Os12g0601300

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Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0601300| Description = Similar to Auxin-responsive protein (Aux/IAA) (Fragment)| Version = NM_001073741.1 GI:115489443 GeneID:4352721| Leng...")
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Gene Name

Os12g0601300

Description

Similar to Auxin-responsive protein (Aux/IAA) (Fragment)

Version

NM_001073741.1 GI:115489443 GeneID:4352721

Length

5258 bp

Definition

Oryza sativa Japonica Group Os12g0601300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25537341..25542598

Sequence Coding Region

25537801..25537838,25537980..25538041,25538198..25538330,25539485..25539732,25541996..25542348

Expression

GEO Profiles:Os12g0601300

Genome Context

<gbrowseImage1> name=NC_008405:25537341..25542598 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25537341..25542598 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggacctggccttcgaggcgaccgagctccggctcggcctgcccggcggcggcggtgatggagacgccgcggcggcggcggcgaggagctcctccgggaagaggggcttcgccgagaccatcgacctcaagctgaagctggagccggcggccgcggcggtggacgacgacgacgacaaggaggaggcggcggctgacgaccgggagaagaaggtcgacatcgtcggagctgacaacgacgacgcctcgccgccggccgccgccgccgccggcgggatgaagcggtcgccgagccagagcagcgtcgtcaccgccgccgccgaccccgagaagccaagggctcccaaggcacaggtggttgggtggccgccggtccggtcataccggaagaacatcctggccgtgcaggccgacaagggcaaggacgccgccgacggcggcggcgacaagtccggcgccggcgccgccgccgccgccttcgtgaaggtgagcatggacggcgcgccatacctgcgcaaggtggacctcaagatgtacaagagctaccttgagctctccaaggcactcgagaagatgttcagctccttcaccattggaaactgtgggtctcatggggtgaacggcatgaacgagagcaagattgctgatctgctcaacggctctgaatatgtgccaacctacgaggacaaggacggcgactggatgctcgtcggcgacgtcccatgggagatgtttgttgaatcatgcaagcgccttaggataatgaaaggatcagaagctattggccttgcaccgagggcaatggagaaatgcaagaacagaagctga</cdnaseq>

Protein Sequence

<aaseq>MAADLAFEATELRLGLPGGGGDGDAAAAAARSSSGKRGFAETID LKLKLEPAAAAVDDDDDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQS SVVTAAADPEKPRAPKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAA AFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIAD LLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNR S</aaseq>

Gene Sequence

<dnaseqindica>4761..4798#4558..4619#4269..4401#2867..3114#251..603#ctcctttacatcacatttctagccaccctctcatcatcaccatcaagctcaaaccaacaagaagagagctagcttttggtactattagccactagtagatagccaagaagaaaccaagaaattctttgagctatctaattagctaggtccattgattcatcatcatctccattgatccacttagctttgaagaagaagaagaagaagacatttagttagctagctatattgaggtgaggtggcggcggcaatggcggcggacctggccttcgaggcgaccgagctccggctcggcctgcccggcggcggcggtgatggagacgccgcggcggcggcggcgaggagctcctccgggaagaggggcttcgccgagaccatcgacctcaagctgaagctggagccggcggccgcggcggtggacgacgacgacgacaaggaggaggcggcggctgacgaccgggagaagaaggtcgacatcgtcggagctgacaacgacgacgcctcgccgccggccgccgccgccgccggcgggatgaagcggtcgccgagccagagcagcgtcgtcaccgccgccgccgaccccgagaagccaagggctcccaagtacgtgcacagctaccttagcttagctaatgcccttcttaattttgcatgcatgcaaatcatgcaataatctctccaaataaaatcaagttcaaacatcaaacatacatgtaatcatcctctccaaataacaaaacttagcaaattttaaaccctagcataacccacctctaaccttacataacaaaagaacaagtaaatccttttcatgccaagattcgcagatattcatcctgcagttgatttgcttttgggataaagaaagctttattgatcttagataattacaacagccgaggcaactgattaattagctacatagttaagttaatcagttaattcctcgatttatgtatgtgtatcacaatgatgaacaccaaggatatcgatcgatcgatcgatgtgaaccaaagcgcaaaaaaattagttaattgttttttttttgtaaactgtaatactagtatatgaatataaaccaaattgattgctactaggagagaagagaaaagaattaattggtgtggtatgtatggctggatctaagggacagatatattcattggtagtagatgcacagagagaaagagcaaagcaaaatgtacaaggtactagagaagaaggcagagagacatgggcatgttacttgtgggtcacaggggagacactgcctagtgccgacacgataaaagaaataaagccacacatactactaattctctctctctctttcttgcacagttcatcttttgtccacatcaccatcatttccatatcactagcccaacctatagttcttgagatgttaccacacatgcatgcatgataaagacgaaataaattaatatttggatacactacggccattcccaacccaatgactaggatggtgtccatagcattaaataagctgccacctaaaataaaaaatgatatggcaagtgaataaatgaagaaagataaaaaaaccatgagacatggtttctacacaatattaaagacatcatgtgagataagtagcattaaatttaagtacggaatagtggtgcttgcattggaagagtagtgtctagtattagtttcttgatgatgtggagcttatagaaactatgtggaactaatatcttaggttgggaatggcctactacatatgttggccatgcttgttgccttttagttcttgagagtaaatgtatttatacatgcatggcctaccattttggatctgtctatatactctacatgcacggatgcacccttgtcgagagtcttctgttcatatttggttttatttttatttacagaaggaaaataattaaaggtaggtttgggtagccattgatgttgcaggagtgtgtgtgtgtgtgtgtatatggggggttttttttattagttgaagatgaattggaaatgtgatgtgaaatgtggtaaatgttgggtgttgtgtttaattatgtggatgaagaataggttgtgtgttagcttggaaggtacatgcatgtgtgccaccacaaaaggttcctcctttttccatgatttgatgcccctcccaatagtctcatggaccagttcacctatataatacaagtttatatacaagtaaaaggagaatctcatataaaacagaaaagggaaatgtaatttattctgcatatggtgaaaactgaaaacaagtaaccatgttcactagacaaggcctgaaagtaccatattgacgggagaaaaagaaagagccatatatactccattatattggtctatttgtggattaattggattacaccatgtacattgattagatatatataccacctccagtttgaagcaccattgacttttctacaaagttttcctttaaaaaaaactctttctccaaagtttgaccatgcaacaatatttacttaattacttagttaaatgaagtgaaaagactcaaagagtactactatatctgttaccaaaagtactttaagcatacttaatttgtatctctatcgatttacataaatatttttagaaaagatcaataatcaaacgaattaaaaaaatcaatggtgtcatgcatatattttaaaccagagatattatattacagagctactaccaccatttacgagaaagctagtattaaaccttaagaaataaataaaaaacacaaacaattcttcagtaagatatttggtaataatattatagagctacttctagtaactagctactcttaattattaatcggtgaaaaaaattggttaaatcttcttcacagggcacaggtggttgggtggccgccggtccggtcataccggaagaacatcctggccgtgcaggccgacaagggcaaggacgccgccgacggcggcggcgacaagtccggcgccggcgccgccgccgccgccttcgtgaaggtgagcatggacggcgcgccatacctgcgcaaggtggacctcaagatgtacaagagctaccttgagctctccaaggcactcgagaagatgttcagctccttcaccattggtaattatattaattacacataatatatgtttttatatataccatcgtattttcattcattccacatattcgcattttaaatgtctattcctttaaaaatctcacgctcaacatatctatcctaaaatataacaatttttgatagctatacacatatctggataacaacttgttcagatacaaagctataagttattatattttggtatagatgtagtatttatcatataattttacaaaagctataattgaattatattgttttgtgcaaagttagtgagaacttccaagacctaaatatataggactttgattagggtattgttgcctagctttaatctttgtgcaaagtgaggttataaagttagtagcagctagcttaggtggtgcatgatgaagggttggggtatatgattgcatttgggggggcatttgcatgtgtggtggtggtcaccatgtggtttttgccaaggagtgcactccatgatttgattaatttgcatcctttggtagtagtaggtgtgtctgcctgccctagttgtctggcataatgccattgtctctcatctctctttgctagctaacacatgtacatggatatcatcatcatatatatgtttgctatctatagatgttaatttgctagctaagctcatgatcaaggttgcatatatctgcttaattagctactagcagctggagtttggtccattgatcattggcatgtgctgctctaaatccaagtgcataataatcaaatccacgtgttgatgcatgcatctttaaaaaagatatgggaaacatatggtattgttcagagagccaaaagatgattaaattggtcggctttttaggtgtgcaagtgtgtgtgaggttcgtttactgattgagccttgacacttgcttttaattagtagatagctaattacctcaatcattgtcatatagaagtgcaatataattctccattccaaactgaactctgaacaaacctagcaatgcaaaaaaaaaatactctggaaactgttaaattgcaaagaaaaatagacatcattttaattaggttgtactgtataatcaaattaatcggcatggagttgtagatgcttaatgtttttggtatgaagcttaatgtctgaattaattttcatcaggaaactgtgggtctcatggggtgaacggcatgaacgagagcaagattgctgatctgctcaacggctctgaatatgtgccaacctacgaggacaaggacggcgactggatgctcgtcggcgacgtcccatgggagtcagtaatctctacttaaattttctattatctaatatctaagtgtttaattttaataacctgaattaaggtactagtctgaatctctgatatgagtccatgctctgcatctgtgttctgaattctgaccattttgtttggaaatggaaatttcaggatgtttgttgaatcatgcaagcgccttaggataatgaaaggatcagaagctattggccttggtcagtgcatatcaagttttatttctacatacaaattagctcctttgggtttgattttaagttggggtttaatttaagttggatatcagttactgacagaacagtgaaatataatatattttttgttttgaattgtttcagcaccgagggcaatggagaaatgcaagaacagaagctgagaaagaagaacatgtcgccatcaaaaacggatggatcatcatcagatgcaacaatctatctatagcttttcttaattgcagctttgcctcatccctgtatcatactcgcttgctgtcctcatctccaagtctgtacctttcctgatcagtgaaagtcattttggtgttgtggtcagtttctgttctgttgcagtcattaagttcctaagtgtgtcatcttgtcttatacataagaaagaagccaagaacatgtaccagtagtacctgtcccataattatgtcttttttgctctccctgttcttccctttctctctgttttttttttaccttaatggcacaaaatgtaaaggcaccctgctcaaagggacctcaatgtattttgtccatgaaaaggttgtttaattatcttcatggtgtatccatcaaacaaataattattactgcaaggtgttatgtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0601300, RefSeq:Os12g0601300