BGIOSGA008980

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Revision as of 03:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008980| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008980, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA008980

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008980, complete gene.

LocusTag

OSJNBA0072H09.38

Ensembl Transcript ID

BGIOSGA008980-TA

Ensembl Protein ID

BGIOSGA008980-PA

Length

3583

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32374366..32377948

Sequence Coding Region

32374366..32374471,32374576..32374656,32374752..32374928,32375567..32375737,32376177..32376386
,32376572..32376660,32377256..32377948

Genome Context

<gbrowseImage1> name=IndicaChromosome02:32374366..32377948 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:32374366..32377948 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGTGGGGGGAGAGGCGGCGGCCCCGTGGTGGCGGCGCTGCTGCTGGCCGCGCTCCTCCTCGCCGCCGTCGCTCCGGCCTCCGCGTCGTCGTACCCCGCAAAGGTGGTGAGTGGGTTCCTCTCCAACGCGGCGTCGTCGGTGATGAAGCGGCTGTGGTCGCTCAAATCCACCACGAAGACAGGAAGCGGAGGGAAGTCGATGGTGAAGTACGAGGGCGGGTACACCGTGGAGACGGTCTTCGACGGGAGCAAGCTGGGGATCGAGCCCTACGCGGTGGAGGTCACCCAGGGCGGCGAGCTGCTCGTCATGGACTCCATGAACAGCAACATCTACAGGATCGCCCTGCCGCTGTCTCGATATAGCAGACCAAAGCTTGTAGCTGGTTCTCCGGAAGGATTTCCTGGTCATGTTGATGGAAGGCCTCGAGAGGCCAGGATGAACCATCCAAAGGGATTTACGGTGGACGGCAGGGGTAACATTTATGTGGCTGATGCTATGAACATGGCTATTAGAAAGATCAGTGACACAGGGGTTACAACTATTGCTGGGGGGAAATCAAGCAGAGGAGGGCATGTTGATGGACCAAGTGATGATGCAAAATTTTCTACTGATTTTGAAGTCCGCTATATTGGCAGTAGCTGCTCCCTTTTGGTGATTGACAGAGGAAACCAAGCGATTCGGGAGATTCAACTCAACTTCGATGACTGTGTATATCAGTATGAAGCTGGTTTTCCTCTAGGAGTTGCGGTGCTTCTTGCTGCTGCGTTCTTTGGCTACATGCTCGCGTTGCTCCAACGCAGGGTTTTAGGGATGGTGTCAACAGAAGATGAACCTGAGACTCAGACTCCACTAAAAGCTAGCATTGCAAGCATCCCTCCATACCAGAAGCCGCTAAAACAATCTGTCCGTCCACCGTTAATCCCAAATGAGGATGAATCTGAGAAACAAGAGGTTGAAGAGGGGTTCTTTACCTCAATCGGTAAACTCATCGTGGGAGCCAAATCGTCTGTTGCAGAGATAGTTGGTGCAGCCTTTTCCAGAAAGAAGCGTTTAAACATTCATCAGCAGCAGGCTAGAGTACGCTCTTGGCCGGTTCAAGAAAGCTACGCCATCCCGCGGGATGAGACGCCTCCACCACTGGATACAAGAACTCCAACCCCACGCAAGAACTATGCTTTCATGTCAAAGGAGCCCGAAAAGATCCACCACATCCGGCATGGTCGGTCTCAGTTCAATGGTTGGAACGGAGACGCACCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAATACATCACCAGCAGTACTTACAGCATCATAGGCAGTATTCATCAGGACCGCAAACTTTCTATGAGCCAAGCTGTGAGGCAACAAACGAGATTGTCTTTGGAGCCGTGCAGGAGGTAGACAGCAAGCGCCGCGCTGTGGAGATCAAACCCATGAACCATGGCGATCCGCAGTATGACCAAGATGGGTTGCGGCACCGCAGCAGCTACACCGGTTACAGCAACAACTGGTAG</cdnaseq>

Protein Sequence

<aaseq>MEGGGRGGGPVVAALLLAALLLAAVAPASASSYPAKVVSGFLSNAASSVMKRLWSLKSTTKTGSGGKSMVKYEGGYTVETVFDGSKLGIEPYAVEVTQGGELLVMDSMNSNIYRIALPLSRYSRPKLVAGSPEGFPGHVDGRPREARMNHPKGFTVDGRGNIYVADAMNMAIRKISDTGVTTIAGGKSSRGGHVDGPSDDAKFSTDFEVRYIGSSCSLLVIDRGNQAIREIQLNFDDCVYQYEAGFPLGVAVLLAAAFFGYMLALLQRRVLGMVSTEDEPETQTPLKASIASIPPYQKPLKQSVRPPLIPNEDESEKQEVEEGFFTSIGKLIVGAKSSVAEIVGAAFSRKKRLNIHQQQARVRSWPVQESYAIPRDETPPPLDTRTPTPRKNYAFMSKEPEKIHHIRHGRSQFNGWNGDAPQQQQQQQQQQQIHHQQYLQHHRQYSSGPQTFYEPSCEATNEIVFGAVQEVDSKRRAVEIKPMNHGDPQYDQDGLRHRSSYTGYSNNW</aaseq>

Gene Sequence

<dnaseqindica>1..106#211..291#387..563#1202..1372#1812..2021#2207..2295#2891..3583#ATGGAGGGTGGGGGGAGAGGCGGCGGCCCCGTGGTGGCGGCGCTGCTGCTGGCCGCGCTCCTCCTCGCCGCCGTCGCTCCGGCCTCCGCGTCGTCGTACCCCGCAAGTGAGTGACCACGCCTGCAGCCTCCCCGGGTTCGTTGGCTTCTTCGCTCCTTTGCTGATGGATGTGTGTGTGTGTGTTTTTTTTGGGGGGTTTTGCCATTGCAGAGGTGGTGAGTGGGTTCCTCTCCAACGCGGCGTCGTCGGTGATGAAGCGGCTGTGGTCGCTCAAATCCACCACGAAGACAGGTGATTGCTGGAATCTTTCTCGTGCTCGTGGCGTTTCTCCCCCTGGGTTTTGGTTGTTTGAAGCAAATTTTCGCTCTCTGATTGCGATGGAGCAGGAAGCGGAGGGAAGTCGATGGTGAAGTACGAGGGCGGGTACACCGTGGAGACGGTCTTCGACGGGAGCAAGCTGGGGATCGAGCCCTACGCGGTGGAGGTCACCCAGGGCGGCGAGCTGCTCGTCATGGACTCCATGAACAGCAACATCTACAGGATCGCCCTGCCGCTGTCTCGATGTGAGTGAGCCCCTATCTTCGCTGCCTTCCTAAATTCGGCTGGTGGCAATGCTAGTGCCCAGTGGGATTCTCGCGTTCTGCCAATTAGATGCTTGTAGTGTTTGTAGGGGTGATGCTGATGTTGCGGGTTGGTTGGTGGTCATGAATTTTGGTCTGCCTTGGTCTATCGCTTGATTGCGATGTGTTTGTTAGCTTTCAGTTTGCGATTGCGATACTTTTTTAAGTGCCTTTTGGTTGGTTTATTTGTCTTGATTACCCACAGTTTATGTTCAGCCAACATTTTACTATATTGTAGAAGTGGCGCAATCTGGTTGAGACAACCCTTTCAATAGCCTCATCAAGATGGCGGCGGCGCTATTGTATTCTAGCATTAGAATGACAACCCTGAGACGTTGATACTTGAAAGCCTGACTTTCATTAAACATTGATTAAACATTGCGCTTTATGGCTTGCACCTAGGACGATATCATGTGTGCATCTTCTGAGGCAATGAAATGGAAAATCATGTTTCACGTAGCAGCAAATTATTTTCAGCTACACTGAATTTCATCCGATCTTCGCATGTTTCACATAGCAGCAGATTATTTCAGCTACACTGAATTTCATCCAATCTTCTGAAAATGGACCAAACAATGCAGATAGCAGACCAAAGCTTGTAGCTGGTTCTCCGGAAGGATTTCCTGGTCATGTTGATGGAAGGCCTCGAGAGGCCAGGATGAACCATCCAAAGGGATTTACGGTGGACGGCAGGGGTAACATTTATGTGGCTGATGCTATGAACATGGCTATTAGAAAGATCAGTGACACAGGTAAGCTAAAATGTCCTGTGGTGGGGGTATTTGCACATGGTTTTGTCTGTTCCCTAAGCATCCTATGTCTGCCTTTTGGTTTTTGCTGGGCCTGTCCAACATGTATTTAGCACTTGCATCCAAAATAACAGATGAGAAGAGTAAACCAGCCAGGCAATATGAAGATAATATATTTAGTTTGAGGAAAGCAAATCTGCTTAGACCATTATCTCTGGAAAACTGCAAGGCATAAATCTTAATTTTGTTCAAAGCATTTATTTCTTTCCAAACTTATACTCAGGAAAAAGATCCTGACAACATTTGCTGATACATAGACTTGATGTTAACTGAGTTTGATTTCTTGGTAAAATTAGAAAGGCATGCTGCCATCATCATGCACATGTTTGTCTAATTTGTAGTAAATGGGAAGGTCTTGACTTGGAAGTGTTCTGACATTTAGGGGTTACAACTATTGCTGGGGGGAAATCAAGCAGAGGAGGGCATGTTGATGGACCAAGTGATGATGCAAAATTTTCTACTGATTTTGAAGTCCGCTATATTGGCAGTAGCTGCTCCCTTTTGGTGATTGACAGAGGAAACCAAGCGATTCGGGAGATTCAACTCAACTTCGATGACTGTGTATATCAGTATGAAGCTGGTTTTCCTCTAGGTATATCTTCATATCATACCCTGTTCTTGTTTCTATAGACTATTATTACTTGACCCATAAAACCTGATGTTGAAGCATTCAATCTGAGTAGATGTTTAAATTTAGTTTGTATCTGAGGGAATGTTGACCTGTACAATACTTGCAAGTTGCAAATAACTAATTACATGTATTTTGTATACTGACAGGAGTTGCGGTGCTTCTTGCTGCTGCGTTCTTTGGCTACATGCTCGCGTTGCTCCAACGCAGGGTTTTAGGGATGGTGTCAACAGAAGATGTAAGTACTAAGTCTCAACATGACAGAATTTAATTGGTAGATTGTCAGAGTTAGATAATAAGGCAAGGGTTAAAGTGGACCACAGACCTGCTGTAACCGAGCAGGCCAGCACATGAATATGTTGCCATCAGTCTTTTGTCACTCCTGGTACTAATGTCCATCAGACCATCACCCACTGGCCCCAGTCTGCTTCCTGCTTCCTTACTATGTCCACACCTACCCCGATTTTACCGTCTCATGTGAAAACACACTGATTGAGTGTTCTTAGTGGAATTGGTGGGTAAATGCTAGCAGTAGAAGTTTTGGAGTATAGTTGCTAATTCCGGTTAACATTACACAGAACAGAAACTTCTACATATCTAGACTAGCTGTAAAATTACAGCTACTACTTGTTTAGTGATTTGCTCATTGTGATAGTTGTATAACACACACACACACACGCCCCCTAAAAAAACCCTAGTAATTCTTTATTTTTGTGCTAGCTTTCTCATGGTGCTAGGCTTGACAAGATTAGTACTTGTCCGCATACACTATCTCATGTGTTCTTGCAGACAACTGGAGCTACATTGTTTTGAATTCAATTTTTACCACGCAGGAACCTGAGACTCAGACTCCACTAAAAGCTAGCATTGCAAGCATCCCTCCATACCAGAAGCCGCTAAAACAATCTGTCCGTCCACCGTTAATCCCAAATGAGGATGAATCTGAGAAACAAGAGGTTGAAGAGGGGTTCTTTACCTCAATCGGTAAACTCATCGTGGGAGCCAAATCGTCTGTTGCAGAGATAGTTGGTGCAGCCTTTTCCAGAAAGAAGCGTTTAAACATTCATCAGCAGCAGGCTAGAGTACGCTCTTGGCCGGTTCAAGAAAGCTACGCCATCCCGCGGGATGAGACGCCTCCACCACTGGATACAAGAACTCCAACCCCACGCAAGAACTATGCTTTCATGTCAAAGGAGCCCGAAAAGATCCACCACATCCGGCATGGTCGGTCTCAGTTCAATGGTTGGAACGGAGACGCACCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAATACATCACCAGCAGTACTTACAGCATCATAGGCAGTATTCATCAGGACCGCAAACTTTCTATGAGCCAAGCTGTGAGGCAACAAACGAGATTGTCTTTGGAGCCGTGCAGGAGGTAGACAGCAAGCGCCGCGCTGTGGAGATCAAACCCATGAACCATGGCGATCCGCAGTATGACCAAGATGGGTTGCGGCACCGCAGCAGCTACACCGGTTACAGCAACAACTGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008980

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA008980&oldid=62532"