BGIOSGA008983

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Revision as of 03:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008983| Description = BGIOSGA008983| Definition = Oryza sativa Indica Group BGIOSGA008983, complete gene.| tag = | tid = BGIOSGA008983-TA|...")
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Gene Name

BGIOSGA008983

Description

BGIOSGA008983

Definition

Oryza sativa Indica Group BGIOSGA008983, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA008983-TA

Ensembl Protein ID

BGIOSGA008983-PA

Length

8267

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32403829..32412095

Sequence Coding Region

32403829..32404010,32405200..32405275,32410836..32410897,32411333..32411432,32411829..32411992
,32412080..32412095

Genome Context

<gbrowseImage1> name=IndicaChromosome02:32403829..32412095 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:32403829..32412095 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGGGGGAAGATAGTGATAAGGAGGATAGACAACTCGACGAGCAGCCAGGTGACGTTCTCGAAGCGTCGGAACGGGCTTCTGAAGAAGGCGAAGGAGCTATCCATCCTCTGCGATGCGGAGGTCGGCCTTGTCGTCTTCTCCAGCACCGGCAGGCTCTATGAGTTCTCCAGCACCAACATGAAAACTGTGATAGACCGGTATACCNACGCAAAGGAGGAGCTACTTGGCGGGAATGCAACTTCAGAAATTAAGATTTGGCAGAGGGAGGCAGCAAGCTTGAGGCAGCAACTGCACAACTTGCAAGAAAGCCACAAGCAACTGATGGGTGAGGAGCTTTCTGGCCTAGGTGTTAGAGACCTACAAGGTTTAGAGAATAGGCTTGAAATAAGTCTACGTAATATCAGAATGAGAAAGCTTCAGGCCTGTGAACAGAGAGGTGCCACAGATGCAAATGAAAGTTCCAGCACTCCATACAGCTTTCGTATCATACAAAATGCTAATATGCCTCCTAGTCTTGAATTGAGCCAATCACAGCAAAGAGAAGGGGAGTGCAGCAAAACAGCTGCTCCAGAACTGGGACTTCATCTGCCTTAA</cdnaseq>

Protein Sequence

<aaseq>MGRGKIVIRRIDNSTSSQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTNMKTVIDRYTXAKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKLQACEQRGATDANESSSTPYSFRIIQNANMPPSLELSQSQQREGECSKTAAPELGLHLP</aaseq>

Gene Sequence

<dnaseqindica>1..182#1372..1447#7008..7069#7505..7604#8001..8164#8252..8267#ATGGGGAGGGGGAAGATAGTGATAAGGAGGATAGACAACTCGACGAGCAGCCAGGTGACGTTCTCGAAGCGTCGGAACGGGCTTCTGAAGAAGGCGAAGGAGCTATCCATCCTCTGCGATGCGGAGGTCGGCCTTGTCGTCTTCTCCAGCACCGGCAGGCTCTATGAGTTCTCCAGCACCAAGTAAGCAATCCATCGGATTTATAAGTATATATGTATATTTCCCCTAATTTAATTGTAGTTTCCTTAGTTGTTCTCGGATCTGCTTTGAAGTCTCCTTTTGTTCTTGATTTATTTTTGAAAGAACTCTCCTTGTTCTTTCACTTGATAGGTATATATATCTGGTTCTGGTAATCTTTCATCCTTTTAAGTTTGAGACGTTTTTATCAACAAAATGACCCAAGTATATGTCTGATCAGCTTTTCATCCTTTCAAGTTTTGAGGCATTTTATCAACAAAAAGACCCAAGCTAAGCATATATGTATGCATGGCTATTAGTCATTCTTGTGATCTTTTAGTAAGCTATAGCTACATAGCAATCAATATGTATGCATATAGTGTCAGTTTAATTGTGATATTTTCCCTCCGTTCTCGAAAACAATTGACACTTGGCACTACTAAGTTTTGATCACTCCTTTTCTTTCAAAAAATTTATAAACACTTAAAATATGTTATATTATTAAAGTATGTAGCGTAGAAAATATAACCATACAACTTCCATTCATCATCGCCTAATTATTTCAAAGTAATTTGTGATCAAAGTAACAGCCGTAGTACTCAACCGTGTCAACCAGTCAGTTATTCAAGAACTGAGGGAGTAAATATTGAATGCAAAATTAATATGAAATTTTTTTCTTCTGCTATATATCCTTTTTCAGCGTACGTATGTTCACTCTTCTGAATTGATTACAACTTAGAAACTCAAGGTGGATATATAGCGAAGAAATATTAACATGTTAACGTTTAATAAAATTAGATGAATTTGTTCTCTTTTTTTTTTGTTTCAAGTGATGTTGATTTGTACCAAAATCAGATGGCATGTGTCCTAACACAACCTTTGCTCCTAGTTTATCACGGTCAAACTTATTAATTAAAGAGATTTAGCATGCAATCTTGACAATCAAATCTTTACAGAGAATGGCATTTCTATATATGAAGCCTTACATGCATGTGCATAAATATTTTTTTGGAGCTAGAGTGTGGTAGCTTTACGTGCCACTGCATCAAAGACAGATAGATATTTCCAGATTTTTAAATATCTATTTATCTGTGTGTTTTGTCTAAGTAAATTGAAGGTTTTTTAATATAAGCTGTATGTTTTAGCTAAAAATGAAACAACTGACTCAACCATTTGGCTTTACTTGCATGCTAGCATGAAAACTGTGATAGACCGGTATACCNACGCAAAGGAGGAGCTACTTGGCGGGAATGCAACTTCAGAAATTAAGGTATGGTTAAGAAGATAAGCTATCTTGTTAATTGTTACTATACGAGAACACGCATGTGATCTTGATCTGACGACCAATGACAGCTTTTAGTCTCTTTAAGATTGATTTTATAAATAAGATGCTGATTGGCCAACTAGTTAAAGTGCTGAATGCACTGTGTTCTCATGCATGCATGCAGCTGGGCATGGTGCACTGCTCACGCTGAAGAATATAGTGAGAAATTATTTCTGAACCCCTCTGGCTGATGCAGGCATGCAGCAGGGGTTGTTACTGAATTACATATGCATTGTTTACTGTATATATAGACGCAAACCTTTTTATAAAAAAAATTCATGAGAATTTTAGATGTTATCATTTCTAGGAGTTTTTTTTTCTAGATAGTCCTTTTTAAATCAAAATAATGAATTATATGAAATCTTACAAAATTCCTATGAAATGTCTTTTTCTCGTATAAGTTTTGGAGGAGTTCTTGTGTTTTTCCAACGGCATAATCAAACGCTCATTTATATATTTTTCATGTGTTTTGTAATCATCTGTTTTACACTTACACTTGCATTTCTGTGATTCAAAGCGCCCTCAACATTTTCCTATCTTCTCCTTCCAGATGCCATATATAAAAAACTGATGCGTGTTGTGCCTAATGCTGATAGTACCAACTCCTATAACTGGAGAACTCCAGCAACTCCCCTCAAAGGAGCTGAATATGGGCACAGTATATGCGCACAATCCGATAGTACAGAATCTTCTGAACTTGAGGTTGGCAAGAGCTGCAAGCCACGCATGGGCCAAAGGGGGCAGATTGCTGCAGGTTCCTAGATTAGGACACTGGGCCCAACCATAATCTAACTAAACCCCTGCAAACTCCTCAATTATCAAGCGTGTTCTGGAGCAGGAAGAAGCACTAGTCGATCTCCCTCGGTTAATGCATCAACAGTAATGCATAGGACGAAAGTAACCGAGCAATTCGTAATCTCAACATAAGCAAAAACAAGCATACTTTAAACAAGATAAAACAGTGTACAATACAAGAGCTTGCAGAGTATTGTATAGGCAGGAGAAGCATTTGATGGTAGTGCAATATAATGCTGTACAAGTTGCTTGAAAATAACATGCTCAAGTCTTAATTTCTCAGTAATTAACTTTCTTCATAGTGGCCACACTGGTACTCACTCCCGTTACTCCACTACTTAGCTTCTCACGTTTTCATGAACCACACACTTCCATCAGCATCTGAGGGCATCAGGGCAGGCCATCCTCAAGTTTGCAAATGATGGAAAATCCATGCACATCCTGACATCGAACGTTCAGCCAAAGAAGCATATGAAGATCATAAGGCGATTCGTGAAAAAAAAAAAAGGGGCAGATTATAGGTGCATACGTACCTTTTGGCACGATAAGGACTTCGCTGATTGCATTGGTCCAAGATACAGCGCAGTAATTTCGCTGCATCTTATGACAACCACAAACTCAGAAAACAACACCCAACACATACTGAACCTGTCTGAGTATCTAACATCCATATTTCAGAGGGGGGAAACTTACTCGGTATATTTATGCATTATGTGGCAACTTGGAGGTTAAAAACAGTTGGAGACTCGAAAGGAAATCTAAAAACTGTTAGAAAATGGTTTTCTAAATAACAGATGCCAATAGCGTAAGCAGAATGGCTGTAAAGCAACAAAGCCAGAACAACAAGGATACATAGCAAACCAAGTGATATTAACAGTTAAAAGTACCGTTGTTGCTCAATTGACCAGTAAACTCGACAGACAATTGTAAACATAAAAAATATATACCTTAAGAAACAAACCGTCTACGCATAAAAATTTCACTGCTGCTGATGGTATGATATTCATGTTACTGAATCATGGGGAATATGAAGTGATATTTTCAGGAGTACTAGCTTATGTACTCCTTTATGAATTTCATTTCCATGTCATCATTTATTTAATGTTTATTCTTTCTATATGTTAAGGAAAAGGTCAAAACAAGCATCCACACCTACATGGTCTCAAAGAACTGTAGTACATAGCATGCCCCCACAGAGATCCTTCTCTTTCCCTCTATTTTGGCTTCAAAAATGCCATCGCTCATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACCATTGCATTTGCATATACTCCAGAATGATGATTTTTTTATATTTATATTTATCTTTTAAAAGTTTTAAAAAATAAATCACAGTTTTAAAGTTTTGCGAAAATATACTCCTCCCATCATACCATAGGGCGGGGCTATATAAATTGCCCTATCGTAAGACGGGCTATGTGATGTGGCACAAAGTGGAAGGCGCACACTGGCCTCTTCTCGCCTCCCCGTAGGCCGATTTAATTTGGTGACAATAGTAACAGTTTGGTGATACATGGAGCATGCCATGCAGATGGCTCCCTCCCGGCGATAAATTTCCCTCCCCTAGGGAGGGCGATTTATCGCTAGGAGGGGGCACCTGCAAAACTGACATGGAATGCTCTCCCACGGGGTGCATCGTCAAATAGATTGCCGTACCGTAGGGCGATTTATATGTCTCGGCTTACGGTACGGCGGGAGGAGTATATTTATATAAAACTTTGAAATATGATTTTCTTTTTAAATCATTTTTTAAAAATAATATAAAATAATAAATCCCATAATGATAGCGACACAACCTAATATTTTCATAGTGCAAATAAAATACTAGTAATAATTAAAAGGGTTTAATATTGGAGATCTTTGAGCCTCCATCGTTTCGCCAACAGCTCATTATAACCATAATGCTTATTAATGATAAAAAATAATCCATATGTAAAACTTTTATACATGAACTTAGTGGGAAAATAAACTGTTACGATGATAAAAAAAATCAAAATCAATTATAAAAAATAAGTTTTAAAATTTAATTTTTAGTTAGGACTGATAAGCTGAAGAGAAAATGATAAACGAGTGTCTAATATACCTTTTTCAGTTATCGTTGAGCTGTCAAGGTAAGGTCATCCATTATCTTTTTTACACTATCTACAATTATACTTCGAGTTTAAACTTATACTACATTTTTAAAGTGGTATATCACGTATTGGTATATCCTACTAAAATTTTCTCTTTAGGTGACACGAAGGAAACAGGGAGATGTTCCCTTGATGAAAAACAACACCTCTACATTCCGTTCCATCAAACCCACTGCCCACTGGCCACCTTATGAATGTGTTCAATGGCTGAGCTTATTAGTGTGGCTCGCGAAATAAGGTACTAGGTTGTTAGCATATGCTTTGTTAAGTATTAATTACTCCTTTAATACTCCTTCCATTTGATATATATAAGTATTTCTAGATTCATTAATAAAGATTAAGGTATTAATTACGCCTTTTATTTTTTCATAAAAGTATTTCTATTAAGGTTGAGAACAAAATATTTTAGTACACCTTGGTAAATAAGGGATGTATGGAGGTGAGAGAATATGTGGGGGTAGGATGAGAGTAATTCTGAGCGAGAGATGATTGATGAGATAAGTATACTGTAAATAATGCTAGAAATCACTATTTGTCGAAACAAGATTTCGGCAATAATAAAAGGGGGTGGCTATCAAGCTAGAAAAGTGGATGGGTTTAGAGACAAGGAATTTTATACAGGTTCAGGCCTTCTTATTTAAGAAGTAATTTCGTGAAGTTTTTGAGGGTGGTTGATTCCGGGGATGATTCCGCCGAGTGTGTTATTGATNGTATGATTGGAAGAAAAAGAATCGCCCCGACAGGAACCCGGACCCCTCCTTATATAGGGGAAGGGATCCATAATACAAAGTACAGTCCATATTCTAACGGAATATCAATATTTGGTACCGTATATTCTATCTATATTTGGTACCGTATATCCAGCTGAAATATAACCGCCATGTAGATATGGGATAACCATAATCTCCACGTAGCCCCCGAGACCTTCGCAGTTGACCAAAATAGTCTTCTCGAAACAAAAAACAATAATCCGAGTGCTTCAATTCAACTTGCTCCGGCTTGCCGAGTGCTAAAAGACTGTGAAGGGCGAAAATAAAACATGGTGCATCGAGTAGATGTACCTAATTAGGTGTAGCCCCCGACTATGTGATTAGTTGAAAAACTAAACATATAGTCAAGAACCGAGCGATTTTATATCGAAGCATGCATGGTACTCAATAAAATACCCACCCGACTGCTTCTCACTCGAATATATCAAGGACAAAAAAATATGAAAAGGGCCGAATGATAAACACTCAAAAGGTCCAAAAATAGATATATTTGGTAGGAATCCGAGTAAGAAACTCTTAAAATGATCCACCAAATATGATAAAGATCCATGGTAATTAAGTTCATTAGCCTAGGCTATAACCCTTACCATAATCNAATAAGCATATAACATGCTAGGAGAATGACTACTAATAAACCAGTCATCTCAAATTAACCCAACAACTTTTGTAGCCTAAAAAAGCTTACCAAAATGGTATAACACCTTTCTGTCGGGCACCTTTTCATGTGCATCATAATAATTCCAAAGAATTATTGAATCGCGTTAAAAAGGATTTTAACAGCATCGGGCCGCATCATTGTGAGTACATATTGCCAAAGCAAAAAGCGCCTAAATCCCTAGGGATCACAACGGGCCACGCTGAAAACATAATTGGGCTGAAGTACTGTACAGGCCCAGGCCCATTAGTACTCCCGATACCCTAAAAACACCGAAGTCCAAACATCGTTTCGTCTTCCCCGCCGAGACTCTCGCCATTCCCTACTCCGTGCTACAGTACAGAACCGCGCCGATGAAGCTAGGGTTCATCAATCTGCTCCAACCCACCCTCAAAAACTTCACGAAATTTCTCCCCGCGTCCACCGCTCCGATTCCCCATTCCTCTCCAGCCATATCTCGGACCAAATTAAACCATCCAGTTCACATTCATGGCGGAAGAAAGAGAAAGCTTCGAGAGTTAGTGGGCGCCCTCCAATGTGACAGAAGATAATCTGAAGGAGATGGTGGCGCACGGCGTTCTCCCAGCAAAGGAGATTATCGGGTGGCGACCGACGTTTGGCGAAGTATTCCCGACCCCCGACACACACGAAATCGTGGTATTTGCTCATTTCTTCTATGGCGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAAGTTCAGTGTGCAAATTTTTCAGCTAGGAGTTTAGGACCAAAGGTTTAAAAGTCTAATGATGATGAAACAACCAAGCTACTGGAGCACTAGACAAAAACAAGTGTCAGCTGAATTGACAAGTTGGTCCAAATTAATCTAGAATAATAAGCACTGAAGACTGAACAACTATAACACTCTGATGCACTTGTGCTACGCATATCCCACATCTTGAGATATTGGAACTATGTGAATCAGATAGCATTTTACCTCATCTCAAATGCATATGTGATTGAGTTGTGTGTGATTTTTGGCAACATACTGCGTTTCTAGATTAATCATATGTATATAGTTCAAGGAAACTGACATGATTTTCTTTTTTTGCTGATAGATTTGGCAGAGGGAGGCAGCAAGCTTGAGGCAGCAACTGCACAACTTGCAAGAAAGCCACAAGTAATCATCTAATGATTCTGCAATGGAAATAGATCATACATTAATATAAAATTCATCAAGAAAGTAGTTTATCAACAATTTAAATGCCACATGGAATTGTATAAGAACCACCAAAAGATGCTTAAATACTTGAAGGAAAACTTTAGGAATATAATCAGAATATTCACTGTCAGATTTATCAAGAAAGTAGTTTATCAACAATTTAAATGTCACATGGAATTGTATAAGAACCACCAAAAGATGCTTAAATACTTGAAGGAAAATTTTAGGAATATAATTAGAATATTCACTGTCAGATTTATTTTAATAGTATTCCTAAGTTTCTTTAACAAATAAGTTTGGCCTGTCTCAAACCATGTCGACAGAAGAGAGCTGTAGTGGCATATAGATTGGGACTTCTTGAACTGCTGAGATTACTCTTTTGCATGGTTGTAGGCAACTGATGGGTGAGGAGCTTTCTGGCCTAGGTGTTAGAGACCTACAAGGTTTAGAGAATAGGCTTGAAATAAGTCTACGTAATATCAGAATGAGAAAGGTTATATTCCTTGTGCTCTTCAATATCCGTATTTTTGCTTTTGATTTGCTATAGGCTAATGATGATACAGTAAACACCTATCAAACAGGACAATCTTTTGAAAAGTGAAATCGAGGAGTTACATGTGAAGGTTTACCCCTTGCACTTAATGTCATTTCATTATTTCAATGCAAAAGAACATGCATGGAATATTGTGAATTTTGTGTACTAAATATTAACTTTACTTCAGGGAAGCCTAATTCACCAGGAAAACATCGAACTTTCTAGAAGCCTAAATGTCATGTCGCAACAAAAATTGGAACTGTATAACAAGGTTCGATGCAAAATTCTCTTAGAAACTTGTGACTACATGTTAACGCATTATCCCAAGCAACTAAAGGAACAACTTGATTTCAGCTTCAGGCCTGTGAACAGAGAGGTGCCACAGATGCAAATGAAAGTTCCAGCACTCCATACAGCTTTCGTATCATACAAAATGCTAATATGCCTCCTAGTCTTGAATTGAGCCAATCACAGCAAAGAGAAGGGGAGTGCAGCAAAACAGCTGCTCCAGAACTGGGGTAAGTATTTCTTATCTAGAATACATAAATTGCATTACTCAAAGAAGGGGAAGCTCAATCAAGCACGTATGTTTTCATATGTAGCAGACTTCATCTGCCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008983