BGIOSGA009008

From RiceWiki
Revision as of 03:24, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009008| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009008, complete gene.| tag = OsI_088...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009008

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009008, complete gene.

LocusTag

OsI_08849

Ensembl Transcript ID

BGIOSGA009008-TA

Ensembl Protein ID

BGIOSGA009008-PA

Length

5418

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32711900..32717317

Sequence Coding Region

32711900..32712433,32713244..32714946,32715552..32715702,32716502..32717317

Genome Context

<gbrowseImage1> name=IndicaChromosome02:32711900..32717317 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:32711900..32717317 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTGTCAAGACTTTACAGGTATCAGGGTTTGCTCTAGATGACAGTGCTGATTACGTCAAGGATTTGTTGGAGCGAATTGTTGGCTGTGGGAATGTGTATGCAGTAAAGCTCAGGCATCCAAAGAACGTCACTGCTACCTCAAGAGCATATGCTATAGTTCAGTTTCAGACCGAGGAACATGCTTCACTTGTAAAAAATGCGGCTCAAAGAAAGATACTCCGCCGTGGGCATTATTATCTGAAAGTCCATCCTTCAGATCGTGACATTGTTCCAAGACCAAGAGTTTCAATGTTCAAGCTAGAGGATGTAACACTGCATTTTGGTTGCCTGCTTAAGGAAACAATTTTATCTGCTCTGTGGAGTCGAACAGGAGTTTCTGTTGAGTTTGGTTTCAATCTGAAAAAGATTTACTTTTACCTGCAGCTACCCAACAGCTCAATCGAATATAAACTTGAACTTTCCTATGAGAGCATATGGGAGATCCAGCTTCAACGCCCACCCAAGTCACAAACGAAGTTTCTTTTGATCCAGGTTCAAGCTGCACCTAAGATTTATGAACAGACACCACGCCGTTCTGGTGTTATGTACGAAGATCCATTATTCAACTATTTTAGGGATCATACAGATGATCAATGGACCAGGACAACGGATTTTACTTCATCTTCTAGCATTGGGCAATCATATATTTTATGTCTTGAGGTACCACGTCGATGTGATCTCCCAAACATTCGTGACTACTTCTTTTACTATCATGAGTACAATCATGACTTCGAGTGCCGGAGTGGGGGGTATCCATATTCAAGTGATACTCGCTTTGTTCCGATTGTGAAATCTCGTGGTTATGTCCCCTATGAGATACTCTTCAAGATCAACCATTTGGTTCAGAATGGGACACTTAGCGGACCGACAGTTGATGACAGCTTCTTTCGTCTGGTCAGCCCAGCTTTTGTACCTATTGACCATATAAAGCGTGCACTTGAAATGATGTCATATTTGAAAAAGACCTGCTTGAATCCAACAAGTTGGCTATCTGAACAATACTCAAAATTCCGGAGATCACGCTACGTCCAACCATCACCTAACATATCTCTGGATGATGGATTGGTTTATGTCTACAGGGTGCAAGTTACACCTGCTAAAGTGTATTTTTATGGACCTGAGATTAATGTCTCCAATCGTGTGGTGCGGAATTTTTCTTCTGACATAGAGAATTTCCTTCGCATTTCATTTGTTGACGAGGACTGCGAGAAGCTCCGTGCAACTGATTTATCCCCCCGTTCTGCTTCAGGACATGATGCAAACAGAACTGCTCTGTATAAGAGAGTTCTGTTAGTCCTTTCAGATGGCATCACTATTGGTGGCAAGAACTTTGAGTTTCTTGCTTTTTCTTCAAGCCAGCTCCGAGATAACTCTGCATGGATGTTTGCTTCTCGCCAGGGATTAGCTGCTAGCGACATTAGGACATGGATGGGGGATTTCCGTAACATCAGAAATGTAGCAAAATATGCTGCAAGACTTGGTCAGTCTTTTAGTTCCTCAACCGAAACATTAAAGGTTCAGAAGTATGAGGTGGAAGAAATCTCAGATATAAAAAATGGTACACAGCATGTGTTCTCTGATGGGATTGGAAAGATATCATCTGCTTTTGCTAATGAAGTGGCCATGAAGTGCAACCTGAAACGCTTTGCTCCTTCTGCTTTTCAAATAAGGTATGGTGGTTATAAAGGTGTTGTTGCTGTTGACCCTACATCACGCTGGAAGCTTTCCTTAAGAAAAAGCATGCTAAAGTTTCAGTCAGACAATATCACAGTAGATGTCCTTGCATACAGCAAGTACCAGCCAGGCTTCCTTAATCGGCAGCTAATTACTCTTCTTTCGACACTTGGAGTTAGAGATAGTGTCTTTGAACAGAAGCAAGAAGAAGCAGTGAATCAGTTGAACAAAATGGTTACTGATCCTCAAGCTGCTATCGAAGCAATTGAACTTATGCCCATGGGAGAAATAACAAATGCAGTTAAAGAGCTGTTGTTGTGTGGCTACCAGCCTGATGATGAACCATATCTTTCTATGCTGCTACAAACTTTTAGGGCATCCAAATTACTAGAGCTGAAAACCAAGTCAAGGATATTAATCCCAAAAGGACGAGCAATGATGGGATGCTTGGATGAAACACGTACGCTGAAGTATGGGCAAGTGTTCATTCGAGCTACTTCGGGTGTAAATGACAATGACAGGCCGCATCCTAATGAGTGTTCAGGGAGTGATCTTGACGGGGACATATATTTTGTTTCTTGGGACCCATCTCTCATTCCGCCTCGTATGGTGACACCTATGGACTATACTCCAGCACCAACAGAAACATTAGACCATGATGTTACAATTGAGGAAGTAGAAGAGTACTTCACAAATTACATAGTCAATGAGAGTTTAGGAATGATTGCCAATGCACATGTAGTATTTGCGGATAAGGAAGACCTCAAGGCAGAGAGTTCACCATGCATTGAGCTGGCCAAGCTCTTCTCCATTGCTGTTGACTTTCCCAAAACTGGAGTGCCAGCCCTGATTCCTCCTGAACTACATGTGAAGGAGTATCCTGATTTCATGGAGAAGCTTGACAAAGTCACCTATGAATCAAAAGGAGTAATCGGGAAGCTCTACAGGGAAATAAAGAAGCACACCCCTCACATAAAGCACTTCACAAGGGAGGTGGCAAGGCGGTCTTATGACACCGATATGATTGTTGATGGCTATGAAGATTACATCACTGAAGCTATGGCATTGAAGGACGAGTACGACTTCAAATTGGGTAATCTTATGGATCACTATGGAATAAAAAGTGAGGCCGAGATAATAAGTGGATGCATTCTTAAGATGGCAAAGAATTTCACAAAGAAAAGCGATGCTGATGCTATCAGATTGGCGGTGAGATCTTTGCGTAAGGAAGCAAGGTCAAGGTTCAGTGAGATGAGCTTAGATGATAATGGGCATGGCCATGATGCCTCCGAAGCCAAGGCATCCGCCTGGTACCATGTCACTTACCACCCTGAATTCTGGGGTTGCTACAATGAAGGATATGAGCGACCACACTTTATCAGCTTTCCATGGTGTATCTATGAGAAGCTTTTGCGCATTAAGCAAAGGAGGAAGTTCGTCAGGAAGATGCAGCCCGAGTTGTTCTCTCTCCACAACTTGAGAATTTGA</cdnaseq>

Protein Sequence

<aaseq>MGVKTLQVSGFALDDSADYVKDLLERIVGCGNVYAVKLRHPKNVTATSRAYAIVQFQTEEHASLVKNAAQRKILRRGHYYLKVHPSDRDIVPRPRVSMFKLEDVTLHFGCLLKETILSALWSRTGVSVEFGFNLKKIYFYLQLPNSSIEYKLELSYESIWEIQLQRPPKSQTKFLLIQVQAAPKIYEQTPRRSGVMYEDPLFNYFRDHTDDQWTRTTDFTSSSSIGQSYILCLEVPRRCDLPNIRDYFFYYHEYNHDFECRSGGYPYSSDTRFVPIVKSRGYVPYEILFKINHLVQNGTLSGPTVDDSFFRLVSPAFVPIDHIKRALEMMSYLKKTCLNPTSWLSEQYSKFRRSRYVQPSPNISLDDGLVYVYRVQVTPAKVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTALYKRVLLVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVAKYAARLGQSFSSSTETLKVQKYEVEEISDIKNGTQHVFSDGIGKISSAFANEVAMKCNLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGFLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELLLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIRATSGVNDNDRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPELHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTPHIKHFTREVARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFPWCIYEKLLRIKQRRKFVRKMQPELFSLHNLRI</aaseq>

Gene Sequence

<dnaseqindica>1..534#1345..3047#3653..3803#4603..5418#ATGGGTGTCAAGACTTTACAGGTATCAGGGTTTGCTCTAGATGACAGTGCTGATTACGTCAAGGATTTGTTGGAGCGAATTGTTGGCTGTGGGAATGTGTATGCAGTAAAGCTCAGGCATCCAAAGAACGTCACTGCTACCTCAAGAGCATATGCTATAGTTCAGTTTCAGACCGAGGAACATGCTTCACTTGTAAAAAATGCGGCTCAAAGAAAGATACTCCGCCGTGGGCATTATTATCTGAAAGTCCATCCTTCAGATCGTGACATTGTTCCAAGACCAAGAGTTTCAATGTTCAAGCTAGAGGATGTAACACTGCATTTTGGTTGCCTGCTTAAGGAAACAATTTTATCTGCTCTGTGGAGTCGAACAGGAGTTTCTGTTGAGTTTGGTTTCAATCTGAAAAAGATTTACTTTTACCTGCAGCTACCCAACAGCTCAATCGAATATAAACTTGAACTTTCCTATGAGAGCATATGGGAGATCCAGCTTCAACGCCCACCCAAGTCACAAACGAAGTTTCTTTTGATCCAGGTATCTTGAGCTCTACAGCACTTGCTGATTTCTTTTCAGTAAATTGTACAATTATTGTATGACCACATGTTCACATTGACTAATCTTGCTGTTGAGATAGTTTCTTTAGTAAATATTAAAGTGGTTCGCCTGTACTGTGTTTTGTTCTGCTATTAAGGCTTGACGAAGAACGGTTTAGTCACAACAGTTCATGGTGATGACTTTTGGAATTTTGGTCAATGGTGATTTTGCTGTTTTCGGAAGGTGAAAGTTACATGGGAGTTCTGTTAGAATGTATGTATCATATGGTCCTTATTTGATATACAAATGGACAATGTTAATGTGTTTAGGAGCTTACTGTGATGGTTTAAAAGAATCATTTGAATTTCTTCTGTTAGTATTCTTGTTCCCCTACCTGCTTTGCTGTGGCTCACAACCTGCACTTTAGCATGGTTGAACGACATTATACTGTTCAATCATAAATTACTGGATAATGAAATTGCATTTCTAATCTTTGTGTTTCTTTAATTCTTCATGCTAATGAATTTATGAGTACTCTCTAACTCGCCTGTCCCTTTCATTTCAAAATATGCGGCAATGAAGTTGTATAAAGATATGCTACTTGAGTATTACTTATCTGGAGTGAAAATATGATCGTGTTCTTATGTAAAAAAAAATATGATCATGCTGAAGCACTGAATTCTTTTATCCAGTATTTTCCTTTATATTTCCACTTCAAAATGTTGATCCACCCCAGTCACCAATTCTAGTTGTTATCTCTTGATTTAAAGTTTAGATAACCTTAAATTTATAAATCGTTTCATGTTTCAGGTTCAAGCTGCACCTAAGATTTATGAACAGACACCACGCCGTTCTGGTGTTATGTACGAAGATCCATTATTCAACTATTTTAGGGATCATACAGATGATCAATGGACCAGGACAACGGATTTTACTTCATCTTCTAGCATTGGGCAATCATATATTTTATGTCTTGAGGTACCACGTCGATGTGATCTCCCAAACATTCGTGACTACTTCTTTTACTATCATGAGTACAATCATGACTTCGAGTGCCGGAGTGGGGGGTATCCATATTCAAGTGATACTCGCTTTGTTCCGATTGTGAAATCTCGTGGTTATGTCCCCTATGAGATACTCTTCAAGATCAACCATTTGGTTCAGAATGGGACACTTAGCGGACCGACAGTTGATGACAGCTTCTTTCGTCTGGTCAGCCCAGCTTTTGTACCTATTGACCATATAAAGCGTGCACTTGAAATGATGTCATATTTGAAAAAGACCTGCTTGAATCCAACAAGTTGGCTATCTGAACAATACTCAAAATTCCGGAGATCACGCTACGTCCAACCATCACCTAACATATCTCTGGATGATGGATTGGTTTATGTCTACAGGGTGCAAGTTACACCTGCTAAAGTGTATTTTTATGGACCTGAGATTAATGTCTCCAATCGTGTGGTGCGGAATTTTTCTTCTGACATAGAGAATTTCCTTCGCATTTCATTTGTTGACGAGGACTGCGAGAAGCTCCGTGCAACTGATTTATCCCCCCGTTCTGCTTCAGGACATGATGCAAACAGAACTGCTCTGTATAAGAGAGTTCTGTTAGTCCTTTCAGATGGCATCACTATTGGTGGCAAGAACTTTGAGTTTCTTGCTTTTTCTTCAAGCCAGCTCCGAGATAACTCTGCATGGATGTTTGCTTCTCGCCAGGGATTAGCTGCTAGCGACATTAGGACATGGATGGGGGATTTCCGTAACATCAGAAATGTAGCAAAATATGCTGCAAGACTTGGTCAGTCTTTTAGTTCCTCAACCGAAACATTAAAGGTTCAGAAGTATGAGGTGGAAGAAATCTCAGATATAAAAAATGGTACACAGCATGTGTTCTCTGATGGGATTGGAAAGATATCATCTGCTTTTGCTAATGAAGTGGCCATGAAGTGCAACCTGAAACGCTTTGCTCCTTCTGCTTTTCAAATAAGGTATGGTGGTTATAAAGGTGTTGTTGCTGTTGACCCTACATCACGCTGGAAGCTTTCCTTAAGAAAAAGCATGCTAAAGTTTCAGTCAGACAATATCACAGTAGATGTCCTTGCATACAGCAAGTACCAGCCAGGCTTCCTTAATCGGCAGCTAATTACTCTTCTTTCGACACTTGGAGTTAGAGATAGTGTCTTTGAACAGAAGCAAGAAGAAGCAGTGAATCAGTTGAACAAAATGGTTACTGATCCTCAAGCTGCTATCGAAGCAATTGAACTTATGCCCATGGGAGAAATAACAAATGCAGTTAAAGAGCTGTTGTTGTGTGGCTACCAGCCTGATGATGAACCATATCTTTCTATGCTGCTACAAACTTTTAGGGCATCCAAATTACTAGAGCTGAAAACCAAGTCAAGGATATTAATCCCAAAAGGACGAGCAATGATGGGATGCTTGGATGAAACACGTACGCTGAAGTATGGGCAAGTGTTCATTCGAGCTACTTCGGGTGTAAATGACAATGACAGGTTCACCGTGACAGGAAAAGTTGTGATTGCCAAAAACCCTTGCCTCCACCCAGGTGATATACGGATTCTCCATGCTGTTGATGTTCCTGTTTTGCACCACATGTTTAACTGTGTCGTCTTTCCACAGCAAGGACCAAGGCAAGTATTACATACTCCTATGTTTTCTAGTAGTATGCTTTTTTCTGCAAAACCCCACTTTTCTGGAAACAAATTCTGTCTGGGTTTCACTTTTTAATGAAACCACATATTCATTGGAGAAGCTTATTCTCCAATTTCATATATTTTAGGTTGAAGAACTTCGTTGTTTGTGAAGCTTAGCCACCTGCGATTTCATGGATATGCGATATTTGATCCTTTTTTTTTCTTGTTAAATTCCCATGCATGCATGTTCTTGTCTGTTCGATTTTGTTATCTACATTTGGTTTTAAATATATGCCACCATTGACTTTGTTAAGTAAAGTGCAAAGAGTACCACTAGATTTGTCATATTTGTCTGTTGTACAAATATTTATAGAGAAGACAAATAGTCAAATGAAATAAAAAGTCAATGGTGCCATATTTAAAACATGAGGCAGTAATTATTTTGAACATGATTGTTTGTGCAGGCCGCATCCTAATGAGTGTTCAGGGAGTGATCTTGACGGGGACATATATTTTGTTTCTTGGGACCCATCTCTCATTCCGCCTCGTATGGTGACACCTATGGACTATACTCCAGCACCAACAGAAACATTAGACCATGATGTTACAATTGAGGTAAGCTCAGTTTTCAACCAGAATTGTCCACTCTTTCTTGCCACTCATGCTAGCAATTTTATTCAATTGTTGGCTGGCTAGTGTTATGCTGTTCTTTGGACTCACGAGTCCAGCTCTTGTATTTTTTAAGATTATCATTTACTCCTATTTTCTGGCCCTGCAAGATTTGGGTATATTTATTTGCAGGAGGAAACAAACTAATCCTAGTGCACAGCATATATGGTTTTTATTCAAAATCCTTCATTTAATAATATTACACATCTATTTCCCTATTTTCTGTAATAAATCTTGAATATTTGTAGGAAGATATGCTGCCTCTTTCTTGTTAGAATATTTAACTTCTAGAGATACGTTTGTAATTGGTGCCTCGTAATGAGGATACTACTGTCAACTGAGATAATTTGTCTTAAGCTAGTTGTTTTTTTTGTTTCCCTGGTTATCTTGTGTAAACACGTACTGTGCTCACTTATAAGAGTAGCAAATTCTGTGTTCTTTTTTTTTTTTAAAAAAAAATGTATTTGGAAACCATGCAGTCTGATTCAAGTCTAGGGGCAGTCTGCATTTGGTTGGACAGTTGCTGTTCAAATTGATAATACTATTATGTTGCCTGTTGGAATAAAATTATTACCAGCTTCATGTTTCTGAATTTGTCTACATAGCAGTCACTTGTTTTTCTTGCAATAAAACAGCATGGAAATCACATAATTAAGAAAATAAATGTCATAAATATATCTTTGTTAGAACTGAGTTTTAGCAAATCTTATACACTGCCCTGTAACTTCATTATTGCACCATGCAGGAAGTAGAAGAGTACTTCACAAATTACATAGTCAATGAGAGTTTAGGAATGATTGCCAATGCACATGTAGTATTTGCGGATAAGGAAGACCTCAAGGCAGAGAGTTCACCATGCATTGAGCTGGCCAAGCTCTTCTCCATTGCTGTTGACTTTCCCAAAACTGGAGTGCCAGCCCTGATTCCTCCTGAACTACATGTGAAGGAGTATCCTGATTTCATGGAGAAGCTTGACAAAGTCACCTATGAATCAAAAGGAGTAATCGGGAAGCTCTACAGGGAAATAAAGAAGCACACCCCTCACATAAAGCACTTCACAAGGGAGGTGGCAAGGCGGTCTTATGACACCGATATGATTGTTGATGGCTATGAAGATTACATCACTGAAGCTATGGCATTGAAGGACGAGTACGACTTCAAATTGGGTAATCTTATGGATCACTATGGAATAAAAAGTGAGGCCGAGATAATAAGTGGATGCATTCTTAAGATGGCAAAGAATTTCACAAAGAAAAGCGATGCTGATGCTATCAGATTGGCGGTGAGATCTTTGCGTAAGGAAGCAAGGTCAAGGTTCAGTGAGATGAGCTTAGATGATAATGGGCATGGCCATGATGCCTCCGAAGCCAAGGCATCCGCCTGGTACCATGTCACTTACCACCCTGAATTCTGGGGTTGCTACAATGAAGGATATGAGCGACCACACTTTATCAGCTTTCCATGGTGTATCTATGAGAAGCTTTTGCGCATTAAGCAAAGGAGGAAGTTCGTCAGGAAGATGCAGCCCGAGTTGTTCTCTCTCCACAACTTGAGAATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009008