BGIOSGA008964

From RiceWiki
Revision as of 03:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008964| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008964, complete gene.| tag = B1121A1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008964

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008964, complete gene.

LocusTag

B1121A12.15

Ensembl Transcript ID

BGIOSGA008964-TA

Ensembl Protein ID

BGIOSGA008964-PA

Length

2953

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32166299..32169251

Sequence Coding Region

32166299..32166680,32166755..32166855,32167793..32167890,32168561..32168769,32168868..32168920
,32169183..32169251

Genome Context

<gbrowseImage1> name=IndicaChromosome02:32166299..32169251 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:32166299..32169251 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCTCTGGGAGAGGGCGCGGGCCTTCGCCGGGGAGGCGGCGAAGCGGTCGCAGGAGCTGTCGGCGGAGGCGGCCAAGCGCTCGTCGGCGCTGGTGTCGGAGACGGCGAAGAAGTCCAAGGAGATCTTCTCGGAGACCGCGACCAAGTCGCGGGAGATCGCGGCCGAGGCCACCAAGCAGGCCGACCTCCTCGCCGGCCAGATCAAGCGCCTCTCCACCGACCTCTCCGTCCCCTCCATCCCCGCGATCCCGCCCATCCCCACCGCCGTCGCGCCGGAGCCGGACGCCGCGGAGCTCGAGCGCTACGGCATCACCGAAGACCTCCGCGAGTTCGTCAAGGGCATGACTATCAGCACCTTCCGCGACTTCCCCTTGCAAGATGAGCCGGAGATGTCGGATGTGCCCACGGTATCGAACGTGCGTCAGGATCTGAATGAGTGGCAGGCCAGGCACGCCACTCTCGTCCTCTCCGCCGTCAAGGAAATTTCAAAGTTCAGATATGAGTTGTGTCCACGATACATGAAAGAGCGTAAATTCTGGAGGGTTTATTTCTTGCTAGTAAACAACTACACATCCCTCTATGAGAACAAATATTTTGAGGAGCTGAAAGTAAAATCAGAGGAGGAAAAAATGGATGCCAAGAAGGAAGTAACAGAGACCTCACAAGCTACAACTGCAGAACATAAAGACATGAAGGTGCAAAGCAAGACTTCAACTTCAACAAATCCAGAGCATGATTTGGATGTTTTCCTTCTGGGAGATCTAGGCAGTGATGATGAGGGTCCTGATGGTGATGATGATGGGTTAGATGATGACTTCGATAAGATAGATGGCACTTCAGGCTTAGAGAGTGATGATGATGATGACAAGGAAAAAGCAGCAGGCAAGGCAGAAAGTGCAAAGGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MDLWERARAFAGEAAKRSQELSAEAAKRSSALVSETAKKSKEIFSETATKSREIAAEATKQADLLAGQIKRLSTDLSVPSIPAIPPIPTAVAPEPDAAELERYGITEDLREFVKGMTISTFRDFPLQDEPEMSDVPTVSNVRQDLNEWQARHATLVLSAVKEISKFRYELCPRYMKERKFWRVYFLLVNNYTSLYENKYFEELKVKSEEEKMDAKKEVTETSQATTAEHKDMKVQSKTSTSTNPEHDLDVFLLGDLGSDDEGPDGDDDGLDDDFDKIDGTSGLESDDDDDKEKAAGKAESAKE</aaseq>

Gene Sequence

<dnaseqindica>1..382#457..557#1495..1592#2263..2471#2570..2622#2885..2953#ATGGATCTCTGGGAGAGGGCGCGGGCCTTCGCCGGGGAGGCGGCGAAGCGGTCGCAGGAGCTGTCGGCGGAGGCGGCCAAGCGCTCGTCGGCGCTGGTGTCGGAGACGGCGAAGAAGTCCAAGGAGATCTTCTCGGAGACCGCGACCAAGTCGCGGGAGATCGCGGCCGAGGCCACCAAGCAGGCCGACCTCCTCGCCGGCCAGATCAAGCGCCTCTCCACCGACCTCTCCGTCCCCTCCATCCCCGCGATCCCGCCCATCCCCACCGCCGTCGCGCCGGAGCCGGACGCCGCGGAGCTCGAGCGCTACGGCATCACCGAAGACCTCCGCGAGTTCGTCAAGGGCATGACTATCAGCACCTTCCGCGACTTCCCCTTGCAAGGTGCGGTGTTTTCATGGTTGGGTTTAGGGAATCCATGGTGGTGGATTTGTCTGATAGGATTTTTGGTTGCGCAGATGAGCCGGAGATGTCGGATGTGCCCACGGTATCGAACGTGCGTCAGGATCTGAATGAGTGGCAGGCCAGGCACGCCACTCTCGTCCTCTCCGCCGTCAAGGTTTGTCTCAGTGAACCATTTCTTCGTTGGTTATGCATGTGTGTCCATGGGGTATTGGGGTTTTGTGACACAATTGATAGATTAGTTATATGAACCCGTGTATAAGCCAGCACGCTGTATACAATTGTTTTGTTGGGTTTACTAATCTAATTAGATGCCTATATCGAGATCACCGAAATGTATAGAATGCCGAGTTTATAATTTGTTTGGAATTCTAGAGGAAATTTCTCTTCGTCCATTCGCTGTTATTACAATGTTTTGAATAAATTGAATGCTGACTTATTAATGTCTGGGAAATGTCTAGCGTGGGTATTTGGGCTTGATATCCCATCCTTTCATATGAGCGAAGAAGTCATTAAGATAAATTTGTTAGGGTTGTCCTTGTGTCATGGAAAGGCAGATTTGCAGGTATATTCCCTTGCCGAATACCAAAATGGCAAGCTGTAAAGTTGGCTCCTATAGATAAGCTATCCTTTAAATATCACAATTTGAACTTAAATGTGGCTCCTAACATTGACTTGTCAAATATGGAAGTGATTAGAAGTTGCCTGGGATTGCCGCTTACAGAGAAGTATAGTTGATGTACCGCTATGTGGTAAGACTATGTTGTTTAAAATTGTGGCAGTAAACATATATTACCATGATTTGACTGTTAGTTGGCAAACTCCGTGTACTAACCTAACTTTAAAATCAGATAGCTGACTTATGTGGAGTTAGTCAAATCCGATTGCCTTCTTGTGCATCTTGCCTACTTCAGAAGGATGGTGATCCTGTTCTGAACTTTCTTATCACGATTAATTGCTTGTGTTTATTTTGAGTTACTAAATCATTAATCTAATAAAAAATCATTAATGCATGCTTCCATTAATATGCTGTTGTATGAATGTCTAATTATGTAGTTATCACGATTTATTAAATAGTGTTGTCTGATTTCCAGGAAATTTCAAAGTTCAGATATGAGTTGTGTCCACGATACATGAAAGAGCGTAAATTCTGGAGGGTTTATTTCTTGCTAGTAAACAACTACACATCCCTGTAAGTTTTCTTTCTTCTTAGCCCATGTTGCAATCCTTGCACAGAACTGTCAATCTTGTGCATGATAAGTTTATGTAACTGATTGGTTGCAACCTATTTTATATGACTCCTAGCATTTTTGCAGAATAGCATGTGTAATCATTAATCACACCATGATTGTTTTACACATCATATATAGCTCGGACAAATTCACTGTTCATAACAGATGTCCTAACAAAATAGTCTGTTGCAGTCTACAACTTCAGTATATTGTTTGTCATTTATCCTAGTTGGCAGTTATCTCACTTGTTGAAGGAATGCAGAATCTTTAATCTGGGTTGATCTAGTTCTGATTCTTTCTTCTTCTTTTTTTGTTTTACCTTTCAATTACTTTGATGATGACTGGAAAAGTTGCAGTGATAGCTGAATTGAGTTCAATTGTTTGGTTGCTAATATTAGGATGCCTTCTTTTCTCAACTTCTGTGGTTTGGGAGTGAAAGTTTTTGTCTTCATTGTAAATTGGCAAGTGGCAAGATTGATCTGTCTTCACTGTACTAGTTAAATCATTTGTTAACTGATTGACTTGTTTGTAGCTATAATAGACTGTTGATTTGTAAATACTAGAACAGTATAATAGACAGTCTTGCACACTGACGTTGGTCACTCACAGACTTTAATGTAAACAAAACAGCTATGAGAACAAATATTTTGAGGAGCTGAAAGTAAAATCAGAGGAGGAAAAAATGGATGCCAAGAAGGAAGTAACAGAGACCTCACAAGCTACAACTGCAGAACATAAAGACATGAAGGTGCAAAGCAAGACTTCAACTTCAACAAATCCAGAGCATGATTTGGATGTTTTCCTTCTGGGAGATCTAGGCAGTGATGATGAGGGTCCTGGTATGCTATTCATTTTCCAAAACTGATGCATCAATTGATTTGCTTACTGATTCTGCAGTTATTTTATATGATTTTTTTTTTCATTTGCTTACTTCTAGATGGTGATGATGATGGGTTAGATGATGACTTCGATAAGATAGATGGCACTTCAGTAAGTTCCCTGCTCCCTTGAAATAGATGTTTGCTACAGAATTTAAGATGGCATATATTTGTTGTTTCATACATAACAGAATGTAGCTTGGTATGTGGACATATATTATTGGAAATATAGTAAATTGTACATTGAGAAGTTCTCATTATCCTGCCAATGCATGGCCGTATACTATCAGCCGTTAGTCAAGTGTGTTCATGACCAGCCAAAATCTTCGCAGCTGTTTGGTTTGTGCTGACAGCACAACATCTTGCTTTTGCAGGGCTTAGAGAGTGATGATGATGATGACAAGGAAAAAGCAGCAGGCAAGGCAGAAAGTGCAAAGGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008964