Os09g0400500

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Revision as of 07:24, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0400500| Description = Serine/threonine protein kinase domain containing protein| Version = NM_001069650.2 GI:297609426 GeneID:4346994| Len...")
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Gene Name

Os09g0400500

Description

Serine/threonine protein kinase domain containing protein

Version

NM_001069650.2 GI:297609426 GeneID:4346994

Length

2283 bp

Definition

Oryza sativa Japonica Group Os09g0400500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14661589..14663871

Sequence Coding Region

14661685..14663631

Expression

GEO Profiles:Os09g0400500

Genome Context

<gbrowseImage1> name=NC_008402:14661589..14663871 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14661589..14663871 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcgtgcggcggtcggcgtggtcgtcgcgttgttgtggtgcgccgcgctgatcggtggcggcgcgggtgcggggcaggacctcgcggcggacacggcggcgctgcttgcgttccgggacgcggtcggcccgcggctgccgtgggcgtcgtcgtcgtcctcgccgtgcgggtggcgcggcgtccggtgcgacgccggcggtgggcgtgtcgtcgcgctgcagctccccggcgcgaagctggtagggagggtgccgacggggacggtgggaaacctgacggcgctgcggacgctgtcgctgcgctccaacgcgctctccggcgggatcccggtggacatcggcaactgcggggagctccgggcactctacctgcagggaaaccagctcgccggcgaggtgccggaggggttcttctcgcttctgttgctacagcggctcgacctctcgcgcaaccgcatcacggggagcatctcgccggagttcaacaagctccggcggctcgccactctctacttggagaacaacggcctcaatggcaccctccccgccgatcttgatctcccgaagcttcaactcttcaacgtgtccaacaacgaccagctcaccggcgccgtgccggcgtcgctcgccgggaagccggcgagcgccttcagtgggacaggactctgcggtggccctctaagcccgtgtacaaacacttcgccgccatcgccgtcgccgtcgccgtcgccgccgattccgccgcctccggcagcttctcaagatagcaagagcagcaagctctccggtggtgcaatcgccggcatcgctgtcggcgccgcggcggcgttgttggtggcgctcgcggtgatcgtcctcctctgtttcaagcgtgggaggagaaaggaagggagaccagccgacgtcgacgaggacgcgtccccggtgtcggtcacggtggcgaggacggacaaggtcgaagtgaagcggtcgcggtcgcgcccgtcgcagcagacgacgacggcgagcggcgccaagaagctggtgttcgtcggcggcgagccggacgtgccctacgacctggacacgctgctgcacgcgtcggccgaggtgctcgggaagggctggctcggcacgacgtaccgcgccacgctcgagggcggcgccgccgtggtggccgtcaagcggctcagggaggcgcccatcgcggagagggagttccgtgacagcgtggccgagctcgccgcgctccgccacgagaacctcgcgccgctccgcgcctacttctacagcagggacgagaagctcctcgtctcggacttcgtcggcgccggagccctctcctccctcctccacggcggcggcggcgccgtgcgccgcgcgcgcctcggcttcacgtcgcgggcgcgcatcgcgctggcggcggcgcgcggcgtcgcgttcatccacggcgccggctcgtcccacggcaacatcaagtcgtcgaacatcgtcgtcaaccgcacgcacgacggcgcctacgtgaccgaccacggcctcgcccagctcctcggcgccgccgtgccgctgaagcgggtgaccggctaccgcgcgccggaggtgagcgacctgcgcagggcgtcgcgggaggcggacgtgtacagcttcggcgtggtgctcctcgagatgctcacggggaggccgccggcgaacgcggtgccggggttcgacggcgtcgacctgccgcagtgggtgcgcgcggtggtgcatgaggagtggacggccgaggtgttcgacgccagcatcgccgacgaggcgcacgcggaagaggagatgatgcggctgctaaagctcgccgtcgaatgcaccgagcagcggccggagcggcggcccaccatggccgaggtggcggcgaggatcgagcacatcgtcgacaccgtcatccggaacgccgacgtggacgatttcgacagcgtttctcagtag</cdnaseq>

Protein Sequence

<aaseq>MPRAAVGVVVALLWCAALIGGGAGAGQDLAADTAALLAFRDAVG PRLPWASSSSSPCGWRGVRCDAGGGRVVALQLPGAKLVGRVPTGTVGNLTALRTLSLR SNALSGGIPVDIGNCGELRALYLQGNQLAGEVPEGFFSLLLLQRLDLSRNRITGSISP EFNKLRRLATLYLENNGLNGTLPADLDLPKLQLFNVSNNDQLTGAVPASLAGKPASAF SGTGLCGGPLSPCTNTSPPSPSPSPSPPIPPPPAASQDSKSSKLSGGAIAGIAVGAAA ALLVALAVIVLLCFKRGRRKEGRPADVDEDASPVSVTVARTDKVEVKRSRSRPSQQTT TASGAKKLVFVGGEPDVPYDLDTLLHASAEVLGKGWLGTTYRATLEGGAAVVAVKRLR EAPIAEREFRDSVAELAALRHENLAPLRAYFYSRDEKLLVSDFVGAGALSSLLHGGGG AVRRARLGFTSRARIALAAARGVAFIHGAGSSHGNIKSSNIVVNRTHDGAYVTDHGLA QLLGAAVPLKRVTGYRAPEVSDLRRASREADVYSFGVVLLEMLTGRPPANAVPGFDGV DLPQWVRAVVHEEWTAEVFDASIADEAHAEEEMMRLLKLAVECTEQRPERRPTMAEVA ARIEHIVDTVIRNADVDDFDSVSQ</aaseq>

Gene Sequence

<dnaseqindica>241..2187#gtagtatcttctcctcccctgtatactgcaaaacgctcccttccaacgcctcacctccctctcgccgtcgccgtcgccgtcctcctcgttgtcgttgtcgtcgtcttcctttgactccccttataatacaaggagagcgcgcgcccattgcatccatttgcttccatcccccatcccccgcgcctttttagtttggactccgtcgctcgctcgcttgcttcgggcggcggcgaggtgacgatgccgcgtgcggcggtcggcgtggtcgtcgcgttgttgtggtgcgccgcgctgatcggtggcggcgcgggtgcggggcaggacctcgcggcggacacggcggcgctgcttgcgttccgggacgcggtcggcccgcggctgccgtgggcgtcgtcgtcgtcctcgccgtgcgggtggcgcggcgtccggtgcgacgccggcggtgggcgtgtcgtcgcgctgcagctccccggcgcgaagctggtagggagggtgccgacggggacggtgggaaacctgacggcgctgcggacgctgtcgctgcgctccaacgcgctctccggcgggatcccggtggacatcggcaactgcggggagctccgggcactctacctgcagggaaaccagctcgccggcgaggtgccggaggggttcttctcgcttctgttgctacagcggctcgacctctcgcgcaaccgcatcacggggagcatctcgccggagttcaacaagctccggcggctcgccactctctacttggagaacaacggcctcaatggcaccctccccgccgatcttgatctcccgaagcttcaactcttcaacgtgtccaacaacgaccagctcaccggcgccgtgccggcgtcgctcgccgggaagccggcgagcgccttcagtgggacaggactctgcggtggccctctaagcccgtgtacaaacacttcgccgccatcgccgtcgccgtcgccgtcgccgccgattccgccgcctccggcagcttctcaagatagcaagagcagcaagctctccggtggtgcaatcgccggcatcgctgtcggcgccgcggcggcgttgttggtggcgctcgcggtgatcgtcctcctctgtttcaagcgtgggaggagaaaggaagggagaccagccgacgtcgacgaggacgcgtccccggtgtcggtcacggtggcgaggacggacaaggtcgaagtgaagcggtcgcggtcgcgcccgtcgcagcagacgacgacggcgagcggcgccaagaagctggtgttcgtcggcggcgagccggacgtgccctacgacctggacacgctgctgcacgcgtcggccgaggtgctcgggaagggctggctcggcacgacgtaccgcgccacgctcgagggcggcgccgccgtggtggccgtcaagcggctcagggaggcgcccatcgcggagagggagttccgtgacagcgtggccgagctcgccgcgctccgccacgagaacctcgcgccgctccgcgcctacttctacagcagggacgagaagctcctcgtctcggacttcgtcggcgccggagccctctcctccctcctccacggcggcggcggcgccgtgcgccgcgcgcgcctcggcttcacgtcgcgggcgcgcatcgcgctggcggcggcgcgcggcgtcgcgttcatccacggcgccggctcgtcccacggcaacatcaagtcgtcgaacatcgtcgtcaaccgcacgcacgacggcgcctacgtgaccgaccacggcctcgcccagctcctcggcgccgccgtgccgctgaagcgggtgaccggctaccgcgcgccggaggtgagcgacctgcgcagggcgtcgcgggaggcggacgtgtacagcttcggcgtggtgctcctcgagatgctcacggggaggccgccggcgaacgcggtgccggggttcgacggcgtcgacctgccgcagtgggtgcgcgcggtggtgcatgaggagtggacggccgaggtgttcgacgccagcatcgccgacgaggcgcacgcggaagaggagatgatgcggctgctaaagctcgccgtcgaatgcaccgagcagcggccggagcggcggcccaccatggccgaggtggcggcgaggatcgagcacatcgtcgacaccgtcatccggaacgccgacgtggacgatttcgacagcgtttctcagtagtttcagtgacattttctttcttttttttcagttcattggtcccaaaaattgtaaaattcaaaattcttcgtcatgatcatagttcatacctcacag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0400500, RefSeq:Os09g0400500