BGIOSGA008914

From RiceWiki
Revision as of 03:23, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008914| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008914, complete gene.| tag = OJ1479_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008914

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008914, complete gene.

LocusTag

OJ1479_B12.25-2

Ensembl Transcript ID

BGIOSGA008914-TA

Ensembl Protein ID

BGIOSGA008914-PA

Length

5409

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31500735..31506143

Sequence Coding Region

31500735..31501081,31501289..31501350,31501622..31501736,31501871..31501994,31502179..31502259
,31502697..31503038,31503137..31503303,31503385..31504214,31504678..31506143

Genome Context

<gbrowseImage1> name=IndicaChromosome02:31500735..31506143 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:31500735..31506143 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGACTACCCGGAGGAGCTGCGGACGCCGCCGCTGTCGCTGGTGTCCATCGTGGGGTGCCCGGAGCTGCACCCCGCGATCTCGGCGGCGCTGAGCTCCAGGCAGCCGCCCATGAACTTGCTCGCCCTCCCGGACTTCTCCAAGGCCTCCATCCTCGCTCGCACCGCCAAGGCCCGCGACCCGCTCGCGCCGCCGCAGGCCCCCGCCGGGATCCTGAAGAAGGACTGGCTCCTCAAGCACCGCACCCGAGTGCCCGCCGCCGTCGCCGCGATGTTCCGGGCCGATCAGGTCTCCGGGGACCCCGCCCAGTGGCTCCAGGCCTGCTCCGATCTCGAGAACCTCAAGTCTGTGATTCAGGGAAGAAACACTAAATTAGTGGTGATCCTTGTACAGAGTCAAGCTGGTGGTGAACTGAGCGAGGATGTTACGGTTGCTCTGAGGAAACGTGCAGAAATTGATTCAAAGCACCTGGTTGTTTTGGTTGAGAGAGATGAAATGGAATGGACCAAATCTCTCAACAAGTTGACAACTGTTTTTGCGGAGTTATGTACGACATACTATAAGGATGAAGGACGAAGGGTCAAAGCTCGCATCGAGAAAAGGAATTTCTCATCTGTTGAGCTGAGCATTCGCTACTGTTTCAAGGTCGCTGTTTATGCGGAGTTTAGGCGGGATTGGCCTGAAGCATTAAAGTTCTATGAGGAGGGCATTCGTGTTCTGCGTGAGATGATAGGAACTTCAACAAGACTGCCTCCAACACAACGCCTTGTTGAGGTAAAAGCAGTTGCTGAGCAATTTCACTTTAAGATATCAACAATATTACTTCATGGGGGGAAGGTTGTGGGAGCAATCACATGGTTCCGTAAGCATATCAGAAGCTATGAGCGTGTTGTTGGATCACCAGAAGTTGCTTTTCTTCACTGGGAATGGTTTAGCAGGCAGTTCCTTGTCTTTGGTGAGCTCATAGAAACAACATCTACAACTGTTCCGGATACACTATCTCCTCGTTTTGGCACTGCTGACAACGCACTGACCGAGTGGGAATTTCAACCAGCTTACTACTATCAGTTGGCGGCAAATTACTTGAGAGAGAAGAGGTATGCCTTAGAGTTCTCTTCATCAAGTGTAAGCCTTACCAAAGGAGTCAATGGATTACCTGAGTCAGTAATGCCTTCCGTATATGTTGGTCAGTATGTACGCTTGTTTGAGCAAGGAGATACAGTTGCGGTGCTTCCCCTTTCTGATACTGAGTATACCAGCTATGCTTTGTCAGAAGCTGAAAGGTTTCAAGATTCCTATGAGATAATTGCATTGTTCAGAAAAGCTTATGAATCATTTCGGAGCCTAGGTGCCACAAGAATGGCTTCTGCCTGTAGTGGTGGAATGGCCATTGAGTATTATGCAGCAGGGGATTTTAGTAATGCAAAACAACTTTTTGATGGTGTTGCTGGCCTATACCGTCAAGAAGGTTGGGCCACTTTACTTTGGGAAAACCTAGGTTACTTGAGAGAATGTGCAAGGAAACTTAAGTCTCTGAAGGACTTTATCAGTTATTCACTTGAGATGGCTGCATTACCTTTATTCTCTGGCAGTGGACAGGGAAATTCAGAAAATAAAAGGAAAAATGGACCAGCAGGATCTCCTACCATTTCCAGTAGAGAGCTTATACAGCAGGAAGTTATTAATATCTTGGAAGGAAAGCATGCATCGGAGAACACTGATGATGAATTTGATCTTCATTTGATGGAAGAATCTACTCACCTCGATATTGATCAAATAAGTCCACTAAGGATAGTGTTTCTCGCATCTGTTGCTTTTCACGATCAATCTGTAAAACCTGATTCACCAATGCTTGTCAGTGTCTCTCTACAGTCTCATCTTCCTTGTCCAGTTATGATTGATAAGTTGGAGGTTCAGTTTAACCAATCTGACTGTAACTTTGTTATAGTTAGTGCACAGGAAGATTGTTCTGCATCAAATTCACATGTTCATGATGGAGCTGTTCAGACTCCTCTGACACTGTTCACTGATAAATGGATGCGGTTGACTCATGAAGTTAAACCAGGACAGAGTGGAAAGCTGGAATGTTTGGCGGTGAAGGCAACAATAAGTAAACGTCTTGTAGTTTGCTGCCAAGCGGAAAGTCCTGTTTCAATGGGAGAATTTTCATTGTGGAAATTTGAGGACCAAGTAGAGGCATTACCTATGAAGGACAATGTACTTGCTTTTTCTGGGCAGAAACTGATCCAAGTTGAAGAGCCAGATGCTCAAGTTGACCTTGTCTTAGATTGTCCTGGTCCTGCATTGGTTGGAGAATTATTTACAGTCCCAGTGACCATATTGTCAAAAGGACACACAGTTCATTCTGGTGAACTGAAAATCAACCTTGTCGATGCCAAAGGTGGAGGCCTTTTGATGAGTCCTAGGGAAGCAGAAGAATCTGAAAGTCATCATGTTGAACTTCTTGGTGTCTCAGATGTGACCACGGAAAATGGGTCAAAGGAAGAAGTTGATAGCATAAGAAAAATCCAGCACTCGTTTGGGGTTGTATCTGTTCCCACATTATATGCAGGTGATTCCTGGTCATGCAAATTGGAAATAAAATGGCATCAAGCAATGTCAGTGATGTTCTATGTCTCACTTGGCTATTCCCTGGACTCGACTGAAGAAGCAGCACTGCACAGACTTAATGTGCACAGAAGCTTGCAAATTGAAGGTAAGATCCCCATGATAGTCAGTCAACAGTTTTTGAGACCATTTAGGCGAGAACCCCTGTTATTATCTAGGATCAGATCCTCAAGTGATGATGATAAAAAAAGTTCTCTTGCTTTCAACGAGTCAAATATGCTTATTTTAAGTGCTAGAAATTGCACAGAGGTACCTTTGCGGCTACACACGATGACTATTGTGTCTAATGATGATGGAAAACAACTCTGCTCAGTGCAACAGATCAGTGGGATTTCCAATGAATACGCAGTTATTGCTCCTAGTGAAGAATACAAAGGAATATTTTCAGTGAATCCACATACTATTAGTCCAAGCTTTTTTCTAGGTGAAATTTGCCTGAGCTGGTCAAGAGATTCAAGCATTGGAGAGAGTCAAGATAGCCGTGTTATAATGAAAGAAAGGTTACCTGAAGTTCATATTGAGGAGCCGCCACTTGTTGTGACCATGGAGTGCCCTCCTTATGCTATCCTTGGAATCCCTTTCACTTTTCATGTGAAGATCTACAATTCAACATCCTTACTTCAGGAAATCAAGTACTCTCTTGTTGATTCCCAGAACTTCGTCTTCTCTGGGGCTCACAATCATGCTGCATCCATTCTGCCGAAAACCGAGCATATTGTTAGCCATAAGCTTGTGCCGCTTGGTTCTGGTTCCCAGCAGCTGCCAAGGATAACAATAACTTCAGTGAGGTATTCTGCTGCACTGACTCCTTCAGCCTCAGCCGCAACTGTCTTTGTATATCCCAGCGAGCCGAAATTCAATTTGGAAAAGGGCTATTCGTCAACTGATCCGTGCGTTAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MEDYPEELRTPPLSLVSIVGCPELHPAISAALSSRQPPMNLLALPDFSKASILARTAKARDPLAPPQAPAGILKKDWLLKHRTRVPAAVAAMFRADQVSGDPAQWLQACSDLENLKSVIQGRNTKLVVILVQSQAGGELSEDVTVALRKRAEIDSKHLVVLVERDEMEWTKSLNKLTTVFAELCTTYYKDEGRRVKARIEKRNFSSVELSIRYCFKVAVYAEFRRDWPEALKFYEEGIRVLREMIGTSTRLPPTQRLVEVKAVAEQFHFKISTILLHGGKVVGAITWFRKHIRSYERVVGSPEVAFLHWEWFSRQFLVFGELIETTSTTVPDTLSPRFGTADNALTEWEFQPAYYYQLAANYLREKRYALEFSSSSVSLTKGVNGLPESVMPSVYVGQYVRLFEQGDTVAVLPLSDTEYTSYALSEAERFQDSYEIIALFRKAYESFRSLGATRMASACSGGMAIEYYAAGDFSNAKQLFDGVAGLYRQEGWATLLWENLGYLRECARKLKSLKDFISYSLEMAALPLFSGSGQGNSENKRKNGPAGSPTISSRELIQQEVINILEGKHASENTDDEFDLHLMEESTHLDIDQISPLRIVFLASVAFHDQSVKPDSPMLVSVSLQSHLPCPVMIDKLEVQFNQSDCNFVIVSAQEDCSASNSHVHDGAVQTPLTLFTDKWMRLTHEVKPGQSGKLECLAVKATISKRLVVCCQAESPVSMGEFSLWKFEDQVEALPMKDNVLAFSGQKLIQVEEPDAQVDLVLDCPGPALVGELFTVPVTILSKGHTVHSGELKINLVDAKGGGLLMSPREAEESESHHVELLGVSDVTTENGSKEEVDSIRKIQHSFGVVSVPTLYAGDSWSCKLEIKWHQAMSVMFYVSLGYSLDSTEEAALHRLNVHRSLQIEGKIPMIVSQQFLRPFRREPLLLSRIRSSSDDDKKSSLAFNESNMLILSARNCTEVPLRLHTMTIVSNDDGKQLCSVQQISGISNEYAVIAPSEEYKGIFSVNPHTISPSFFLGEICLSWSRDSSIGESQDSRVIMKERLPEVHIEEPPLVVTMECPPYAILGIPFTFHVKIYNSTSLLQEIKYSLVDSQNFVFSGAHNHAASILPKTEHIVSHKLVPLGSGSQQLPRITITSVRYSAALTPSASAATVFVYPSEPKFNLEKGYSSTDPCVS</aaseq>

Gene Sequence

<dnaseqindica>1..347#555..616#888..1002#1137..1260#1445..1525#1963..2304#2403..2569#2651..3480#3944..5409#ATGGAGGACTACCCGGAGGAGCTGCGGACGCCGCCGCTGTCGCTGGTGTCCATCGTGGGGTGCCCGGAGCTGCACCCCGCGATCTCGGCGGCGCTGAGCTCCAGGCAGCCGCCCATGAACTTGCTCGCCCTCCCGGACTTCTCCAAGGCCTCCATCCTCGCTCGCACCGCCAAGGCCCGCGACCCGCTCGCGCCGCCGCAGGCCCCCGCCGGGATCCTGAAGAAGGACTGGCTCCTCAAGCACCGCACCCGAGTGCCCGCCGCCGTCGCCGCGATGTTCCGGGCCGATCAGGTCTCCGGGGACCCCGCCCAGTGGCTCCAGGCCTGCTCCGATCTCGAGAACCTCAAGTACCTCCTCTACATCTCTTGCATCGTTGATCCCAAATAGATGTGCGCATAATCAGAACTCATAAATATCACCCCTGCAATGCAAATTGGAAACTATCGACCTCTTTTGGATTAAGGACTTTTCTGAAGTATCAGCAGTGTATAAGCAGCTAGTGTAGCACAGACTGAATTCACAAATACCAAGTAATGTTCTTTTTTTTTTTGCAGGTCTGTGATTCAGGGAAGAAACACTAAATTAGTGGTGATCCTTGTACAGAGTCAAGCTGGTGGTAAGCATCCTCTCGAGTATACGTAATAGTAATACATTTTCTCGCTGAACAAGCAATTAGCACTTTAGCTTACGAAGCTTAGCTAAACAATCTGCAACTGGCCATATCTGCAACAGCATTAGATCTGTTATTTTACGCATGTCAATGCCTACACTCTGCGTCATGGGAATCGAGGGTTGGGCTTGGGCATGGGCCTTATGATAACAGACCCTTATACTCGCTTGATATTTGTGTCGTCAAACCTAACCAGATAGCCAATAACATTTTGCAGGTGAACTGAGCGAGGATGTTACGGTTGCTCTGAGGAAACGTGCAGAAATTGATTCAAAGCACCTGGTTGTTTTGGTTGAGAGAGATGAAATGGAATGGACCAAATCTCTCAACAAGTATGCTCTGAAACTTCCCCTTAATCTTCTACTGTTATATTTCTTTTTTTTTTGAAACTATCTTTTGCTCTTTTCTTTTTCATGTGTTCCTTGGAGTTATACCTACTAACCTGCATTATGTTATGTATTGAAAGGTTGACAACTGTTTTTGCGGAGTTATGTACGACATACTATAAGGATGAAGGACGAAGGGTCAAAGCTCGCATCGAGAAAAGGAATTTCTCATCTGTTGAGCTGAGCATTCGCTACTGTTTCAAGGTAGGAAGAGGAATCTCTCTCTGGTTCAATTTAGCACTGTTAGTCATTCTTAATGCCCGTGGTATTGGGACAAAAATTTTTCTTCACATGCTTGGTAAAGTCAGTAGTGCTAATGACTTCTCACTACTCTAATTTTTATTTTTTTTGGGCTGCATTCCTCTGATATTTCTGATTCTAACACCAGGTCGCTGTTTATGCGGAGTTTAGGCGGGATTGGCCTGAAGCATTAAAGTTCTATGAGGAGGGCATTCGTGTTCTGCGTGAGGTGTGAATTGGATCCCTGTTCCATGTTTGCCATAGACCTTAAAAGACTGATAATTAAGTGAATCCACACCTGACATACTCTTTTAGAAGCCAGATTATTGTGACACTGAACTCATGAGTAAATAAAGAAAGACAGCTATGGTTGCTATCCATCCAAATGTCGTATATATTTGTAATGCTGAATATACCCTTGTGCACGTGCTACTTTTAAAATATTAAATATAGAAAACACTTCATGAGGATCTCATACCTGTCTAGCATTAAAGATAATTTATCCAAGCTACCACTCTATCCTGCCCTATCCTCTCCATGTGTGTTTGCATCTTACATTACATATTGAAAGCCTTCAAGATTCCTTACTGTTTTATTTTTCCGACACTATTGCTTAAGCAGTTTCTATTGGCTTTACACCCTGCATTGACAATTGCTCTTATTTAGATGATAGGAACTTCAACAAGACTGCCTCCAACACAACGCCTTGTTGAGGTAAAAGCAGTTGCTGAGCAATTTCACTTTAAGATATCAACAATATTACTTCATGGGGGGAAGGTTGTGGGAGCAATCACATGGTTCCGTAAGCATATCAGAAGCTATGAGCGTGTTGTTGGATCACCAGAAGTTGCTTTTCTTCACTGGGAATGGTTTAGCAGGCAGTTCCTTGTCTTTGGTGAGCTCATAGAAACAACATCTACAACTGTTCCGGATACACTATCTCCTCGTTTTGGCACTGCTGACAACGCACTGACCGAGTGGGAATTTCAACCAGCTTACTACTATCAGGTTCAACCTCTCCCTACACAGCACTACAACAGAGGATGTTTCATTCCTTTTACTTGACCACACTAGTGATCTTTTTATGATGCCTTCCCTTCTGGCAGTTGGCGGCAAATTACTTGAGAGAGAAGAGGTATGCCTTAGAGTTCTCTTCATCAAGTGTAAGCCTTACCAAAGGAGTCAATGGATTACCTGAGTCAGTAATGCCTTCCGTATATGTTGGTCAGTATGTACGCTTGTTTGAGCAAGGAGATACAGTTGCGGTGCTTCCGTAAGTTCTTTGACCCTTAGTTACTTTTAGATGTTAACGTAATTTTTATATGACTACTTATATCTGACACTGTGCTTGCAGCCTTTCTGATACTGAGTATACCAGCTATGCTTTGTCAGAAGCTGAAAGGTTTCAAGATTCCTATGAGATAATTGCATTGTTCAGAAAAGCTTATGAATCATTTCGGAGCCTAGGTGCCACAAGAATGGCTTCTGCCTGTAGTGGTGGAATGGCCATTGAGTATTATGCAGCAGGGGATTTTAGTAATGCAAAACAACTTTTTGATGGTGTTGCTGGCCTATACCGTCAAGAAGGTTGGGCCACTTTACTTTGGGAAAACCTAGGTTACTTGAGAGAATGTGCAAGGAAACTTAAGTCTCTGAAGGACTTTATCAGTTATTCACTTGAGATGGCTGCATTACCTTTATTCTCTGGCAGTGGACAGGGAAATTCAGAAAATAAAAGGAAAAATGGACCAGCAGGATCTCCTACCATTTCCAGTAGAGAGCTTATACAGCAGGAAGTTATTAATATCTTGGAAGGAAAGCATGCATCGGAGAACACTGATGATGAATTTGATCTTCATTTGATGGAAGAATCTACTCACCTCGATATTGATCAAATAAGTCCACTAAGGATAGTGTTTCTCGCATCTGTTGCTTTTCACGATCAATCTGTAAAACCTGATTCACCAATGCTTGTCAGTGTCTCTCTACAGTCTCATCTTCCTTGTCCAGTTATGATTGATAAGTTGGAGGTTCAGTTTAACCAATCTGACTGTAACTTTGTTATAGTTAGTGCACAGGAAGATTGTTCTGCATCAAATTCACATGTTCATGATGGAGCTGTTCAGACTCCTCTGACACTGTTCACTGATAAATGGATGCGGTTGACTCATGAAGTTAAACCAGGTATCAGTTATATATATTATATATAGTTTATTTCATTAGATGTTCATCCACCCGCTCTCTGCACGTATTGTAACTTGTAAATGTTTTATTTCTTGAAAAGTAACCTGTAAATATTGTCATATTAGTATCTTAATCTGAACATACAGAAACAACAGGACATTACCAGTCTCATCGTTTTGCGTACAACCGATTTTAAGTCATGACACTTATTAGCAACCAAAACATAAGTTGCGGGTATAACTCTTTTATATGCGTTCTTAGCGACTTAAATGCCAATGCTGGAAAATGAACTACGATGAAAAAACATCAAAATCAACTATAAAATTAAGTTCTAAAATCCAAATTTTGGCTGTGGCTGATAGATTGAAAATCAAAATTTAAGCTTTATTCGGCATTTGCTGATGTTAACTTTTCCCCTTCTGTTAGTCCTATTATGAAATAACAATGTGAGTACTTTCTGCAGGACAGAGTGGAAAGCTGGAATGTTTGGCGGTGAAGGCAACAATAAGTAAACGTCTTGTAGTTTGCTGCCAAGCGGAAAGTCCTGTTTCAATGGGAGAATTTTCATTGTGGAAATTTGAGGACCAAGTAGAGGCATTACCTATGAAGGACAATGTACTTGCTTTTTCTGGGCAGAAACTGATCCAAGTTGAAGAGCCAGATGCTCAAGTTGACCTTGTCTTAGATTGTCCTGGTCCTGCATTGGTTGGAGAATTATTTACAGTCCCAGTGACCATATTGTCAAAAGGACACACAGTTCATTCTGGTGAACTGAAAATCAACCTTGTCGATGCCAAAGGTGGAGGCCTTTTGATGAGTCCTAGGGAAGCAGAAGAATCTGAAAGTCATCATGTTGAACTTCTTGGTGTCTCAGATGTGACCACGGAAAATGGGTCAAAGGAAGAAGTTGATAGCATAAGAAAAATCCAGCACTCGTTTGGGGTTGTATCTGTTCCCACATTATATGCAGGTGATTCCTGGTCATGCAAATTGGAAATAAAATGGCATCAAGCAATGTCAGTGATGTTCTATGTCTCACTTGGCTATTCCCTGGACTCGACTGAAGAAGCAGCACTGCACAGACTTAATGTGCACAGAAGCTTGCAAATTGAAGGTAAGATCCCCATGATAGTCAGTCAACAGTTTTTGAGACCATTTAGGCGAGAACCCCTGTTATTATCTAGGATCAGATCCTCAAGTGATGATGATAAAAAAAGTTCTCTTGCTTTCAACGAGTCAAATATGCTTATTTTAAGTGCTAGAAATTGCACAGAGGTACCTTTGCGGCTACACACGATGACTATTGTGTCTAATGATGATGGAAAACAACTCTGCTCAGTGCAACAGATCAGTGGGATTTCCAATGAATACGCAGTTATTGCTCCTAGTGAAGAATACAAAGGAATATTTTCAGTGAATCCACATACTATTAGTCCAAGCTTTTTTCTAGGTGAAATTTGCCTGAGCTGGTCAAGAGATTCAAGCATTGGAGAGAGTCAAGATAGCCGTGTTATAATGAAAGAAAGGTTACCTGAAGTTCATATTGAGGAGCCGCCACTTGTTGTGACCATGGAGTGCCCTCCTTATGCTATCCTTGGAATCCCTTTCACTTTTCATGTGAAGATCTACAATTCAACATCCTTACTTCAGGAAATCAAGTACTCTCTTGTTGATTCCCAGAACTTCGTCTTCTCTGGGGCTCACAATCATGCTGCATCCATTCTGCCGAAAACCGAGCATATTGTTAGCCATAAGCTTGTGCCGCTTGGTTCTGGTTCCCAGCAGCTGCCAAGGATAACAATAACTTCAGTGAGGTATTCTGCTGCACTGACTCCTTCAGCCTCAGCCGCAACTGTCTTTGTATATCCCAGCGAGCCGAAATTCAATTTGGAAAAGGGCTATTCGTCAACTGATCCGTGCGTTAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008914