BGIOSGA008935

From RiceWiki
Revision as of 03:23, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008935| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008935, complete gene.| tag = OJ2056_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008935

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008935, complete gene.

LocusTag

OJ2056_H01.36

Ensembl Transcript ID

BGIOSGA008935-TA

Ensembl Protein ID

BGIOSGA008935-PA

Length

4006

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31754938..31758943

Sequence Coding Region

31754938..31755024,31755134..31755307,31755389..31755645,31755758..31755929,31756317..31756355
,31756451..31756519,31756599..31756715,31756994..31757205,31757382..31757540
,31757614..31757813,31757904..31758070,31758150..31758246,31758364..31758455
,31758665..31758943

Genome Context

<gbrowseImage1> name=IndicaChromosome02:31754938..31758943 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:31754938..31758943 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGGGTTCGTCGGCGTCGTGGTCTCCGACCCGTCGCTGCAGGGCCAGTTCACGCAGGTGGAGCTCCGATCGCTCAAGGCCAAGTTTCTATCTCTGAAGAGAGACTCCGGAGGGCATGCCACGACGAAGAACCTCCCGGGACTGATGAAGAAGCTGAGGGGGCTCAATGAGGTGATCTCCGAGGAGGAGATCGCCGCCCACTTGTCCCAGTCTTACCCTGACGCCGACCAGGAGATTGAGTTCGAGTCATTCCTACGGGAATACCTGAATCTGCAGTCAAGGGTGAGCGCCAAAGAAGGCGGAGGTGGTGGTGGCGGCGGTGGCAAGACCGCGTCATCTTTCCTCAAGTCCAGTACCACTACATTGCTGCACAATCTCAACCAGGCGGAGAAGTCGTCTTATGTGGCGCACATCAACACCTACCTTCGTGAAGACCCGTTTCTGAAGAAGTATTTACCAATCGAGCCTACCGACAACCAGCTGTTCGATCTTGTCAGGGACGGTGTTCTGCTATGTAAATTGATCAATTTAGCTGTACCTGGGACCATTGATGAGAGAGCAATAAATAAGAAAAGAGTTCTTAACCCATGGGAGAGGAATGAAAATCACACCCTGTGCCTCAACTCTGCCAAGGCCATTGGATGTACAGTTGTAAACATTGGTACACAAGATTTGGTGGAGGGAAGGCCTCATTTAATTCTTGGATTGATATCTCAAATTATAAAGATTCAACTTTTGGCTGATCTGAATCTCAAGAAGACACCCCAGCTGGTGGAATTGTTTGATGACAGCAAGGATATAGATGAAGTGTTGAGCTTGTCACCAGAAAAGATGCTACTTCGGTGGATGAACCATCATCTGAAAAAAGCTGGCTACAAGAAAACCGTCAGCAATTTCTCTACAGATGTGAAGGATGGTGAAGCATATGCTTACCTTCTAAAAGCTCTTGCTCCAGAGCATTCCCCTGAAACCACATTAGAGACAAAGGATCCTAGTGAGAGGGCTAAATTGGTACTTGAACAAGCAGAGAAGTTGGATTGCAAAAGATACTTGACTCCTAAGGATATCACTGAGGGTTCTGCCAATTTGAATCTTGCATTTGTGGCACAAATATTCCAGCATCGGAATGGTCTAACTAGTGACACCAGACAAGTTACTCTCAATCAGACTGCATCACGTGATGATGTTCTATTATCGAGAGAAGAAAGGTCCTTTCGGATGTGGATCAACAGTCTTGGGGTTGACTCTTACGTGAACAATGTTTTTGAAGATGTTCGCCATGGATGGGTACTTCTTGAAGTACTGGACAAAGTTTCTCCAGGATCTGTCAATTGGAAGCTGGCCTCGAAACCTCCAATTAAACTTCCATTCAGGAAATTGGAGAATTGCAATCAAGTGGTAAAAATCGGAAAGGAGTTAAAGTTTTCCTTAGTAAATTTAGCTGGGAATGATATTGTTCAGGGTAACAAGAAATTGATTGTTGCACTTCTGTGGCAATTGATGAGATTTAATATGCTTCAATTGTTGAATAGACTGAGATCCCACTCCCAAGGATCCCAAGGAAAAGAAATTACTGATGCTGATATACTAAAATGGGCGAACAGCAAAGTGAAAGCATCAGGAAGAACATCTCAAATGGAAAGCTTCAAGGACAAGAGCTTATCAAATGGACGGTTTTTCCTTGAACTTCTTAGTGCAGTACAACCGAGGGTTGTCAACTGGAAAGTTGTTACAAAGGGGGAAGATGATGAGGAAAAGAAGCTAAATGCTACATATACCATTAGTGTTGCAAGGAAAATCGGATGTTCCGTGTTTCTGCTGCCAGAGGACATCATTGAGGTAAATCAGAAGATGATCCTAACGCTTACGGCTAGCATCATGTATTGGAGTCTACAGAAGCAACCACAGTCACAATCTGAAACGTCAGAACAATCAGAGCCATCTAGTATGGCTTCGGATGCAGCTTCTGATATTGCTTCGGAGGACGCTGCTTCAATAACAGCTGCATCTGAGGGAGAAGAGGTGAATTCGCTATCTGATAGTATGTCCAATTTGACCACATATGATGCTATTTCAAATGCCTCGCCAGCAGAAAATGGAAATGGTGTGGCAGGATGA</cdnaseq>

Protein Sequence

<aaseq>MSGFVGVVVSDPSLQGQFTQVELRSLKAKFLSLKRDSGGHATTKNLPGLMKKLRGLNEVISEEEIAAHLSQSYPDADQEIEFESFLREYLNLQSRVSAKEGGGGGGGGGKTASSFLKSSTTTLLHNLNQAEKSSYVAHINTYLREDPFLKKYLPIEPTDNQLFDLVRDGVLLCKLINLAVPGTIDERAINKKRVLNPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLILGLISQIIKIQLLADLNLKKTPQLVELFDDSKDIDEVLSLSPEKMLLRWMNHHLKKAGYKKTVSNFSTDVKDGEAYAYLLKALAPEHSPETTLETKDPSERAKLVLEQAEKLDCKRYLTPKDITEGSANLNLAFVAQIFQHRNGLTSDTRQVTLNQTASRDDVLLSREERSFRMWINSLGVDSYVNNVFEDVRHGWVLLEVLDKVSPGSVNWKLASKPPIKLPFRKLENCNQVVKIGKELKFSLVNLAGNDIVQGNKKLIVALLWQLMRFNMLQLLNRLRSHSQGSQGKEITDADILKWANSKVKASGRTSQMESFKDKSLSNGRFFLELLSAVQPRVVNWKVVTKGEDDEEKKLNATYTISVARKIGCSVFLLPEDIIEVNQKMILTLTASIMYWSLQKQPQSQSETSEQSEPSSMASDAASDIASEDAASITAASEGEEVNSLSDSMSNLTTYDAISNASPAENGNGVAG</aaseq>

Gene Sequence

<dnaseqindica>1..87#197..370#452..708#821..992#1380..1418#1514..1582#1662..1778#2057..2268#2445..2603#2677..2876#2967..3133#3213..3309#3427..3518#3728..4006#ATGTCGGGGTTCGTCGGCGTCGTGGTCTCCGACCCGTCGCTGCAGGGCCAGTTCACGCAGGTGGAGCTCCGATCGCTCAAGGCCAAGGTGACCTAAAATTATCCCCGGTTTCTTCAGTTCGTTGTATAGGAAGCCGCAATTCGTCTCTCATTCGGGGTGGAATTGATGGGTTTTTTTTTTTTTGTCGGGGTGGCAGTTTCTATCTCTGAAGAGAGACTCCGGAGGGCATGCCACGACGAAGAACCTCCCGGGACTGATGAAGAAGCTGAGGGGGCTCAATGAGGTGATCTCCGAGGAGGAGATCGCCGCCCACTTGTCCCAGTCTTACCCTGACGCCGACCAGGAGATTGAGTTCGAGTCATTCCTACGGGTACAACTCGGTTATTTTCTGAATTCCTGTTGGTACATTGTTGATTTGATTGGAATGGGATTATGTGTGGTGTGTTTGTAGGAATACCTGAATCTGCAGTCAAGGGTGAGCGCCAAAGAAGGCGGAGGTGGTGGTGGCGGCGGTGGCAAGACCGCGTCATCTTTCCTCAAGTCCAGTACCACTACATTGCTGCACAATCTCAACCAGGCGGAGAAGTCGTCTTATGTGGCGCACATCAACACCTACCTTCGTGAAGACCCGTTTCTGAAGAAGTATTTACCAATCGAGCCTACCGACAACCAGCTGTTCGATCTTGTCAGGGACGGTGTTCTGCTATGGTGAGAGATGGTCTTTACAGCTAACCAAAGGGTGCATATCCATTTACTCGTTGAACAGAAACTGCCCTTGAGTCATAGCTGATATTTGCTCATTTATGGATCATTTGCTCAGTAAATTGATCAATTTAGCTGTACCTGGGACCATTGATGAGAGAGCAATAAATAAGAAAAGAGTTCTTAACCCATGGGAGAGGAATGAAAATCACACCCTGTGCCTCAACTCTGCCAAGGCCATTGGATGTACAGTTGTAAACATTGGTACACAAGATTTGGTGGAGGGAAGGGTATGCAACGCATTCCCTACTTTAAATTCTTTTTAGTAATTCATGGTGCATTGTAGTCTATGCAAATTATTTTTACCACTAATTTTCATTCAGGACTACATTGAAATACTTTAATGCCCTGTAGGTGCTAGGTAGTTTGGGTACAAAGTATGCTGTCAATTAGTCATTGTCACCACTAATTTGCTGCATACCATTTTATCCTTCGCTGTATAACCTGCTAATTGGTTCCACCTCATATTTCCTTGCTCATTTGCTGTATGTGTTATTCTTTGATATGCCTGTCCATGTGTCAGATGTTTTCAGCCGCCTTCCCTTTGTGACTTCTTCTATTTAATTCAAGAAATTCACTAAAAGTTAAGTTGTGGTTAACATGCTTCTTTTTTGCAGCCTCATTTAATTCTTGGATTGATATCTCAAATTATAAAGGTAAATGTTGCACTGAGTTTTGCATTTTGATGTTTGACATACTATGGTTAAACTCCTGCCTCATCATATAAAGATCTTTTTGCACTTATCATCAGATTCAACTTTTGGCTGATCTGAATCTCAAGAAGACACCCCAGCTGGTGGAATTGTTTGATGACAGCAAGGTAAATAAACATTCTGTCCTTCTATTAATTTAATTCACATGTTCTTAGAACAAAATTCATTTTACTGATTATTATGCAGGATATAGATGAAGTGTTGAGCTTGTCACCAGAAAAGATGCTACTTCGGTGGATGAACCATCATCTGAAAAAAGCTGGCTACAAGAAAACCGTCAGCAATTTCTCTACAGATGTGAAGGTGCATATGACATAGAACAAAGTGACATTATAATTAATTGATTATGTGCAGTTTGATAAAAGAAGCTGCCCTTGTGCTAATCCACTGTTTGGCTTGCAACATCTTTGCATTTGGGTTTCATTGACTAAGCAACAGATGGCTTTGAAAATTATTTATGACTCACTCTTATGCTGTAAATCCCCTTTCTAAATGCGTATGTGGGAAAAGTGAATCAAACTACATTCATTTAATTAATATTACTTCAATCTCCAATGTTCACATACGTTAGTTCTGTACAGGATGGTGAAGCATATGCTTACCTTCTAAAAGCTCTTGCTCCAGAGCATTCCCCTGAAACCACATTAGAGACAAAGGATCCTAGTGAGAGGGCTAAATTGGTACTTGAACAAGCAGAGAAGTTGGATTGCAAAAGATACTTGACTCCTAAGGATATCACTGAGGGTTCTGCCAATTTGAATCTTGCATTTGTGGCACAAATATTCCAGCATCGGTAAGTAGTATGTTTCTTGTTTCTCCAAAGGCATTAACTTTTCATTTTTTTATCATAAAGCTAGCTAAGGTATTTTCCCCATGTTGCAGTATATTCACTTTAAAAGTTTCTTAGCTAGCTGCCAATGAATTGGTCATCTGCTTATCACTTGAATGCTATTGTTCCATGATGCACAGGAATGGTCTAACTAGTGACACCAGACAAGTTACTCTCAATCAGACTGCATCACGTGATGATGTTCTATTATCGAGAGAAGAAAGGTCCTTTCGGATGTGGATCAACAGTCTTGGGGTTGACTCTTACGTGAACAATGTTTTTGAAGATGTTCGCCATGGGTATGAGATTATTTGAATGAGCATTTGTGTCTATCTCCAAATGAATTGGGCACTTACATCCTTTCTCATGCAGATGGGTACTTCTTGAAGTACTGGACAAAGTTTCTCCAGGATCTGTCAATTGGAAGCTGGCCTCGAAACCTCCAATTAAACTTCCATTCAGGAAATTGGAGAATTGCAATCAAGTGGTAAAAATCGGAAAGGAGTTAAAGTTTTCCTTAGTAAATTTAGCTGGGAATGATATTGTTCAGGGTAACAAGAAATTGATTGTTGGTGAGTGTGACTGAATCAAGTCTTTTTAGTGGTTTCTGATTGATGTTATCTGTTTAGCACACAATTGAAGCCATATCTGTTGTTTTTCAGCACTTCTGTGGCAATTGATGAGATTTAATATGCTTCAATTGTTGAATAGACTGAGATCCCACTCCCAAGGATCCCAAGGAAAAGAAATTACTGATGCTGATATACTAAAATGGGCGAACAGCAAAGTGAAAGCATCAGGAAGAACATCTCAAATGGAAAGCTTCAAGGTGTTATTAATTTCTGTTTAATTAGTTTTAATTTGTTGTTAGATAACTCCAGTTAATAAATTTTCTTATCTTCTCTCAGGACAAGAGCTTATCAAATGGACGGTTTTTCCTTGAACTTCTTAGTGCAGTACAACCGAGGGTTGTCAACTGGAAAGTTGTTACAAAGGGGGAAGATGGTCTGTTCATATGCACGTTTGAATTACTATTTGATGATAATTTCTGACTGTTTATATATGTATCCTTTTGGAAAACCGTAGCATTGGCTGATTCACTATTTCCTTTCAATTCTGCAGATGAGGAAAAGAAGCTAAATGCTACATATACCATTAGTGTTGCAAGGAAAATCGGATGTTCCGTGTTTCTGCTGCCAGAGGACATCATTGAGGTAAGGGATGCTAATAAGCATGAAATTGAGCGTGCAACTTTTACCATCACAGATGGAATTAAATGCTTTACCTTCAGCAATTTATCTAGCATCTGGGCTAAATGCTTTACTGTCTACATTATTTGTTGTCTGTGATCCTCTTCTCTTTTATCTTGAAAAATGATGGTTATTATCTGTTGACTAATCGTACTCTTATGTTTCTGTTTCAGGTAAATCAGAAGATGATCCTAACGCTTACGGCTAGCATCATGTATTGGAGTCTACAGAAGCAACCACAGTCACAATCTGAAACGTCAGAACAATCAGAGCCATCTAGTATGGCTTCGGATGCAGCTTCTGATATTGCTTCGGAGGACGCTGCTTCAATAACAGCTGCATCTGAGGGAGAAGAGGTGAATTCGCTATCTGATAGTATGTCCAATTTGACCACATATGATGCTATTTCAAATGCCTCGCCAGCAGAAAATGGAAATGGTGTGGCAGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008935

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA008935&oldid=62487"