BGIOSGA009003

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Revision as of 03:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009003| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009003, complete gene.| tag = P0487D0...")
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Gene Name

BGIOSGA009003

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009003, complete gene.

LocusTag

P0487D09.7

Ensembl Transcript ID

BGIOSGA009003-TA

Ensembl Protein ID

BGIOSGA009003-PA

Length

3300

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32652582..32655881

Sequence Coding Region

32652582..32653526,32653617..32653768,32655632..32655881

Genome Context

<gbrowseImage1> name=IndicaChromosome02:32652582..32655881 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:32652582..32655881 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAATTACTTGAAGAACTCGCGCTCCGTCCTCTCCAGGCTCCTCCGCCACAAGCCCACCGGCTGCCCGCGGCTGCCACCGTCGCCGCCGTTGCCGCAGGCGCCTCCCCCTGGGTACTACTTCACCTCCCTTAGTCGCCCGGAGGCCGTCCGCTTCGGCCGAGTGCTCCTCCGAAGCCCGCCGCCGCCGCCGCGGCCTGCGCAGGCGCCGCCGTCTCGGTACTTCTACACCTCCCCGCAGCGGCAGAAGGTAGTCCACTTCAACCGCCGGCGCGGGTCCCGGTGGTACCACGACCCGCGGAAGCTCACTACGGTGGTCGTCGTCTCGGGCGGCGCCGCGGCGGCCGTCTACTTCGGCAACCTCGAGACCGTGCCTTACACCAATCGCACCCACCTCATCCTCCTCTCGCCCCCGCTCGAGCGCCAGCTCGGGGAGTCCCAGTTCAACAATCTCAAGAAGGAGCTGGGCCCCAAGATCCTCCCCCCGCTACACCCCGACAGCATCCGCGTTCGCCTCATCGCCTCGGAGGTCGTCCGCGCCGTCCACCGCGGCCTCGCTGGAAGGCACCACGACGCCTTCGCCGCGGATGACGCCTCCTACGGCGACATCTCCACCGACGTCGTCATCAAGAACCACGAGGCCGGCGCGGAAGACGTGATGCTCGGCCGGTCCCGTGGCAACAAGAACGCGAGCGTGGCTGCCGCGGCCCAGCGAGACGAGGAGGTTCTGGATGACAGATGGGTCACCGAGAGCCGCGACCGTGGGAAGGCACGGGGAGCACAGCCGGAGACGAGGCATCTTGATGGGCTCAATTGGGAGGTGATCGTTGTCAGAGATGACCTCATCAATGCAATGTGCTTGCCCGGTGGCAAGATTGTAGTCTTTACTGGACTGCTCAACCATTTCAAGACTGATGCTGAGATTGCTACTGTGCTTGGGCACGAGGTTGGGCATGCTATTGCAAGGCACGCTGCTGAGATGATTACGAAGAACTTGTGGTTTTGGATCCTGCAGATTGTGATCATGCAGTTCATTTACATGCCAGACATGATTAATGCAATGTCGACGCTACTCCTGAAGCTTCCCTTCTCACGGAGGATGGAGATAGAGGCAGATCATATTGGGCTGCTGGTACTTGGTGCTGCTGGTTACGATCCACGCGTAGCTCCCTCAGTCTACGAGAAACTAGGAAAGATCGCAGGAGATTCAACGTTGAGTAATTACCTCTCCACTCATCCTTCGAGTAAGAAAAGAGCACAGCTTTTGAGGCAAGCCAAGGTCATGGATGAAGCACTGAGATTATACAGAGAAGTTAGCTCTGGCCAAGGCACTGAAGGTTTCCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MNYLKNSRSVLSRLLRHKPTGCPRLPPSPPLPQAPPPGYYFTSLSRPEAVRFGRVLLRSPPPPPRPAQAPPSRYFYTSPQRQKVVHFNRRRGSRWYHDPRKLTTVVVVSGGAAAAVYFGNLETVPYTNRTHLILLSPPLERQLGESQFNNLKKELGPKILPPLHPDSIRVRLIASEVVRAVHRGLAGRHHDAFAADDASYGDISTDVVIKNHEAGAEDVMLGRSRGNKNASVAAAAQRDEEVLDDRWVTESRDRGKARGAQPETRHLDGLNWEVIVVRDDLINAMCLPGGKIVVFTGLLNHFKTDAEIATVLGHEVGHAIARHAAEMITKNLWFWILQIVIMQFIYMPDMINAMSTLLLKLPFSRRMEIEADHIGLLVLGAAGYDPRVAPSVYEKLGKIAGDSTLSNYLSTHPSSKKRAQLLRQAKVMDEALRLYREVSSGQGTEGFL</aaseq>

Gene Sequence

<dnaseqindica>1..945#1036..1187#3051..3300#ATGAATTACTTGAAGAACTCGCGCTCCGTCCTCTCCAGGCTCCTCCGCCACAAGCCCACCGGCTGCCCGCGGCTGCCACCGTCGCCGCCGTTGCCGCAGGCGCCTCCCCCTGGGTACTACTTCACCTCCCTTAGTCGCCCGGAGGCCGTCCGCTTCGGCCGAGTGCTCCTCCGAAGCCCGCCGCCGCCGCCGCGGCCTGCGCAGGCGCCGCCGTCTCGGTACTTCTACACCTCCCCGCAGCGGCAGAAGGTAGTCCACTTCAACCGCCGGCGCGGGTCCCGGTGGTACCACGACCCGCGGAAGCTCACTACGGTGGTCGTCGTCTCGGGCGGCGCCGCGGCGGCCGTCTACTTCGGCAACCTCGAGACCGTGCCTTACACCAATCGCACCCACCTCATCCTCCTCTCGCCCCCGCTCGAGCGCCAGCTCGGGGAGTCCCAGTTCAACAATCTCAAGAAGGAGCTGGGCCCCAAGATCCTCCCCCCGCTACACCCCGACAGCATCCGCGTTCGCCTCATCGCCTCGGAGGTCGTCCGCGCCGTCCACCGCGGCCTCGCTGGAAGGCACCACGACGCCTTCGCCGCGGATGACGCCTCCTACGGCGACATCTCCACCGACGTCGTCATCAAGAACCACGAGGCCGGCGCGGAAGACGTGATGCTCGGCCGGTCCCGTGGCAACAAGAACGCGAGCGTGGCTGCCGCGGCCCAGCGAGACGAGGAGGTTCTGGATGACAGATGGGTCACCGAGAGCCGCGACCGTGGGAAGGCACGGGGAGCACAGCCGGAGACGAGGCATCTTGATGGGCTCAATTGGGAGGTGATCGTTGTCAGAGATGACCTCATCAATGCAATGTGCTTGCCCGGTGGCAAGATTGTAGTCTTTACTGGACTGCTCAACCATTTCAAGACTGATGCTGAGATTGCTACTGTGCTTGGGCACGAGGTGGACTTGGGATTTCCGGGTTCATGTGTGATTTTGGTTAGTTGCGGTGGATTGGAGATTTGGAACTGACAGTTGTGCCTTTTGTTGTAGGTTGGGCATGCTATTGCAAGGCACGCTGCTGAGATGATTACGAAGAACTTGTGGTTTTGGATCCTGCAGATTGTGATCATGCAGTTCATTTACATGCCAGACATGATTAATGCAATGTCGACGCTACTCCTGAAGCTTCCCTTCTCACGGAGGTATTCACTTCTTCCTTTTGATGTCTTTCGTGGTGGTTTACAGTCTGCATGTGGTAAGTTGCATTTCATGGGAATGAGATAAGAAGTATTGTTATAAGCTTATAAGCATTTGGGTTCAAGCTCCGACTCCCTAAGTCACATTAAACTAGAGGTCTGGTCAATGAGCTCTCATCTAGGTCAAAGATAGTACTTATATCCTCTGCTAGACCTCAAATAGGTTTGAATCATCATTATCAAAACTGTAATTGTGTTGATTCAGCTAGATAGACTAGTATCAACTGCTACTTGATTAGGCTCATAATTTGAAGATGTATATTCCTGCAATTCAGGGTTTACGTGCTAACAGTAAGTTGTCTTGAAACTAACAGAAATCTTATATTTAAACTAAAAGAACTCCTTCCGCATGAAAGTTGAAGTAGAAAAATGTTTTTATTCGGTCCTTGTCCCAAGCAAGACTTCACAAAAGACATCAAATTCTTTTGTTTCCACACTACTTTTTGGAATGGTAGGTTACAATGTCATGTGTAGCTGCTTCTTTTGTTTTAGAATTAGATAAGATTCAAATAGCACATAGCGTGGATTGTATGACACCTACTCCATAATACCATAAGTTGCTACATGTAACTGTGCAACTATTATAACTCCTTTAGAAAGAAATTATTGTTTACAGTGTACTACACCTTGAATTTTCATTTATCGATTATTGAGAAGATGAGCCAATCTATAGTTGAGACAGTGGTTTTAATAATAAAAGGCATGTTTACGCTGTTGAATTAGGGTAATGTCAGTCACTATGTCAAGTTCATTTTACTCCAGTTCGAAGCATCAGTCAGTTATAATGTTCAATGAGGTGGATTAATATATACAAAAAAGGATAATTGAGTGGTTTTGCAGGAGTAAAATTTGAAACCAATGATTGCCCTTCACATTTATGTAAAATTTGTCGAAACAGCTGTTGCCTACCTTTGGCTGCATAGAACCTTTTGCTTTGCGATGAGCTGTTTTGGAATTCATACCTTCCCTGTTTATTTCATCTGTTACATGTTTAAAAATTGAAAGCATTGGATATGCCAGAATCATTTGAAATTATTTTTTTGGGAGGTGGGGTGGGGGCTTGTTGAGGGGGGCGCAACGCTCTGAACCATATTAAAATGGGACGAGTGTTGCTTCAGTTGAGCAGTACATTATCCCATCACACATCAGTTTACCCTCTCCCCAAATTCTCAATAGTTGCTTTTTGACATGAGCCCCCATCGTTTGGTCAAATATGGATATACGCCATATGGCGTATTAGCAAAATAATAATAATCTGTAGGTTAAGCTTTTATATATATGTTCTTAGCGACTTAAACGTCAATGCTGCAAAATAAACTTCGATGAAAAAACTTCAAAATTGAGTTTTAAAATTTAAATTTTGGCATTGTCTGATGCTGAATAGAGGAAACGGTGGGGGTCATGGCCTAGCCAGCCGAACAAAGCTGTTCCCAGACGTTACCAAGAAGCCACGGAGCATGGCAATCTCACAATAGCACGACATGTACACCATTCGTCTATTAGCAATGGATATTTCGTATTTGTTCATCTTCTGTTGTTAGATTCGTGATGCTATGCCCTTTATTGATTGTTTTAAACATTTTTTGGCCATAATTGTGTATCCGGAACAATTATGGTTGTTTGATCTTGTCATTGTTTTTGTGCATAATTGGAAGTCAGTGGTGAATCATGACTGTCTTTGATATGATGATTGATGAAATTCAACATAATCTCTCAATAAGGATCTTGCCTGAATTTACTTGTGCGTCATGCAGTTGTCAGCGTTGTTATTGTTTGTCTGGATCTCATTCGATGTTGTTACCTATGCAGGATGGAGATAGAGGCAGATCATATTGGGCTGCTGGTACTTGGTGCTGCTGGTTACGATCCACGCGTAGCTCCCTCAGTCTACGAGAAACTAGGAAAGATCGCAGGAGATTCAACGTTGAGTAATTACCTCTCCACTCATCCTTCGAGTAAGAAAAGAGCACAGCTTTTGAGGCAAGCCAAGGTCATGGATGAAGCACTGAGATTATACAGAGAAGTTAGCTCTGGCCAAGGCACTGAAGGTTTCCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009003