Os12g0597700

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Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0597700| Description = Similar to WRKY2 (Fragment)| Version = NM_001073729.1 GI:115489419 GeneID:4352708| Length = 3134 bp| Definition = O...")
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Gene Name

Os12g0597700

Description

Similar to WRKY2 (Fragment)

Version

NM_001073729.1 GI:115489419 GeneID:4352708

Length

3134 bp

Definition

Oryza sativa Japonica Group Os12g0597700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25340474..25343607

Sequence Coding Region

25341087..25341907,25342010..25342135,25342771..25342915

Expression

GEO Profiles:Os12g0597700

Genome Context

<gbrowseImage1> name=NC_008405:25340474..25343607 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25340474..25343607 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaggaggtggaggcggcgaacagggcggcggtggagagttgccacagggtgctggccttgctgtcgcagcagcaggaccctgcgttgctcaggagcatagcttcagagacaggagaggcctgtgccaagttcaggaaggtggtctccctcctcggcaatggcggcggcggcggcggcggcggcggcggtggtggacatgctagaggcaggatggccgggagaagcaggccttcggcggtgctgagagagaagggattcttggagagcagcagcggcggcggccagctggggatgatgatgtccggtgctgccactccgtctactagctccgccgcgcatttgcgcaaccggattggcggaggcagcggcgtgccaccggattcgttgcgggggctcgatttggtcagctcgagcagcaagggtggtgctcatcagttcgatcctccgaagctggtgcagccgttgtcggttcagttccagttcggcgctaccgcgcataggtacccgttccagcagcatcagcatcagcagaagttgcaggctgagatgttcaagaggagcaacagcgggatcagccttaagtttgatagccctagtgccaccgggacgatgtcgtcggcgttcatgtcgtcgcttagcatggacggcagcgtggctagcttggaagggaagccgccgttccatttgatcagcggcccggtcgcgagcgacccggtgaacgctcaccatgtgcccaaacggcggtgcacggggagaggggaggatggaagtggcaagtgtgccacaaccggaaggtgccattgctcaaagaggaggaagttgcgaattaagaggtcaattaaagtgcccgccattagcaacaaaatagcagacatacctccagatgaatactcatggcgaaagtatggtcagaagccgattaagggttcgcctcatccaaggggttactacaaatgtagcagcgtccggggctgcccagcgaggaagcacgtcgagcggtgcgtagacgacccggcgatgctcatcgtgacgtatgaaggtgagcataaccatactcggctgccaacacagtcagcccagacctag</cdnaseq>

Protein Sequence

<aaseq>MEEEVEAANRAAVESCHRVLALLSQQQDPALLRSIASETGEACA KFRKVVSLLGNGGGGGGGGGGGGHARGRMAGRSRPSAVLREKGFLESSSGGGQLGMMM SGAATPSTSSAAHLRNRIGGGSGVPPDSLRGLDLVSSSSKGGAHQFDPPKLVQPLSVQ FQFGATAHRYPFQQHQHQQKLQAEMFKRSNSGISLKFDSPSATGTMSSAFMSSLSMDG SVASLEGKPPFHLISGPVASDPVNAHHVPKRRCTGRGEDGSGKCATTGRCHCSKRRKL RIKRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVE RCVDDPAMLIVTYEGEHNHTRLPTQSAQT</aaseq>

Gene Sequence

<dnaseqindica>614..1434#1537..1662#2298..2442#agctacggtttttttttctctttctttctcagcttcttctccaactcctctctcttcttcttcctctagtcctctcctgcctgcttcgtctactcctctcccaactccgatcccctcctctccgcgctcccggtggccggacccgtccggcgacgacgatgagccgctcgccggcacggcgccctgctcaggtgagcgagctcgccgagctcgagctcttgctcttcttctttttctttttcttcttcttttccggcgatgaattcgatgcgttcttggacggacggcctgtcgccgccatggggaggggagcccctctcgttgtggcggcggcgacgatgggccgccggagcggccgtcggaaccagggccggccgccgtcgatcgccgtcggatttgatggctggttgctcgacgagcgggaagctttagctccccccccccgggatttccggtggaatttcctgcgtttttttttgtggggggatgtttcatggagatctgtgtaacttgtcttcttctccgtgtgctgtgtttctccagatctgaagagctgcgagaatccgaggcttctcttgctggtttagctccggcggcggcggcggcggcggcgatggaggaggaggtggaggcggcgaacagggcggcggtggagagttgccacagggtgctggccttgctgtcgcagcagcaggaccctgcgttgctcaggagcatagcttcagagacaggagaggcctgtgccaagttcaggaaggtggtctccctcctcggcaatggcggcggcggcggcggcggcggcggcggtggtggacatgctagaggcaggatggccgggagaagcaggccttcggcggtgctgagagagaagggattcttggagagcagcagcggcggcggccagctggggatgatgatgtccggtgctgccactccgtctactagctccgccgcgcatttgcgcaaccggattggcggaggcagcggcgtgccaccggattcgttgcgggggctcgatttggtcagctcgagcagcaagggtggtgctcatcagttcgatcctccgaagctggtgcagccgttgtcggttcagttccagttcggcgctaccgcgcataggtacccgttccagcagcatcagcatcagcagaagttgcaggctgagatgttcaagaggagcaacagcgggatcagccttaagtttgatagccctagtgccaccgggacgatgtcgtcggcgttcatgtcgtcgcttagcatggacggcagcgtggctagcttggaagggaagccgccgttccatttgatcagcggcccggtcgcgagcgacccggtgaacgctcaccatgtgcccaaacggcggtgcacggggagaggggaggatggaagtggcaagtgtgccacaaccggaaggtgccattgctcaaagaggaggtaaactgtgttcttgtagttcttgttgtccctaccgcgtctctcatttgtcggattgagcattatgtgctttaactttatttatgctgctctgttcttcaggaagttgcgaattaagaggtcaattaaagtgcccgccattagcaacaaaatagcagacatacctccagatgaatactcatggcgaaagtatggtcagaagccgattaagggttcgcctcatccaaggtatcaactaaacctcacatgtaatcttagcaaaacgtgaatccttggttacctaatgtcagtggtcaactaacactaaaaaaacgtatctctatccattttttaaatcatgatgtggtattccccaaattgtaccttgaaagatgccatgccacatctgcatcaggcactcattgtgctcctttacctgtggaataattgtttgtggatcctccactccactccactccactccaccttttcctaatttccaagtggatctatagccaagacgtgttgataccttagttgcgagcacaattaattataaccagcttagtggattagtggatcatgacagtcttttgctatttctttactctctcctctgtggaaaaccaatatcaatcatgtgtcctaaagtaggtatattgttaatgcaacatggatttgatcagcatgcttgtctatctacatcctaatcttgattgccctcatcccccacccccatctaaactttaaagcctgcacttaatgataggaaaatgtagctatgccatgatagcaagcacatgttgctgattatttctccttcaacgcattttatttatctgcacagaagaccgacttcgctaaatcgctcgaatccgttgcaggggttactacaaatgtagcagcgtccggggctgcccagcgaggaagcacgtcgagcggtgcgtagacgacccggcgatgctcatcgtgacgtatgaaggtgagcataaccatactcggctgccaacacagtcagcccagacctaggaaacctgtagtatttcacgcgagccattcagaaaatgcagaggctccaagcttttgctcggggacggtcggaccggtcatgtgaaagtaggtcagcaaactgtgaaagtaggagtaacaaacagggaagccatctgatgagagctatagtgattcgcttgggtccttaactgagctacaagccatgtcgcatttctgctatggtctcaatgttctactgtccaaagtggggacatacacaacttgttctctcttttatgagctatggcactatcagattaagagagaatggaggaagaacatgtgattggatagtgaccggcaagatttgctcaaagaagggagggattaggtttgaagatttcaaaggaagattgacaaaaggaagtgaacaactgaaacatcgtgtaagcctggaaaaggataagcaggatttggcttttagcgtgcacaagtttacttgcaatgacttgcctctgtatgttgcttttgctttattgaaagatcaaaattttcttttggcagaagaatcattcagcattaaagctgtttctacttgctaacatactgacacacttggaccatcagggtttttttttccaggtgttagctgttgggtatgatttctcagtcgtacttctgcttttgtgtaaagcattccatgttatgttaatgactttgacatcaactgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0597700, RefSeq:Os12g0597700