Os12g0601400

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Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0601400| Description = Similar to Auxin-responsive protein (Aux/IAA) (Fragment)| Version = NM_001073742.1 GI:115489445 GeneID:4352722| Leng...")
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Gene Name

Os12g0601400

Description

Similar to Auxin-responsive protein (Aux/IAA) (Fragment)

Version

NM_001073742.1 GI:115489445 GeneID:4352722

Length

1557 bp

Definition

Oryza sativa Japonica Group Os12g0601400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25552003..25553559

Sequence Coding Region

25552127..25552278,25552377..25552739,25553036..25553114

Expression

GEO Profiles:Os12g0601400

Genome Context

<gbrowseImage1> name=NC_008405:25552003..25553559 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25552003..25553559 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaatctgaaggcgacggagctgaggctcgggctgccggggacggaggaggaggcggcgccgccgccgtcgacgcccagggccggaagcaagcgcgccctcgccggcgagcctgatcaggccaagatcaagcccgccgccgccgccaaggcgcaggtggtgggatggccgccggtgaggtcgtacaggaagagctgcctccagccgacgacgacgacgacgaagagcaagccgccgccggctgccgcggcggcggagacgcagcagaaggaggatgtcgccggcgccggtgggctgttcgtgaaggtgagcatggacggagctccatacctgaggaagatagacctcaaggtgtacaagggctaccgggagcttcgcgaggcactggaggccatgttcctctgcttctccggcggcgccgccgccgacgccgccgtcaacccgtccgacttcgccgtcacctacgaggacaaggacggcgacctcatgctcgtcggcgacgtcccattcgagatgttcattagtacgtgcaagaggttgaggatcatgaaggggtctgaagcaagaggcctaggagcaacaaggggttaa</cdnaseq>

Protein Sequence

<aaseq>MENLKATELRLGLPGTEEEAAPPPSTPRAGSKRALAGEPDQAKI KPAAAAKAQVVGWPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQKEDVAGAGGLFV KVSMDGAPYLRKIDLKVYKGYRELREALEAMFLCFSGGAAADAAVNPSDFAVTYEDKD GDLMLVGDVPFEMFISTCKRLRIMKGSEARGLGATRG</aaseq>

Gene Sequence

<dnaseqindica>125..276#375..737#1034..1112#acgaagacaaagtcagaggtcacacagctcatcgtctcgagctacctagctggaagaagaagaggaagaagaggaggaggagctcgtcggagtttagttggtgagttcgccggagagatcgatcatggagaatctgaaggcgacggagctgaggctcgggctgccggggacggaggaggaggcggcgccgccgccgtcgacgcccagggccggaagcaagcgcgccctcgccggcgagcctgatcaggccaagatcaagcccgccgccgccgccaagtaattaatatcaagttcttcttcgtcttcgtcgccgtcgccgccatggatggcagagctagctctgatacgtgtcgtgtttgctgctgctgctgcagggcgcaggtggtgggatggccgccggtgaggtcgtacaggaagagctgcctccagccgacgacgacgacgacgaagagcaagccgccgccggctgccgcggcggcggagacgcagcagaaggaggatgtcgccggcgccggtgggctgttcgtgaaggtgagcatggacggagctccatacctgaggaagatagacctcaaggtgtacaagggctaccgggagcttcgcgaggcactggaggccatgttcctctgcttctccggcggcgccgccgccgacgccgccgtcaacccgtccgacttcgccgtcacctacgaggacaaggacggcgacctcatgctcgtcggcgacgtcccattcgagtaagttgcttccaattttttttagtttaattaagtttaataaattttttttacaacttctagtatcataaattagtatcattaaatctaacattaatatattttgatagtatatatgtttgtctttttaaatgctactatgtttttctataaatttgggttaaacttaaaatttgcctaaaataaaatcagaacagcttataatatgaatcagagaaaattggaacgacttatagtatgagtcaattatttacttgaattatttctaattaactctatgattgtctttttaataggatgttcattagtacgtgcaagaggttgaggatcatgaaggggtctgaagcaagaggcctaggagcaacaaggggttaaaaactgaacaacaacaagaagaaatcatcatcatgtgtgcatgagcaattcttttgttctttttgggttctccaagacatgcaatcatctcatctcctcattgcaaccttcaagaaagagagagagagaaagaaaaggaaagcaaaaaaaaaaaagatgcagtgaaaaaaatatgtgaagcttaattggagtcatcagattgcaaagcatgcatgcatgtgtggatgtgtggctttaatttgtttttttcctcttaattaggtgttagaaaacacagaaggaatggaggttcgagttgagcctccatgtgtgtttgtacaaagcaaacatcttttttcttttacatgaatggttgattacttttgtaactggagggaagaagaatgcatgtatgcatgggctgtgtgtacttctccctctggcttcaatgctttgatttccatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0601400, RefSeq:Os12g0601400