Os12g0601000

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Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0601000| Description = Conserved hypothetical protein| Version = NM_001073739.2 GI:297613485 GeneID:4352719| Length = 4203 bp| Definition ...")
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Gene Name

Os12g0601000

Description

Conserved hypothetical protein

Version

NM_001073739.2 GI:297613485 GeneID:4352719

Length

4203 bp

Definition

Oryza sativa Japonica Group Os12g0601000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25524514..25528716

Sequence Coding Region

25524514..25525016,25526152..25526253,25526622..25526766,25526849..25527033,25527144..25527248
,25527354..25527451,25527533..25527771,25527877..25527943,25528037..25528122
,25528426..25528524,25528651..25528716

Expression

GEO Profiles:Os12g0601000

Genome Context

<gbrowseImage1> name=NC_008405:25524514..25528716 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25524514..25528716 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcctcctccgacgcttcctccgccctcgccgccgccgccgcggtggggaagaagcgtggcagctacaactgcggcaggtgcgggctccccaagaaggggcacgtctgcgccgtcgccggggaggagcagaagccgccgaggagggcgctgcacttcgacgaggcggccccgccgccgccgccggagaagaaggtgaaggtggaggtggtggaggtggactcctcctcgtcggaggaggaggagagggaggcgcgggggtgggtcgaggtgggcggcgggcggcgggtgccgggggaggtggtggtggaggtgatgcggaggctgccgccgaggggcgtggcggcgtccgccgccgtctgccgcgggtggcgcgggtgcgcgcgccgcgtgtggcgcgccgccgacgagctccgcctccgcgccgccggtgtccgccccgtcggcgccctcctcccccgctgccccgcgctctccaggctcgtgctccgcatggaaagtgatattgatgctactatgctcgcatgcgttgcattttcttgccctaatttgcaatatctggagatcagcatggtcggaagcgcagccaaccgaatgacaggggatgagctaactaggtttgtctcagagaagcgatctctctcggttctcaaattagatggttgcagtaatctcaattttcttaatataagctcttcaagcctttcaacgctttggctatcagatctttcttccctttcgaaatcggtcataaactgtcctaatttgaatgaactctcactgggatttacccaacaaaataatgattctacggatctgattagtctgatggatagtctgggtcgtacctgctcaaatttgagaaacctgcacatatcctcaattcatttatgcaatgaagctgtgttttctctagagagtgctaatctcaggggcctatgcatgctatccttgattcttggttcaaaaataacagatgcagctgttgcatctattgttcgctcttacgcaagcttggatttgcttgatttaagcggatctagcattactgataatgggcttgggatgatctgcaaggcattccctcatactctaaccaggcttctccttgccctttgcccaaatatcacctcatgtggggtgcaggtggctacttcacagttgccacttcttcagctcatggactgtggcaagagcttatgtgctaattcgcagcctgaagcagagagatcatattttggtgaaatttatggagggattaagttttgttcaaaattacctatccagagaaagcagcagcctaattaccaaaagctgataataaaacatgctaacctgaagaaactcagcctttggggctgttcagctctggatgccctgtatgtaaattgtccagagctgagtgatctcaatctcaactgttgcacaaatcttcatccagaacggttgcttcttcagtgcccaagcttgaaggatgtacatgcctctgggtgccgtgacatgctgattggagcaatcagaaaccaggttctgaatgagtttgcttcagcagagcctcgggttccttgcaagcggctagcggatggttcaaaacgtgtacaagtcccacacttcatgctcgaacagcaattcgaggaggagaaatggggcagcgggtcgaagcggagccagtgcaccgttcacctgagctaa</cdnaseq>

Protein Sequence

<aaseq>MASSSDASSALAAAAAVGKKRGSYNCGRCGLPKKGHVCAVAGEE QKPPRRALHFDEAAPPPPPEKKVKVEVVEVDSSSSEEEEREARGWVEVGGGRRVPGEV VVEVMRRLPPRGVAASAAVCRGWRGCARRVWRAADELRLRAAGVRPVGALLPRCPALS RLVLRMESDIDATMLACVAFSCPNLQYLEISMVGSAANRMTGDELTRFVSEKRSLSVL KLDGCSNLNFLNISSSSLSTLWLSDLSSLSKSVINCPNLNELSLGFTQQNNDSTDLIS LMDSLGRTCSNLRNLHISSIHLCNEAVFSLESANLRGLCMLSLILGSKITDAAVASIV RSYASLDLLDLSGSSITDNGLGMICKAFPHTLTRLLLALCPNITSCGVQVATSQLPLL QLMDCGKSLCANSQPEAERSYFGEIYGGIKFCSKLPIQRKQQPNYQKLIIKHANLKKL SLWGCSALDALYVNCPELSDLNLNCCTNLHPERLLLQCPSLKDVHASGCRDMLIGAIR NQVLNEFASAEPRVPCKRLADGSKRVQVPHFMLEQQFEEEKWGSGSKRSQCTVHLS</aaseq>

Gene Sequence

<dnaseqindica>1..503#1639..1740#2109..2253#2336..2520#2631..2735#2841..2938#3020..3258#3364..3430#3524..3609#3913..4011#4138..4203#atggcctcctcctccgacgcttcctccgccctcgccgccgccgccgcggtggggaagaagcgtggcagctacaactgcggcaggtgcgggctccccaagaaggggcacgtctgcgccgtcgccggggaggagcagaagccgccgaggagggcgctgcacttcgacgaggcggccccgccgccgccgccggagaagaaggtgaaggtggaggtggtggaggtggactcctcctcgtcggaggaggaggagagggaggcgcgggggtgggtcgaggtgggcggcgggcggcgggtgccgggggaggtggtggtggaggtgatgcggaggctgccgccgaggggcgtggcggcgtccgccgccgtctgccgcgggtggcgcgggtgcgcgcgccgcgtgtggcgcgccgccgacgagctccgcctccgcgccgccggtgtccgccccgtcggcgccctcctcccccgctgccccgcgctctccaggctcgtgctccgcatggaaaggtgaggagacaaaaaataaccaaacagcttcccttccacctgtcgaacaccatggatccgcgagatcgatgagtttggtctcgcttcgtgccgcatccccgtggatcttcttcccatgaacgcaccatggaacatcggtgatgcaatccgctaaccttgttggaaaccgggatataactaactaacttactagctaacgaatcggacagcgaaaatctcgctaaaaattcaccgtgacattgctaagctaaaagaagaacacggtgcagatgtgcgatctgattctgatctggtgccgtgagatctctccacctgtggatctttgagcggtgcctggtttagattcatcgcacgcatctcacgatgcaagaaatcccacgaccgaaacatttgtgtttgtgaaatgattgatgggataagcaaaggtttggtggtgctgatccgatctgtctgtccgaattttgggttcttggttgatgtggggttttatcggggaggatctagtcatcatcttggttccgggagattggtctatggatctttcttttctttgattggtgcctggatctggatgggcttgtgagattgaagcatggatctgatagttgtccatctgtgatgcacaatatgtgtgcccaaatgctaagataatatagtgtgatgctaagatatttcttttggtgtttgggaacaaaggtaacagatgaaaatcttcagagaggaacgaaacctgttatgtgcactaagtacataattctggttaaccatgccacaagatttagttcggattttggaagaatagatttgcttgattcggtgattcagaagttgtcttggtcatttaggcaaaatagggggattactgggtggatctggtgtttcttcatgtgaactttgtcgtggatatggattgtgtcctgcagaaagccagcaaaatgcagctcttacagtgagggaaagtgaaattctgtctcactgtcgatctgcttttgttggttcatctagatctactctgagggccgaattcaaatagatctttagaatataaatgtttaaaacatacgtttcattcaatctcttgaatgcgctagcaagttagcaattgtctaatgagttctttgttattttgatgcagtgatattgatgctactatgctcgcatgcgttgcattttcttgccctaatttgcaatatctggagatcagcatggtcggaagcgcagccaaccgaatgacagggtacggtgaaaatctccaaaatattttgagtctattgtgaaatgccacctttccatacattgtattcctgtgatagctaactttgtgttatttctattgtttcattttgagtagaaagcaatgtgtatacgactagtttctaataagaacacatttgcaaaattgcaattgtgtgctaccaaacttttagtgttatatgatttaagatgtatattctgagaattttgtttcacactacacctttatctttttttttttgctttttgtcactgtaactcaagaaactctggtttaatagatatatgttttcgatttgcatttcaagccttgagtctcttaactgacttcggtgacctgtttttccacagggatgagctaactaggtttgtctcagagaagcgatctctctcggttctcaaattagatggttgcagtaatctcaattttcttaatataagctcttcaagcctttcaacgctttggctatcagatctttcttccctttcgaaatcggtaatacaacctgctcctacaattattcagttaaatggatttaccattgcataaattaattgaggtactaatttttttgcaggtcataaactgtcctaatttgaatgaactctcactgggatttacccaacaaaataatgattctacggatctgattagtctgatggatagtctgggtcgtacctgctcaaatttgagaaacctgcacatatcctcaattcatttatgcaatgaagctgtgttttctctagagagtgctaatctcaggtacttaatatatgctgctcatttgtcatgaatcatgttagggggagtcttgttataattataatttcttgagttaaatcctcaacccatcttttttcttgttttatcaggggcctatgcatgctatccttgattcttggttcaaaaataacagatgcagctgttgcatctattgttcgctcttacgcaagcttggatttgcttgatttaagcgggtaagcattgttttgtagggtctaaattctttgaatcagatggctgatattttgtcacaaagttcctgcaaaacaatgtctgaatttactttgcttgaacttcagatctagcattactgataatgggcttgggatgatctgcaaggcattccctcatactctaaccaggcttctccttgccctttgcccaaatatcacctcatgtaagccttaattttttttcttctattgatttaaaaagaataaagaagacaataagtaacaccttttcatctgatttacaggtggggtgcaggtggctacttcacagttgccacttcttcagctcatggactgtggcaagagcttatgtgctaattcgcagcctgaagcagagagatcatattttggtgaaatttatggagggattaagttttgttcaaaattacctatccagagaaagcagcagcctaattaccaaaagctgataataaaacatgctaacctgaagaaactcagcctttggggctgttcagctctggatgtaagtcttttgaatatttccatcatcaatcctttcatacatctggttgctaataaacacaacatattaaagctgagttctcattaccgcttctctctttttcaggccctgtatgtaaattgtccagagctgagtgatctcaatctcaactgttgcacaaatcttcatccaggtgcgatgtctcttcctgaaaatgcaggtgccactttcctacagtgttaaccgctaaaatgcaagtgttaacagcttgagaacgtttatacagaacggttgcttcttcagtgcccaagcttgaaggatgtacatgcctctgggtgccgtgacatgctgattggagcaatcagaaaccaggtaggacttcgctgatcctgtttgttaagcattgacactttgcgttgtaatggatctgactcaagtacatgatcactggatgaacttgtttccagagtcctagtaatttagatcaaacaccacagaagcaaatgtgtgctagcctttttacaattgatgatgactaaataataaactgaacatgtgagggaagtagaatttttaaggctggacataatcaaataccatacttcaacaacatggttacctctaattgccacatctatttgcgaaaagcgtgacaaaacgtcttctttttgccaggttctgaatgagtttgcttcagcagagcctcgggttccttgcaagcggctagcggatggttcaaaacgtgtacaagtcccacacttcatgctcgaacaggtaaaacagaaaaccttcatttcttggaagcagatcaccattgcccccatctaggcagagtttctttgggagttcatccacctgtctgctgcatcagctgtctgatcggttgcatgattctttcagcaattcgaggaggagaaatggggcagcgggtcgaagcggagccagtgcaccgttcacctgagctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0601000, RefSeq:Os12g0601000