BGIOSGA009028

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Revision as of 03:25, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009028| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009028, complete gene.| tag = P0516G1...")
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Gene Name

BGIOSGA009028

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009028, complete gene.

LocusTag

P0516G10.26

Ensembl Transcript ID

BGIOSGA009028-TA

Ensembl Protein ID

BGIOSGA009028-PA

Length

4455

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33005174..33009628

Sequence Coding Region

33005174..33005337,33006262..33006304,33006405..33006470,33006566..33006627,33006784..33006883
,33006983..33007165,33007646..33007694,33007782..33007961,33008087..33008207
,33008305..33008386,33008476..33008561,33008704..33008804,33008937..33009078
,33009179..33009329,33009401..33009628

Genome Context

<gbrowseImage1> name=IndicaChromosome02:33005174..33009628 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:33005174..33009628 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGATCTCCTCCCCGGCCGCGCCGCCCAGTGCCGGCGCGGCTCGTCGCCGCTGCGGTCCTCCTCTCGGCTCTCGCCGGGGGAGCCGCGGCGGGCGCCGCCATCGCCGGCGATGGGTACGGGCGCGGCAGGAGGCTGTACATGAGGAACAAGGTCCTGGAGATGTTTTACCATGCTTATGACAACTATATGACTTATGCATTTCCACATGATGAATTGAAGCCTCTAACCAAAAGTTTCACTGACTCCCTTAGTGAGCTTGGCAACCTAAATCTTGAACATTTGCCAAATGATTACAATGGATCTGCACTTACACTAGTCGAATCGTTGTCAAGTCTTGTTGTCTTAGGTAACCTCACGGAGTTTGAAAGAGGAGTTCTCTGGCTTTCAGAGAACCTAACATTTGATGTTGATGCTCGCATAAATCTTTTTGAGTGCAACATAAGACTTCTTGGGGGGCTTATTTCTGGTCATATTCTTGCAAAGGAGCACAGCAGTCATCTTAAAGATGGACCATATCAGGACCAGTTACTACATCTTGCTGAAAATTTAGGAAGTCGTTTTCTACCAGCTTTTGAGACACCTACTGGATTGCCATACGCATGGATCAATCTTAAGTATGGAGTGATGGAAAATGAAACAACTGAGACAAGCACATCAGGGTGTGGTTCTCTGATTCTTGAAATGGGTGCATTATCACGTTTGACGGGTGATTCTAGATATGAGGCTGCAGCTCTTCGTGCTCTTCGTAAGTTGTGGAGCATGAGAAGTTCGCTAAATCTTGTAGGCACAACCCTTGATGTCTTGACTGGCAAGTGGATTGAATATTCGTCAGGCATTGGTGCTGGAGTTGATTCATTTTATGAGTATTTGATTAAAGCGTATGTTCTTTTCGGAAGCGAAGAATACTGGGATATGTTTCATTCAGCTTACCTTGCAGTGCAGAAGTATTTCCGACATGGCCCATGGTATCATGAGGCTGATATGAGGACCGGAGAAGCAACACACTGGCAACTAACTAGCCTTCAAGCCTTCTGGCCAGGTCTTCAGACACTTCTAGGAGATGTTGCTGCTGCAAATATATCACATCGTGAATTTTACAATGTATGGCAAAGGTTTGGTGTTCTGCCGGAAAGATATCTTTTGGACTTCGGAATGTTGCATCCTACAGAGAAGTATTATCCTTTACGTCCAGAGTTTGCTGAGTCTACATTTTATCTTTATCAAGCAACTAAAGATCCTTGGTATCTAGAAGTTGGTGAAGCTATCATTGGATCCCTTAATTACTATACTAAAGTGGATGGAGGTTTTGCTAGTGTCAGGGATGTTTCGACAATGAAACTTGAAGATCATCAACATAGCTTCTTTCTTTCAGAAACCTGCAAATATCTTTTTCTTCTCTACGATGATTCATTCTTGAGGAACCAAAATTACATATTTACCACGGAGGGTCACCCCCTTCCAATAAGGAGCACATGGCACGAGATAATCCCGACAACGCATGTTCCCAGCAACTGGACATTCGTTAAGGATGACAGCCAACCCTTCCGTGTGAGCGCATTGTCGTCTCAAGTTTGTCCAGAAACGATTTTCCGGCAAAGCGTTGGCTCCCCGTGGGAGAGTGCATGCCATGTACCAGACGTGTTACCTACCCACAGATGCAGGACCGATGATGACTGTGGAGTGGAGGCCGTATCATGCAGGAGAAGAACTTGCAGTATGGCTGGCTACTGCGGCTTGTGGCTGGGGGTTTATTAG</cdnaseq>

Protein Sequence

<aaseq>MRSPPRPRRPVPARLVAAAVLLSALAGGAAAGAAIAGDGYGRGRRLYMRNKVLEMFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLNLEHLPNDYNGSALTLVESLSSLVVLGNLTEFERGVLWLSENLTFDVDARINLFECNIRLLGGLISGHILAKEHSSHLKDGPYQDQLLHLAENLGSRFLPAFETPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGALSRLTGDSRYEAAALRALRKLWSMRSSLNLVGTTLDVLTGKWIEYSSGIGAGVDSFYEYLIKAYVLFGSEEYWDMFHSAYLAVQKYFRHGPWYHEADMRTGEATHWQLTSLQAFWPGLQTLLGDVAAANISHREFYNVWQRFGVLPERYLLDFGMLHPTEKYYPLRPEFAESTFYLYQATKDPWYLEVGEAIIGSLNYYTKVDGGFASVRDVSTMKLEDHQHSFFLSETCKYLFLLYDDSFLRNQNYIFTTEGHPLPIRSTWHEIIPTTHVPSNWTFVKDDSQPFRVSALSSQVCPETIFRQSVGSPWESACHVPDVLPTHRCRTDDDCGVEAVSCRRRTCSMAGYCGLWLGVY</aaseq>

Gene Sequence

<dnaseqindica>1..164#1089..1131#1232..1297#1393..1454#1611..1710#1810..1992#2473..2521#2609..2788#2914..3034#3132..3213#3303..3388#3531..3631#3764..3905#4006..4156#4228..4455#ATGCGATCTCCTCCCCGGCCGCGCCGCCCAGTGCCGGCGCGGCTCGTCGCCGCTGCGGTCCTCCTCTCGGCTCTCGCCGGGGGAGCCGCGGCGGGCGCCGCCATCGCCGGCGATGGGTACGGGCGCGGCAGGAGGCTGTACATGAGGAACAAGGTCCTGGAGATGTGAGTGTGCTCGACATGCCATAAGCTACATGCTCAGATGCTCTCTTGACTTTTCTCTCTTTCGTTGCGCGGTCGATTGGTTAGATTTTTTTTTTCTTTTTGGTTGTGGCTACATCGCGGAGAACGAAGACATCTCCGCACTTTTGTTAAGCCTCGTCTCCACTTGTTCGCGAGGTCTACGATAAATTCGTCGTAAATTTAGTTGAAAGGATGCAAAGCTTTGTTCAATGTGTTGAGACGAATGCCCCCACTTCGAACTTAAGCCTGTAATTGTAAAGAAGGCACGGGTTTGCTATAGAAGGATTGAGAATGGGGTTTTTGATTGGATAATGTGTGTGTGCCCAAGTTGTTAAGTATTAAAAAGTTTCATGTTATAAAACAATTATGAGAAAGTTGTCATCTCGAGTTACCAAGGATTGCTTTGGTTGGTGTATTGTTTATCTGATGTTATCTCGAGTTACCAAGGTATTTCCTGAACCTTTTATCAACAAATCACTGCATTAACTCTGTAAAATAGGGAAATGCTGAAAATCTAGTCTAACTTTGCATTTACAAGGCAGAGTATAGTTGCCCTGACTGTCCAACAGGGAAAACAAAATTGCTCCTAGGAGCATTGGCGTTATTTATGATGCTTAAGTTATTCTATTATATTTGGTGTCTCAAACTGAGACGGTTTGAACCATGCATGCGCCTCACCAAAGTGTTCAGCCTGAATGCTCTGCATATGAAGGTTAGCACAAAATAATGCCAGCATAAAATTTTCTATCCACATACAAAAGCATGCGAAGGTAGGATCTCAGCTCAGTATGATCATACATTAGTATTGTGGCGCTATACTTAGATCACCTAATCCACCATTTGCACATTACTTTGGCGTCTTGCAATGTTTATTTTCTATTACTGATTCACTACCATTCTTTTCAGGTTTTACCATGCTTATGACAACTATATGACTTATGCATTTCCAGTATGTCCATCAGCTATCTTAAGAATTCTCACACAATGTTCAGTTCGATTAAACGCACATGAAATAGTACAAGCTAACATTATTCTCTTTATCTTTTCAGCATGATGAATTGAAGCCTCTAACCAAAAGTTTCACTGACTCCCTTAGTGAGCTTGGCAACCTAAATGTATTAAAGTATCAACAAGTTTGCAAATTTTAATTGAAATTTTAAAAGCTTTGAGATAGCAGGTCATGATGTCATCACTTTGTTCCAACTTGTAGCTTGAACATTTGCCAAATGATTACAATGGATCTGCACTTACACTAGTCGAATCGTTGTCAAGGTACAGTTTACGAAGTTGTAATGTTTTTCACTACTTTGAATTTGGTTCTGTACTTCTGTCTTTGCTGTTCAGAATGTGAATGATGATATAGTTTCTTCAGAAAACACTATTATTCGCAAGGTTGATAGGTAATGCCTCTCTGTTTGGCTCATGCAGTCTTGTTGTCTTAGGTAACCTCACGGAGTTTGAAAGAGGAGTTCTCTGGCTTTCAGAGAACCTAACATTTGATGTTGATGCTCGCATAAATCTTTTTGAGGTAATGCTAGCTGGTTACTACCACAGGTTTTCACCTTAAAATGACATGTTGGCCTCAGGACACTGAGTTACACATGCATTTTCTCTTAATCTTATGCAGTGCAACATAAGACTTCTTGGGGGGCTTATTTCTGGTCATATTCTTGCAAAGGAGCACAGCAGTCATCTTAAAGATGGACCATATCAGGACCAGTTACTACATCTTGCTGAAAATTTAGGAAGTCGTTTTCTACCAGCTTTTGAGACACCTACTGGATTGCCATACGCATGGATCAATCTTAAGGTTCATTTACAAATCCTCTGATCTTGCTATTTCAAAGGTGGTTAATCAGGGTAGGCAATATTAGAATTTTAATACTGGCAAATTTCAGTTTGTATTTTTACGCAAGGCTACTTGAAAACCATCGTAGAAGATATCAGATTGAGAAAGGAACCTTTGGGTTTTGGAGGCAATAGCTCACAGCTCAGCAAACGAAATGCGTTTAGTTTTTACTCCAATTTACAGAAGGAATATTTCTAGCTAAATCAGTGATGCTCATCATGTACAGTATTGATAATAACTACTTTAGAAGAACTAACCAATCAGGATGCTTCAGTTCATGCCAAAAAAGAAATGACTGAATGAGTACGAGTCTTGCAAAGAACATCAGTGTCAAGCTACAACCACGAAATGTTTTCCACAAGTCGTGTATTATAATTTTACTATATTATATGTTATCGAGAGTTTCTTCTAATTCCATGACCATGTAACTATTTTTTCCAGTATGGAGTGATGGAAAATGAAACAACTGAGACAAGCACATCAGGGTGTGGTGGGTGATAGAATGTTCTACTGTATTCCAGGGGAAATGCATTACTCTTAGTTATATCTTACTATTTTGTAATATACATTTTTACAGGTTCTCTGATTCTTGAAATGGGTGCATTATCACGTTTGACGGGTGATTCTAGATATGAGGCTGCAGCTCTTCGTGCTCTTCGTAAGTTGTGGAGCATGAGAAGTTCGCTAAATCTTGTAGGCACAACCCTTGATGTCTTGACTGGCAAGTGGATTGAATATTCGTCAGGCATTGGTGCTGGTACTACTCTTTACATTTTCCCATGTGATTTACTGATCATGTGTTTGTATCCTGCGGTAAGCATCTTGTCACTGCACAACATACTTTTGAGACATAATAATGATTCATTTGTATCATGTTTGCAGGAGTTGATTCATTTTATGAGTATTTGATTAAAGCGTATGTTCTTTTCGGAAGCGAAGAATACTGGGATATGTTTCATTCAGCTTACCTTGCAGTGCAGAAGTATTTCCGACATGGCCCATGGTGCACCCTTTTATTTTTCTTGGCATTTCATCTCAGCTAACTGGCCTGTCACTGTGTTGTGATTGTACCAAGCACTAATGATCATCTGGCATGATAGGTATCATGAGGCTGATATGAGGACCGGAGAAGCAACACACTGGCAACTAACTAGCCTTCAAGCCTTCTGGCCAGGTCTTCAGGTTTGCTGAATTCCATAAATTGATGGACAGTCACCTTATTGCAGGATGTTAATCATGCATTGTTTATCTACTCCTGTGATCATGACCAGACACTTCTAGGAGATGTTGCTGCTGCAAATATATCACATCGTGAATTTTACAATGTATGGCAAAGGTTTGGTGTTCTGCCGGAAAGGTACCATTTACTGTTTTTCCCACATATTAGTACCATCATCTTTAATGGGGGGAAAGACTTATTATTTAAGTGATAAGGCAAAAAGTTGCTTCAAGATTGATACTAAACTGTACTGACACAAGTTTCGGACTGTATTTTGCAGATATCTTTTGGACTTCGGAATGTTGCATCCTACAGAGAAGTATTATCCTTTACGTCCAGAGTTTGCTGAGTCTACATTTTATCTTTATCAAGCAACTAAAGGTTTGCTCAACAAGAAAAGCCAAAATTGCAGCCATTATATCTAGCTAGATTTCCTATACATAGAAGCCATTAGCTCTTCTCCTTTTCTGTTCCCTCATTCTCCTTCCCCAGGCTGACATGCTCTTCCTGTAGATCCTTGGTATCTAGAAGTTGGTGAAGCTATCATTGGATCCCTTAATTACTATACTAAAGTGGATGGAGGTTTTGCTAGTGTCAGGGATGTTTCGACAATGAAACTTGAAGATCATCAACATAGCTTCTTTCTTTCAGAAACGTAAGCTGTTGCTCCCTTCCAATTATTTCTTAAAAGCTGGTACTAAGTATTTAGTCATCACTGGTACTGACGACTGAGTCACATGACAAATTATTTGCAGCTGCAAATATCTTTTTCTTCTCTACGATGATTCATTCTTGAGGAACCAAAATTACATATTTACCACGGAGGGTCACCCCCTTCCAATAAGGAGCACATGGCACGAGATAATCCCGACAACGCATGTTCCCAGCAACTGGACATTCGTTAAGGTAATATCCCAGTTTCTGTTCCCAGTTCCTCCTTACTTGCATGAACAATGATACCAAAAACTTATCTTCAGGATGACAGCCAACCCTTCCGTGTGAGCGCATTGTCGTCTCAAGTTTGTCCAGAAACGATTTTCCGGCAAAGCGTTGGCTCCCCGTGGGAGAGTGCATGCCATGTACCAGACGTGTTACCTACCCACAGATGCAGGACCGATGATGACTGTGGAGTGGAGGCCGTATCATGCAGGAGAAGAACTTGCAGTATGGCTGGCTACTGCGGCTTGTGGCTGGGGGTTTATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009028