Os12g0600400

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Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0600400| Description = Similar to Pyridoxal kinase| Version = NM_001073737.1 GI:115489435 GeneID:4352717| Length = 5254 bp| Definition = O...")
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Gene Name

Os12g0600400

Description

Similar to Pyridoxal kinase

Version

NM_001073737.1 GI:115489435 GeneID:4352717

Length

5254 bp

Definition

Oryza sativa Japonica Group Os12g0600400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25498207..25503460

Sequence Coding Region

25498378..25498458,25498962..25499055,25499139..25499243,25499424..25499507,25499640..25499713
,25500288..25500352,25500602..25500665,25500783..25500848,25501739..25501795
,25502280..25502324,25502449..25502502,25502944..25503084

Expression

GEO Profiles:Os12g0600400

Genome Context

<gbrowseImage1> name=NC_008405:25498207..25503460 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25498207..25503460 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcggccgccggtgctctccgtcgcgcttccctccgacacgggacgcgtgctcagcatccagtcccacaccgtccagggatacgttggcaacaaatcagcagtctttcccctgcaactcctgggctttgatgtggatccgataaactcggtacagttttctaatcatacagggtacccaacatttagaggacaggtcctcaacggcagtcagctgtgggatcttattgaagggctggcggaaaacgatttattgcattatacccatttattaacaggttatattggatctgtttcctttttaactactgtactacaagttgttgacaaattacgatcagtcaatcctgatcttgtatatgtttgtgacccggttctaggtgatgaagggaaactatatgtccctcaggatttaatatctgtttatcaacagaaggttgtcccagttgctacaatgcttacacctaaccaatttgaagttgaactactcactggtttaaggattacctgtgaagaagatggcttgaaagcttgcaatgcgctacatagtgctggaccgcgaaaggtggtaataactagtgcacttattgaagataagctgctcctcattggaagccacaaaaaagcaaaggaacaaccaccagaacaatttaagattgagatacccaagatacctgcatatttcacgggcactggagatttaacaactgcccttctactaggatggagtaataaataccctgataaccttgagagggcggctgaactggcggtatccagtttgcaggcactcctaaggagaactgtggaagactataaaagagctgggtttgacccctccaccagcagcctagagatccgcttgattcaaagccaggatgaaattcgaaggccccagattacatgcaaggctgtgaagtatagctga</cdnaseq>

Protein Sequence

<aaseq>MARPPVLSVALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGF DVDPINSVQFSNHTGYPTFRGQVLNGSQLWDLIEGLAENDLLHYTHLLTGYIGSVSFL TTVLQVVDKLRSVNPDLVYVCDPVLGDEGKLYVPQDLISVYQQKVVPVATMLTPNQFE VELLTGLRITCEEDGLKACNALHSAGPRKVVITSALIEDKLLLIGSHKKAKEQPPEQF KIEIPKIPAYFTGTGDLTTALLLGWSNKYPDNLERAAELAVSSLQALLRRTVEDYKRA GFDPSTSSLEIRLIQSQDEIRRPQITCKAVKYS</aaseq>

Gene Sequence

<dnaseqindica>172..252#756..849#933..1037#1218..1301#1434..1507#2082..2146#2396..2459#2577..2642#3533..3589#4074..4118#4243..4296#4738..4878#ggatgatttgacctctccttcctctccctctgcttcgtccgtcctgtagccattgttgactaggaggaggaggaggaggaggaggaggagggattgattggtgagctcgtgttggtatttttgtttgtttgtagggaggagaggtggttgctgcggcggcggaggacggcgatggcgcggccgccggtgctctccgtcgcgcttccctccgacacgggacgcgtgctcagcatccagtcccacaccgtccaggttccttcttcttccccccctcaatcccaatctgctcttcattcctcattccatggaagcgtatatatatcgagtgggttcgggagcaaatctgaggttcttggagttgtgctccaaagatgtgatgtgctctcaagatgtgtggttttttttttttttggggatgcttttacatgtgcaggtgtttagtttaggcctcttgtgggtgtgttactctggttgtgataatgtatgtgggaaaatgaaggatgtgagtaaaatcgttagcgcttgctaaatcggattgcgcagagcttgcgaccaaggctgctttgtccttctgtgagatgagatgagatgagagttcaggaagcaagttccttgacatagaatacaacttggttgagttgttttggggaattctttagtgtatgatggatttgttttacaagtagtgaattatgttttagtttttcgctttgatatgtatggtctgttgggcctgccttttttttttaatttagggatacgttggcaacaaatcagcagtctttcccctgcaactcctgggctttgatgtggatccgataaactcggtacagttttctaatcatacaggtagaggtgggctgcgcttcgttcaacatcgcacgtgcaatctttgacacacctgaataattccctgttatttcatatcccagggtacccaacatttagaggacaggtcctcaacggcagtcagctgtgggatcttattgaagggctggcggaaaacgatttattgcattatacccatttattaacaggtgaatgacttcttcttcattttacactttcccatcctttgtcaaagaaaaaaaaagctctcctgtttctggtgatgttttcatcacaatggcatgcataccggttagccatctcctttgtactgccaaataaggtttgtgtgttttaacaaaaagtaacatgatgtttatggtattcaggttatattggatctgtttcctttttaactactgtactacaagttgttgacaaattacgatcagtcaatcctgatcttgtatatggtaatcttttctcatctttcattatctattcttctctatggtgttttgtctctaccaaattttatagggcaattgtgtcatagctcaagactgattacgaatgactgatatctgtttgctaatgttctgcagtttgtgacccggttctaggtgatgaagggaaactatatgtccctcaggatttaatatctgtttatcaacagaaggtgatttaatccattcaagtcgctaaatataaaatgctggaaatttcttattgttgggcatttgggcatgtaaaagctgctgattgtaaaaatgaaagctttgactgttttccgacatggtgtgtgagcaacctctataagcaaatcccttcacttgactgaattgctaccttttgttataccacctccatctttatatgtatgatgctggctagttcaaatttgactagccaacgtcacataaaaagaactgagggaatagaatgcaacagttaaagtacatctctttaacaagtgattacactttagaacccctctgagcaaagaggaattggttagtaagttaggaccaagcagcccaagctgtgcaccttgtgttcagaagttggtcttcttagcttgtgttcacttttgctgatctagttatcaagtgaaaaactctaggccagagtctgtcatttcaaatatgttattttatttctcatgattcttaagcatgctctaattcttgcacatgcccccatatatgattacttatcctaatacattcattttgtgatctaatcatccttaggttgtcccagttgctacaatgcttacacctaaccaatttgaagttgaactactcactggtttaaggtagtcatgctcttcttttggtaaaaaagaaaacaagtaattctttgttatgttcatataccacaaaaacttatctagttatcttagcacaattatcacacaaattcttttcagaagcaaagcttgtcaatatgcttactgctgatttggtctgaaaggtccatttttatgggaaaatccagtctcgttctgtgacttctatattatttgtcacctagtaccagggagctaattatttatagtggataggattacctgtgaagaagatggcttgaaagcttgcaatgcgctacatagtgctggaccgcgaaaggtttgacccttatctgattgatagttaaaccaagagaagtattcagtgttttgggtcatatgatccccctgtgcagtcactagtttatttacttgtttgattgtcatgatccttcaggtggtaataactagtgcacttattgaagataagctgctcctcattggaagccacaaaaaagcaaaggtaaacttttaacgtttatgtgatcaacatctttgcacatgctgtcagtgtgctgcaattgaagacggaaaacttactggtctacagttattcagcaaaagttatcttacctaggaagcctaatgggaattgtgagtagaacacaatagatacacttatgctggcaatttatggagacagcaaatcctaaaagcaatcttatttgcatatcttattcgagccctatgtctcttgcaatgctatttatgttctctactgggagctgctggccagttcatgcggcaggatgtctcagggatgtgatttatcatatatacatgtactcatgaatagttgtcaactaggttaggtacacagtattgaactattgtcaggttgatgtgtaaaccaggttccttgccaaagtacaaaagttggaaaatttttgaaatccccttgtttcttaccagaatatccagttttcagcttttaaaaccctcatcatggaatgagatacgtttaatcatgggacagcagaggtttatctgttccaggcgttcagtcctgctagctatttagtggtgacaaagctattatctatctggtagaggttcctcatcaaggtgtcttgtaacacagaaaaacaaattcagaaaaccataattcgttcataaatgattaccagttattcatatttcccaattacaacaaaatgcaacaggatagggataaaagaaatggcaccagctatttccattgagaatgctgtcaacacctgatgatatatgattcagttttagtacaatttatgttttatttgtgtaattggtgcattggaatgattttaagttgaatccatattattgttccagtttgttcttcatatggcaatttattgtcttgattttcaggaacaaccaccagaacaatttaagattgagatacccaagatacctgcatatttcacggtatgcactcaactgtggtgacagagggatcctttctaatattgacgtaattttccatgctctttttttgtggtttcatagtcaacatctaggtcactgtgtaggtaacagattgccatagctgatcttgatatcagggtgtgggcaaagccgtagtgttgaagaataaccctacataatatctataaacgctgcacaaccaaaaagtgctctaatatgaagaaaagcatatttcttgtctcaaggttagacacaaactaggctaggttttcttttcctttttagactgtgtttgtgaagttttaagtgacataagtggatcaaggggtggttgagaaaaggagtaagcaaggaacttttctttgttacctttgaacaaatacttctgtgccagcttggtcttgatagcattgctatcagtaactacttcatcgagtactttcatgttgcataaattttatcctgaattcgtaatgctttgcagggcactggagatttaacaactgcccttctactaggatggagtaatgtaggtcccagatgaactttaccatttttttctcgaaagcagatgaagtttaccattgctcttatagaattttcttgtcattttaaaaccacttctaagttctctttgcttttgatttgtacagaaataccctgataaccttgagagggcggctgaactggcggtatccagtttgcaggtatctcagttgtgctgctatttaatacttaagatcgctcatgtgttttgcatgcctagcttagcagcatggtgtattcgcaatcctgtttcctggtttatgtgcttcatgtaattagagctatgacaggaatttgaaatcacaggctggacccagttcgtaatggtcagttattgattgacatcagcagctacctgtttgtagccaaccctctttcttctatataacatcgaccatgtttaaatccggttcagtttaggtgttattctaagctcaaacatgttctgtagaaggctttcttttctatacaatgcaaatgacaagtcagccattaaggcctaggataagtttgctttcgaagtattaggtgcaagacaattcagattcgaagtttactcgcattatcctagaagctttgatatgtacagaaattttctgcaggcactcctaaggagaactgtggaagactataaaagagctgggtttgacccctccaccagcagcctagagatccgcttgattcaaagccaggatgaaattcgaaggccccagattacatgcaaggctgtgaagtatagctgaaaccatatcacaaccatggcaagcatcatcaaacatcaattagtgaatagtgactggagggagagtaccagtgttaaaaacaattttggtattctgcttgtatgcacaatattcatcaacatgcttcctggcttcaactctggggataccattttagttgatcatagtttcaaaacaagaaagggtctgatttcaaaaacaaaataatacacatgctgccttctctctctctctctctctctctctctctctttaatctcctttacaatttgtcatgtttttgtgcctatgagactgatattgtacaagggatagctccatcttggaaagctttattttgtgtaaaatctacaatgaataaacggcagttccgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0600400, RefSeq:Os12g0600400