BGIOSGA008993

From RiceWiki
Revision as of 03:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA008993| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA008993, complete gene.| tag = OsI_088...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA008993

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008993, complete gene.

LocusTag

OsI_08827

Ensembl Transcript ID

BGIOSGA008993-TA

Ensembl Protein ID

BGIOSGA008993-PA

Length

2848

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32573077..32575924

Sequence Coding Region

32573077..32573769,32575198..32575312,32575407..32575924

Genome Context

<gbrowseImage1> name=IndicaChromosome02:32573077..32575924 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:32573077..32575924 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTCACGGCGACGCTGATGTCGTGGGGGCTGATCGACTTCGGGCGGAGCTTCGGGCCGCACAAGGAGGAGGCGAGGAAGGCGGTGCGGTGGGCGACGGACTACCTGATGAAGGCGACGGCGAAGCCCAACACCGTGTACGTGCAGGTCGGCGACGCCTTCCGCGACCACTCGTGCTGGGAGCGCCCCGAGGACATGGACACGCCCCGCACCGTCTACAAGGTCGACCCCTCCCACCCCGGCTCCGACGTCGCCGCCGAGACCGCCGCCGCCCTCGCCGCCGGCTCCATCGTCTTCCGCGACGCCGACCCCGCCTACTCCAAGCGCCTCCTCGACCGCGCCATCGCCGTAAGTACACCAGTGCGCGCCACCGCGGCAGCATTGATTTCGATTGTTTTCCTCATGTCCACGTTATCTGCTTCGTGTACTCCTAGGTGTTCGAGTTCGCGGACAAGTACCGGGGGCCCCTACAGCACAAGCCTCCACGACGCGGTGCGCCCCTGCTACTGCGACTTCTCCGGGTACAAGGACGAGCTGCTCTGGGGCGCGGCGTGGCTGCACAAGGCGTCGCGCCGCCGCGAGTACCGCGAGTACATCAAGAAGAACGAGGTGGTGCTCGGCGCCAGCGAGTCCATCAACGAGTTCGGCTGGGACAACAAGCACGCCGGCATCAACGTCCTCATCTCCAAGGAGGTTCTGATGGGGAAGGACGAGTACTTCCAGTCGTTCCGTGTCAACGCCGACAACTTCATGTGCAGCCTCCTCCCGGGCATCTCTAATCACCCCCAGATCCAGTACTCCCCAGGTGGGCTGCTGTTCAAGGTTGGGGGCAGCAACATGCAGCACGTGACATCGCTGTCGTTCCTGCTGCTCGCCTACTCCAACTACCTGAGCCACGCCGGCGCGCGGGTGTCGTGCGGCGCGGGCGGCTCGGCGTCGCCGACGCAGCTCCGCCGCGTGGCCAAGCGCCAGGTGGACTACATCCTCGGCGACAACCCGCTGCGGATGTCGTACATGGTTGGCTACGGCGCCAGGTTCCCGCGGCGGATCCACCACCGCGGGAGCTCCCTCCCGTCCGTCGCCGCGCACCCGGCGCGGATCGGGTGCAAGGGCGGCGCCGCCTACTACGCCAGCGCGGCGCCCAACCCCAACCTGCTGGTGGGCGCCGTCGTGGGCGGGCCCAGCGACGCCACGGACGCGTTCCCCGACGCGCGCGCCGTGTTCCAGCAGTCGGAGCCCACCACGTACATCAACGCGCCGCTCATGGGCCTCCTCGCCTACTTCTCCGCCCACCCAAACCCAGCCGAGTGGGCCGACGACTAG</cdnaseq>

Protein Sequence

<aaseq>MAFTATLMSWGLIDFGRSFGPHKEEARKAVRWATDYLMKATAKPNTVYVQVGDAFRDHSCWERPEDMDTPRTVYKVDPSHPGSDVAAETAAALAAGSIVFRDADPAYSKRLLDRAIAVSTPVRATAAALISIVFLMSTLSASCTPRCSSSRTSTGGPYSTSLHDAVRPCYCDFSGYKDELLWGAAWLHKASRRREYREYIKKNEVVLGASESINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCSLLPGISNHPQIQYSPGGLLFKVGGSNMQHVTSLSFLLLAYSNYLSHAGARVSCGAGGSASPTQLRRVAKRQVDYILGDNPLRMSYMVGYGARFPRRIHHRGSSLPSVAAHPARIGCKGGAAYYASAAPNPNLLVGAVVGGPSDATDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPNPAEWADD</aaseq>

Gene Sequence

<dnaseqindica>1..693#2122..2236#2331..2848#ATGGCGTTCACGGCGACGCTGATGTCGTGGGGGCTGATCGACTTCGGGCGGAGCTTCGGGCCGCACAAGGAGGAGGCGAGGAAGGCGGTGCGGTGGGCGACGGACTACCTGATGAAGGCGACGGCGAAGCCCAACACCGTGTACGTGCAGGTCGGCGACGCCTTCCGCGACCACTCGTGCTGGGAGCGCCCCGAGGACATGGACACGCCCCGCACCGTCTACAAGGTCGACCCCTCCCACCCCGGCTCCGACGTCGCCGCCGAGACCGCCGCCGCCCTCGCCGCCGGCTCCATCGTCTTCCGCGACGCCGACCCCGCCTACTCCAAGCGCCTCCTCGACCGCGCCATCGCCGTAAGTACACCAGTGCGCGCCACCGCGGCAGCATTGATTTCGATTGTTTTCCTCATGTCCACGTTATCTGCTTCGTGTACTCCTAGGTGTTCGAGTTCGCGGACAAGTACCGGGGGCCCCTACAGCACAAGCCTCCACGACGCGGTGCGCCCCTGCTACTGCGACTTCTCCGGGTACAAGGACGAGCTGCTCTGGGGCGCGGCGTGGCTGCACAAGGCGTCGCGCCGCCGCGAGTACCGCGAGTACATCAAGAAGAACGAGGTGGTGCTCGGCGCCAGCGAGTCCATCAACGAGTTCGGCTGGGACAACAAGCACGCCGGCATCAACGTCCTCATCTCCAAGGTAAATGCACCATTCCTCCATGATTTTACTACTGTGTGCCGATGCTGACGCGCTTTTCAAAGAAGCCTCGTCATTTTTGGCAGCTTCATTATGCCTTCGTCTTTCACAAAGAGTTGCCCAAACCGCAAGTTATCCGGTAGTACTCTTGAAACCTCTTTTCACTGTTAATAATAAAGATCTACTAATGACTGCATAACTGACTGCGTACGGAATTGAACCTTTTAAGTTTTAACCCTTTTGGCTTTACATGTGGGCTCAATCAGGTTTGTTCTGAACTTCTGATGCTTGTCTTTGAATACTCAGAGTCAAAGTAAGCCAGTACACCCTGACGCCCGTGACAGGAGAACTGATATACGTACTCCGTAATACTATACTGCTAGTAATAGCGTACTTTGACTAGCAGCCTAATCCATCGTACTCCTCCCGTTCCATAATATAAGTCATGCATGTATATAAGCAATTAACTATGACTCATTCTCTATTAATTATTTTTTAATCCTCTCTCATGTTCTCTAATTCTAAGAGCACCCGTAATGGTAAAGTAAGGTGCTCTCTATAAAACATGTATATCTCAGCAATAGACTAGATTAATAATAAACCATCTTAATAGTATGTCTACATAGGTATCTATACCTCTCTCATGCATTGCCTTATTTTTCTCTATAAATTATCTCTAGCTTTGCTCTCTCTATTCATTTAATATCTTCCAAGTAGGAAAATATGCTGACATGGATCTCTTGTAGAGAGCTTATAGATAACCATTATGGGTGCTCTAATGGATACATGCAATGTATTTATTAGGATGATCTAAACTAAAATATGATAATAATTAATTTTTGGTATTTGGGTTAAGGGTGGTTATGCCTTAGAGCAAGTATAATAATGAGCTATAAGCCTACTATAAGCTTAGATGGATAAGAGAGATACTGAAAAATCAAAGTTGTGGGCTCTTATGCAAGAGCTAGCTTATCACAAGATCCAAGACAAATTAAATGTATAAGTGAGAGATAGAGAGAAGAGAAGAAAAATATAGCCAATTTTATAGCTAATCTATTATATATATTGGCTTTAAGATGAGTTAACAGTAGGAACTAAGCTAGTATACTGCTATTATATTTTGGAATGAAGGGAGTAGTATAGTAGTAGTGTACGACTACTGTATGAGCATGCTTGTCCGTTGCACTGCACTCCTCCTATGATAGCCTCCTAGGTCCTTGTGCTCCGGTTGCTGCCCGTGCTGCAGTCTACTGTAGAAGTAGCAGGGAAGAACGCTTTTCAGTGCTCACGGTCACGGGTCGATCGATTCTCTCGTGCAATGTCCAAAACACCCTGAGTTCTAGCCTTCTAGGGGCCAGTACTACAAACAACTGTACTACCAGTAGGAGTATTACTGTACTGCTTACGTTAATTAATCTTGCGTTACTCCAGGAGGTTCTGATGGGGAAGGACGAGTACTTCCAGTCGTTCCGTGTCAACGCCGACAACTTCATGTGCAGCCTCCTCCCGGGCATCTCTAATCACCCCCAGATCCAGTACTCCCCAGGTTAATCAATCTCTCTATCACCATCTCTCTCTCTCTCTCTCTTCTCAGCTAGAACCGCAGCTCTTAAATTTGTTGTGTTGGCATTGCAATGCAGGTGGGCTGCTGTTCAAGGTTGGGGGCAGCAACATGCAGCACGTGACATCGCTGTCGTTCCTGCTGCTCGCCTACTCCAACTACCTGAGCCACGCCGGCGCGCGGGTGTCGTGCGGCGCGGGCGGCTCGGCGTCGCCGACGCAGCTCCGCCGCGTGGCCAAGCGCCAGGTGGACTACATCCTCGGCGACAACCCGCTGCGGATGTCGTACATGGTTGGCTACGGCGCCAGGTTCCCGCGGCGGATCCACCACCGCGGGAGCTCCCTCCCGTCCGTCGCCGCGCACCCGGCGCGGATCGGGTGCAAGGGCGGCGCCGCCTACTACGCCAGCGCGGCGCCCAACCCCAACCTGCTGGTGGGCGCCGTCGTGGGCGGGCCCAGCGACGCCACGGACGCGTTCCCCGACGCGCGCGCCGTGTTCCAGCAGTCGGAGCCCACCACGTACATCAACGCGCCGCTCATGGGCCTCCTCGCCTACTTCTCCGCCCACCCAAACCCAGCCGAGTGGGCCGACGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008993