPPAEAAVASIDLGSEWLKVAAVHLAPGRVPIAVAINEMSKRKSPALAALADGNRLAGEEASGITARHPSKVFARARDLLAKPFPYVRSVAEALFLPYDLVPDARGAAAVRADDGQVYTVEEIVAMVLHYAAGLADAHVGAPVRDAVVAVPPYFGQAERRALTQAAQLAGVNVLALINEHAGAALQYGIDKDFSNESRHVIFYDMGAGSTYAALVYYSAYKAKEFGKTVSVNQFQVKDVRWDSKLGGLEMEMRLVNYFADQFNKQLGNGVDIRQSPKAMAKLKKQVKRTKEILSANTAAPISVESLYNDLDFRSTITREKFEELCEDLWEQALTPVKEVLAHSGMKIDDIYAVELIGGATRVPKLQAKLQEFLGRSDLDKHLDADEAIVLGASLHAANLSDGIKLNRKLGMIDGSTYGFVFEINGPDYVKDESTDQLLVPRMKKLGIKMFRSIRHTKDFDVSISYEKASELPPGVTSHKFVEYSVSGLTDASEKYSSHNLSAPIKANLHFSLSRSGIISLDRAEAVIEITEWVEVPKKNLTLESNSTSQTLSSEGGAANDTSDSKENVSSDGDANKSSAPIDESNAQAIVTEKVLKKRTFRVPLKVVEKMAGAGSILSKELYSEAKTRLEALDKKDAERRRTAELKNNLESYIYSMKEKLEENTEILTVSTEQERESFAEKLNEVQDWLYMDGEDAQANEFKERLDQLKAIGDPILFRLSELKARPAACENARLYLAELQKIVKNWDSNKPWLPKKRVDEVVSEAEKVKTWLEEKEAIQKSTSVYSPPAFTSEEVYEKVLDLQDKVSSVNRIPKPKPKIEKKPPKEEESANKEKTDSSESESKEAESTETSSESAAPEESQSEPQKTDDLEPEAHDEL</aaseq>

Gene Sequence

<dnaseqindica>1..777#1000..1232#2122..2281#2572..2817#2915..3051#3297..3630#3706..3867#4140..4214#4289..4389#4464..4533#4632..4688#4779..4840#4927..4999#5085..5306#ATGGCGCCGCCCCGCACATCGGGTCTCCTCCTCCTCCTCGCCGCGGTCGTCGCGGCCGCCGCCGTCGTCCTCGTCCCGCCGGCGGAGGCGGCGGTGGCGAGCATCGACCTGGGGTCGGAGTGGCTCAAGGTGGCCGCCGTGCACCTCGCCCCCGGACGCGTCCCGATCGCGGTGGCCATCAACGAGATGTCGAAGCGCAAGTCCCCGGCGCTCGCCGCGCTCGCCGACGGCAACCGGCTCGCCGGCGAGGAGGCGTCCGGCATCACCGCGCGCCACCCGTCCAAGGTGTTCGCCCGCGCGCGGGACCTCCTCGCGAAGCCCTTCCCCTACGTGCGGTCCGTCGCGGAGGCGCTCTTCCTCCCCTACGACCTCGTCCCCGACGCGCGCGGCGCCGCCGCGGTCCGCGCGGACGACGGGCAGGTCTACACCGTCGAGGAGATCGTCGCGATGGTGCTCCACTACGCCGCTGGGCTCGCGGATGCGCACGTCGGCGCTCCTGTGCGTGACGCCGTCGTCGCCGTTCCGCCCTACTTTGGGCAGGCCGAACGCCGGGCCTTGACGCAGGCGGCGCAGCTTGCCGGAGTTAACGTCCTCGCGCTCATCAATGAGCACGCCGGGGCAGCGTTGCAGTACGGGATCGACAAGGATTTCTCGAACGAGTCGAGGCATGTTATCTTCTATGACATGGGCGCAGGTAGTACCTACGCCGCGCTGGTGTACTACTCAGCTTACAAGGCCAAGGAGTTTGGGAAGACGGTATCGGTGAACCAGTTCCAGGTACAATTCGATCTTGCCCAAGGTCTTTTAGTTGTTCAATTTTGTCCGTCGTATGCTTACTCAAAAGTCCACTGAAAACCCCTTTTTTTACATCATCTTTCACATGCCTAAGCGATGGAAGATCTGACAAATATATGAAAAATTGAGCTTGCTAAATGCCTACATTACAGAGATACAGAATGCCAGAATCTATTACTAATTTCTTCAGCTAATTATCTACAGGTTAAGGATGTTAGATGGGACTCCAAACTTGGAGGCCTTGAAATGGAAATGCGCCTGGTAAACTATTTTGCTGATCAATTTAATAAACAACTCGGTAATGGAGTTGATATCCGCCAGTCTCCCAAGGCGATGGCTAAGTTGAAGAAGCAAGTTAAGCGTACCAAAGAAATTCTGAGTGCAAATACTGCTGCTCCAATTTCAGTTGAATCACTATATAATGATCTCGATTTCAGGTGCGTCCTCACCACTTGCATAATCTTCACACATGTAATATGGACCGATATTTATAAATTCATAAATGGAAATTTACTTAACATTTTTGGATTCTCTGTTCAAGCCTTCAAGATAACGCTCTCGAGTTTAATTGGTTATGAACAATTGAAACTTTGTTGAAAATTAGAGATGCTTGTCAGCCTGGCAAATTCTTGCATAGCAACTTACTATGCTGGAGTAGCATGCATGCTAGGTGGCAGGTGCTTTGTCTCTGATCTACTAAAATGACCTGACCGGTGTTTCAATTAAATCAATCACCTTGTTATCTTTGAATTAATGAATGCAATTCCATTAGAACAAATTCGTTAAGAGCTACAAAGGTTGTTTACTGTGGCCTGAAGTGTAGCTACTCCATTGATGTTCTGCATTGGCCTTTGTTGCATATCCATTGATTGTACGGAACGTCGGAACCTGGAAGATAGTGAAACACACTGGCTTCTTAATCTATACAGTAGTTGCCAATATTAATACTTTGCATATCCATTGATTGTACAGAACATCGGAACCTGGAAGATAGTGAAACACACTGGCTTCTTAATCTATACAGTAGGTACCAATATTAATACTTTGCATATCCATTGATTGCACGGAACATCGGAACCTGGAAGATAGTGAAACACACTGGCTTCTTAATCTATACAGTAGTTGCCAATATTAATACTTTGCAAGCATAGTCGACCCTTCTTCCTTACTGTATTGTTCTATAATGGTTGATGTTCTGCCTTCCTTTCATCTTTTCTTGATTTCTTTCTGTACAAAGTAAACTTTTTCTAGTTTTAAATCATGATCAGGAGTCAGGACAATTTTCTAGGTTCTACTTGTTGAATTAATGGTCGCTTCTTGTTACAGGAGTACCATTACACGTGAAAAATTTGAAGAACTTTGTGAAGATTTATGGGAGCAGGCTCTAACTCCAGTTAAAGAAGTGCTTGCACATTCTGGAATGAAGATTGATGATATCTATGCTGTAGAATTAATAGGAGGAGCTACTCGAGTACCAAAATTGCAGGTGATTAAACTGAACTCGTTTTTATGTTTGACCTTGTATTGTGGGGCTCTAATGGCATTCAGGCACATGACTGCCATGTTTTTATTTCTCTCGTCACTTGATTCTCATCATAAGTTTAATACAATCCATTACTTTTAGTTAACATCTTAAAAATTTGCTATCATATCTCAAAGGCATTTGTTAACCACTGTAACCTACTATGCAGATGACTTAACTGTACTTCTGAAACAGTTGTGCTTCCATCATTCACCTTGTTATTTTTGTAATAAAATTCCATTCTCCTGGTACAGGCTAAGCTGCAGGAATTCCTGGGAAGAAGTGACCTGGATAAGCATCTTGATGCAGATGAAGCAATTGTTCTGGGTGCCTCACTGCATGCAGCTAACTTAAGTGATGGAATTAAGTTGAACCGTAAGTTAGGGATGATTGATGGTTCTACTTATGGTTTTGTGTTTGAAATAAATGGCCCAGATTATGTCAAAGATGAAAGCACTGATCAATTACTGGTGCCAAGGATGAAAAAATTGGGAATTAAGGTTATAATGCACCTTTCTTGTTTCCTTTTGATTATATGCAAAAAAAAAGTTTTTTTTTAAAAAATAATCTAGCTTGCAATTGTTTTGTTGTCTACAGATGTTCAGGTCCATTAGACATACTAAAGACTTCGATGTTTCTATCAGCTATGAAAAAGCTTCTGAACTGCCTCCAGGTGTTACATCACACAAATTTGTGGAGTATTCTGTATCAGGCCTGACAGATGCAAGCGAAAAGTAAGCATGCATAATGCATATCATCTTATGTACTTTTTTTTGTGTCATGGTACTGCTTATAACAAGCTGAACATAGAGTACCTTTATTTCAACTGCTATTTTTTTGGGGGCGGAACATTCCATCTTCGAGGCTGCAGTACATATGTTTATTCTATTTCTAATAATATCTCAACACCATTGCCATTGGCAATTTGTATGTGTTTAATTTCACTGCATGAATTTAACCATGTGGTTATTTCAAACAGGTACAGTAGCCACAATTTATCTGCACCCATCAAGGCAAATCTACATTTTTCTTTGAGTAGGAGCGGAATTATTTCTCTTGATAGGGCAGAAGCAGTGATTGAGATAACTGAATGGGTTGAAGTTCCAAAGAAGAATTTAACTCTAGAGAGTAATTCCACCAGTCAGACTTTGTCTTCGGAAGGAGGAGCAGCTAATGACACATCTGACAGTAAGGAGAATGTGAGTTCTGATGGGGATGCAAATAAGTCCAGTGCTCCAATAGATGAGAGTAATGCACAAGCTATTGTTACAGAGAAGGTGCTCAAGAAAAGAACATTCAGGGTCCCGTTAAAGGTAAAGATAGAAGGTCATAAATCTGGTGTTAATATTGACAGAACATGACTTAATAAATATATTGTCCAATGGCAGGTTGTGGAAAAGATGGCTGGTGCTGGATCAATTCTTTCGAAGGAGTTGTATTCTGAAGCAAAAACTAGGTTAGAGGCGCTTGATAAGAAGGATGCTGAAAGGAGGAGAACTGCTGAACTGAAAAATAACCTGGAGTCTTACATATACTCTATGAAGGAGAAGGTACCTTCTGTTCTCTTCTACCTTCAGTGTTAATAGCATAAAACATGTTACTGCCATTCACATGACCCCTCTTGTTTCTTGATACATCTGAAATCTTTGAGGGTATTATATTCCTCAGAACTTCAGCTTTGCACTGATAATAGGAACTCCATTGTCTACATAAATCTAGAAAAACACAGAAAAGTTTCGTAACGTTTAGCACAGTTATTATTTACTAGGTGCTATACTTATGTTTGTTGACTACTTGTTTTCTGTTATTTGGCACATCACAGCTGGAAGAGAATACAGAAATTTTGACCGTCTCAACTGAACAGGAGAGGGAATCTTTTGCAGAGAAACTTAATGAGGTCTGTTCAATAATAATCTTCTGGTGGGTTTCATTTGTCTGTTGAATCCTCATGCTGAGATTGTTTAAGTGCAGGTACAAGATTGGTTGTATATGGATGGTGAAGATGCTCAAGCAAATGAATTCAAGGAACGCCTTGACCAACTTAAGGCCATCGGTGACCCAATTCTTTTCAGGTAACTTGCTCTGTATCCACTTAGGTTCATATAGGTCATTGACTGACATTGATTTTTTTTTCTTTATTGCCCAGATTGAGTGAGCTAAAAGCCCGACCAGCGGCTTGTGAAAATGCTAGATTGTATCTTGCTGAGTTGCAAAAGGTATCTATACAGAAGACCAAACAATGTTTTTGTTGCTGCTCAACTTCATGATTGTTGTGCTACTCTATTCTCATCTGTAACACTTTCTGGTCTTGCAGATTGTTAAGAACTGGGACTCGAACAAACCGTGGCTTCCAAAAAAGAGGGTAGATGAGGTAAACCAGTGAGCTTAATGAAGTTCGATAAATTCATTCTGGTTATGATGTGATTCTCATTTTATTGGTTGTGATGCTATCTGGGTCTAGGTTGTAAGTGAAGCAGAGAAAGTAAAAACTTGGTTGGAGGAGAAGGAAGCCATACAGAAAAGGTATGCTGAGTCTAGAGCCAACACAATTTCGCGAGTTCTACATTTAAATGTGTATATGTGTCTAACTCCCATTTATCATATTGCAGCACCTCTGTCTACAGTCCACCTGCTTTCACATCTGAAGAAGTCTACGAAAAAGTTCTGGACCTACAAGATAAGGTTAGGAAGTTCATATTAAGATTCTAGAATAATATGCACATGTTTCACCGCTCTCAAAACATTGGGGATTCATCTTTATCTGCAGGTTTCTAGTGTCAATAGGATACCTAAACCAAAACCCAAGATAGAAAAGAAACCTCCCAAGGAAGAAGAGTCTGCTAACAAAGAGAAAACTGACTCTTCGGAATCTGAATCCAAAGAAGCTGAATCCACGGAAACATCGTCGGAATCAGCTGCCCCTGAAGAGAGTCAGTCTGAACCACAAAAGACTGACGATTTAGAACCTGAAGCTCATGATGAGTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008908