Os12g0597500

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Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0597500| Description = Amidase, hydantoinase/carbamoylase family protein| Version = NM_001073727.1 GI:115489415 GeneID:4352706| Length = 45...")
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Gene Name

Os12g0597500

Description

Amidase, hydantoinase/carbamoylase family protein

Version

NM_001073727.1 GI:115489415 GeneID:4352706

Length

4538 bp

Definition

Oryza sativa Japonica Group Os12g0597500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25353085..25357622

Sequence Coding Region

25353086..25353172,25353538..25353575,25353991..25354065,25354292..25354420,25354838..25354924
,25355025..25355227,25355300..25355402,25355496..25355587,25356360..25356422
,25356501..25356741,25356901..25356941,25357180..25357277

Expression

GEO Profiles:Os12g0597500

Genome Context

<gbrowseImage1> name=NC_008405:25353085..25357622 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25353085..25357622 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcagccgccactgccgtcgcgtcgtctccaacctcctcgccttcgcctccacccagccatggcgacgagcgccgccgcgcgcttcctcgcgttctgtacagcgacaaggacgtgcaagctcgaaggtatataaagggaataatgaatcagcttggcctgtccattcgtgaagacgctgttggcaacatttttgggcgctgggagggttctgaggcaggactaggagcggttgcaactggttctcatgttgacgcaatcccattctcaggcaaatatgatggggtggttggtgtcctgggtgctcttgaggcaattagaatgctgaaaaggtctggtttccagccaaaaagatctttggaggttattatgtttacatcggaggagcctacaagatttggaattagctgcttgggaagccgcctaatggcagggagtgaagaactggctcgatccctcaaagaaacagttgacaatcagaatgtgtcattttttgatgctgcagactctgctggctacaagatgcatcctgaggagctacataatgtgtttttgaagaaagacgactattttgcttttgtagaattgcacattgaacagggccccattttggaaaaagaaggtatcaaaattggcgttgtcactgctattgctgctcctgcaagtattaaggtggagtttgaagggaatgggggccatgctggagcagtgctcatgcctgcaagaaatgatgctggactggcggcagctgagttggcattagcagttgagaaacacgttttggaatcaggatcaattgatactgttgggacagttggtattctgcagctacatccaggagcaatcaatagcatcccaagtaaatcgcatgtggaaattgatgtgagagacattgatgagaagaggaggaataatgtcattgagaaggttcaccaatccgcaattgagatatcaaagaaccgtggcgtgctattatcagagttcaagatcataaatcaggatccacctgctctatctgacaaatcagtcatcagcgcaatggaatttgctgcaaaacagttgaacctcgaatataagctgatgattagcagagcttatcatgattcactcttcatggccagaatatcaccaatgggtatgatcttcattccatgttacaaaggttacagccacaagcccgaagaatatgcgtcaccagaggacatggcgaacggtgtgaaggtgcttgccttggcaatggccagattatccctgcagtga</cdnaseq>

Protein Sequence

<aaseq>SAATAVASSPTSSPSPPPSHGDERRRALPRVLYSDKDVQARRYI KGIMNQLGLSIREDAVGNIFGRWEGSEAGLGAVATGSHVDAIPFSGKYDGVVGVLGAL EAIRMLKRSGFQPKRSLEVIMFTSEEPTRFGISCLGSRLMAGSEELARSLKETVDNQN VSFFDAADSAGYKMHPEELHNVFLKKDDYFAFVELHIEQGPILEKEGIKIGVVTAIAA PASIKVEFEGNGGHAGAVLMPARNDAGLAAAELALAVEKHVLESGSIDTVGTVGILQL HPGAINSIPSKSHVEIDVRDIDEKRRNNVIEKVHQSAIEISKNRGVLLSEFKIINQDP PALSDKSVISAMEFAAKQLNLEYKLMISRAYHDSLFMARISPMGMIFIPCYKGYSHKP EEYASPEDMANGVKVLALAMARLSLQ</aaseq>

Gene Sequence

<dnaseqindica>2..88#454..491#907..981#1208..1336#1754..1840#1941..2143#2216..2318#2412..2503#3276..3338#3417..3657#3817..3857#4096..4193#gtcagccgccactgccgtcgcgtcgtctccaacctcctcgccttcgcctccacccagccatggcgacgagcgccgccgcgcgcttcctcgctgccctcgcgggcgccgccgtcctcctcgtcctgctcggcggagctgctggcgcggtggtggggcacgacgacgacgcggcggcggcgcggcggacgatggaggagttcgccggattccccgcgtccgactaccgcggcgatggcggtggcggcagcggcggctcctccccgttctacgtcgactccgatgggctccagcgccaggtacgtacgtacgcacgcgattccaccgcctgcggcaggcaaaacccgtggcgcgattccgagtgacgaaatggtttctcgtttgtgtgtgtgatgatcctcgtcgcagattgatgagctggcttcgttctccgactcgccggtgccgtcggtgacccgcgttctgtacagcgacaaggacgtgcaagctcgaaggttttcccgttctcacgcccagtgcgattttctttcttttttttttttttgttctactctcatgattcgtgggaggaggtgatttcccatggatttgaactcattacagtgcttctgtgcttggtcagcaactagttgcagaaatggcttagtttatttttcaccttgataagactccgatgggatgaaccaagcttacttcgaaccaaaacgtgcttaatttgacgcccagcccgataggagttgatctcatgaacattgaattaataggtcaaactgcttcccgatagcaatttgatgtttctgattcgatgataacatttcagatggcaaatttgtttctctgctatttgtcaatgataatatgcatctctgttctatgatggttgctgaatttgtacttaaatgtttataggtatataaagggaataatgaatcagcttggcctgtccattcgtgaagacgctgttggcaacatttttgggcgctggtgagttggtattggatggttctggaaccatgtttatttgatgtatctggttttacaagtagttatctatggcaaagcaattctagcaaatgggatggcatattggaaggaacagcatatctgaagcatatctctcattatattttggtgtttctatggctatgtataaaaggaacagattgtagtggaatttttctgatcactgtaacattgcatacttctgcagggagggttctgaggcaggactaggagcggttgcaactggttctcatgttgacgcaatcccattctcaggcaaatatgatggggtggttggtgtcctgggtgctcttgaggcaattagaatgctgaaaaggtgtaaatactacctaaaagtatcttaccatttctcaaagaatttagttttgcttgtgttgcccatgttatatgcattctctttcatcaaatatcatgatgaactaccaatggaacttagtttgactcagtgcatcatacagtgtacccaagtatgcaacactcacatggggattagacattcacagtttcactatacagcttgaatatgtatactgattttaagaagacgactaattctccaccttttgatgtcacaattccaggccatataagtattaagcatagttatattttccatcttgcaacaagcatgttttaactgtattgccacacatttgaggaaacagctgaagctttgatatgctaggttggttgctcttttgtgatgaaacaaactcttgtttgtatcatacaggtctggtttccagccaaaaagatctttggaggttattatgtttacatcggaggagcctacaagatttggaattagctgcttgggaaggttgagcctcactcgcactaacttgaagcttagcttggactaattgtgccacaattatgttttgttggttattatcttttcacttctggaaaatgtgcagccgcctaatggcagggagtgaagaactggctcgatccctcaaagaaacagttgacaatcagaatgtgtcattttttgatgctgcagactctgctggctacaagatgcatcctgaggagctacataatgtgtttttgaagaaagacgactattttgcttttgtagaattgcacattgaacagggccccattttggaaaaagaaggttggattgtgagttaattaataagtttatggaaaattgttcttcttatactcatgtgtgttcttacaacaggtatcaaaattggcgttgtcactgctattgctgctcctgcaagtattaaggtggagtttgaagggaatgggggccatgctggagcagtgctcatgcctgcaaggttagcatttccattcattcttcatccatgtggtttacattattttgaaaggtccccaccacatatttacatgggtaaagaaactttttacagaaatgatgctggactggcggcagctgagttggcattagcagttgagaaacacgttttggaatcaggatcaattgatactgttgggacagttggtatgcttgatgaaattgattttattttctgttgaatatatcattctttcatgactgtgatgttttaatactccatagtaaattaggacatacatgtgcctttaccaatttgtatagcaaccaagtgaatatcaaacttgacctgcttttcaaatttagatcaattctgttctacatcctccattcttggatatcttctgcttatactataaaaagtgtctgaatatctgatgaaatgcaccaatatagaatgttgttgtacttagccatgatagttaacaactccaaaataggaaatcattttagtatttatttagaattatgaaacaataagaaagattttctaatgttttgcatcatcgtagcctagatgctcaactagaatatgttactacctccgtttcaggttataagatgttttgacattggtcaaagttaaactgtttcaagtttgactaagtttatagacaaatatagtaatatttataatactaaattagtttcatcaaatcaataattgaatatattttcataataaatttgtcttgggttgaaaatgttactactttttttacaaagttggtcaaacttaaaacagtttgactttgactaaagtcaaaacgtcttataacctgaaacagagggagtagttaagttttaatcatgaaatatatttatgaagctagtaggtggtcaagcagaatttcaagaaaatggtcaaagatatatttgcagcgataatgtttttccataatgaattattcttcttcaggtattctgcagctacatccaggagcaatcaatagcatcccaagtaaatcgcatgtggaaattggtaggagactgttttcagataaaaagaattatcgtgttctgactgccggctaagaacttctcattatcttttgtacagatgtgagagacattgatgagaagaggaggaataatgtcattgagaaggttcaccaatccgcaattgagatatcaaagaaccgtggcgtgctattatcagagttcaagatcataaatcaggatccacctgctctatctgacaaatcagtcatcagcgcaatggaatttgctgcaaaacagttgaacctcgaatataagctgatgattagcagagcttatcatgattcactcttcatggccaggtcaagtactataggccccaacagggttttccacctacaaaccaaataccctggctggcaatctctgaaacatgttatttgctttgtgtctaattatgttctttttgtggggtaacatgtttaccaactaacacgtacaactgcttctttgttctgcagaatatcaccaatgggtatgatcttcattccatgttacaaaggtctgtacaccacgtcatcacttcttgtcctactaaagatcaattacttgagatgctagaatgtttcaagatattctaatttccaccaccaattgaaaaaaaatgcgtttcaaaaataaacaatgtaacaaactaaaataaatttacaacgcatatcctggtgaatgaatataaagttcaaactaataacctcctataaaatgaattgccactgaaaaagttatccttctggttgcaggttacagccacaagcccgaagaatatgcgtcaccagaggacatggcgaacggtgtgaaggtgcttgccttggcaatggccagattatccctgcagtgagcttagacatggaggaaggaaggaatcaatgagttcagatcacccaacaccttcgtgttcctgcaatggaaacacgatgtacagcaattcctcgcgtggcaaaacaaagccatggtgattcttcaggaataataaattaataacatttggaagccatggtgattcttcaggaataatagattgataacatttggatgggcagcagaaaactagtccgtatgttttcagcgagggaataaataaataaatttctgatggcatcatcatgaatctgaatgtatcctgtgttcttgcttgaatttttctttttgaaggaaataataatagtcgatggcaaaatttagc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0597500, RefSeq:Os12g0597500