BGIOSGA009109

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Revision as of 03:26, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009109| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009109, complete gene.| tag = OJ1004_...")
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Gene Name

BGIOSGA009109

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009109, complete gene.

LocusTag

OJ1004_A11.24

Ensembl Transcript ID

BGIOSGA009109-TA

Ensembl Protein ID

BGIOSGA009109-PA

Length

4530

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34352938..34357467

Sequence Coding Region

34352938..34353180,34353275..34353565,34354205..34354541,34354992..34355326,34355811..34356058
,34356344..34356929,34357018..34357131,34357213..34357467

Genome Context

<gbrowseImage1> name=IndicaChromosome02:34352938..34357467 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:34352938..34357467 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGAGCCAGCAGCGGCCGAAGCCATGGATGTCGAGGCGCCGGCGCGACCAACCACCACCACCAGCACTGTACCCACCTCGAAGGGCAAGTCCCCCCACGACCTCCTCGCGGAGACCCGCGCCTCCGTGGAGGAGGTCGCCGCCCGGATCCTCGCCATCAAGAAGGACGACGCCCCCAGAACCGAGCTCCGGGAGCTCGTCGCCCAGATGTCCCTCCTCCTCATCACGCTTCGCCAGGCGAACAGGGAGATACTGATGGAGGAGGACAGGGTGAAGGCGGAGACGGAGGCGGCGAAGGCGCCCGTGGACTCCACGACGCTGCAGCTGCACAACCTTCTGTACGAGAAGAACCACTACGTGAAGGCCATTAGGGCGTGCCTCGACTTCCAGACCAAGTACCCGGGCATAGAGCTCGTGCCGACGGAGGAGTTCCACCGCGCCGCGCCGGCGGACATCCGCGATAAGACGCTCGCTGCTGACGCGTCCCACGACCTCATGCTCAAGCGCCTCAATTTCGAGCTAGTCCAGCGGAAAGAGCTATGCAAGCTACATGAGAAATTGGAGCAGCGGAAGAGCAGTTTGTTGGACACAATTGCAAATCAGAAAAAGTTCCTTTCGAGCCTCCCAACCCATTTGAAATCACTGAAGAAAGCATCATTGCCAGTGCAGCAGCAGCTGGGGATGCAACATACCAAGAAACTAAAGCAGCATCATGCAGCTGAACTGCTTCCAACTCCTCTATATATAGTTTACACGCAGTTATTAGGACAGAAAGAAGCATTCGGAGAGAATATTGAAGTGGAGATCACTGGAAGCACAAAGGATGCTCAGATGTTTGCTCAACAGCAAGCTAAGCAGGAAAATGCTGGCACTTTGTCAAATGGTGATAATAGAGTGGATGACGATGCAATTGATGATGAAGAAGATGCTCAAAGAAGAAGGTCAAGGTCAAGAAAAAGTGTTGTGAAGGAAGCTAGTAATTCAGTAGTGGCATATCAACTTCATCCCCTTAAAGTTATTCTCCATGTATACGACACTGAAGAGTCTGGAGCAAAGCGTCGTAAGCTCATGGTCCTGAGATTCGACTACTTGGCAAAGTTGAACGTTGTTTGTGTTGGAATTGAAGATTCAAAGGGGCTGGACCATGATATCCTATGCAACTTATTTCCAGATGACACTGGTTTAGAGTTGCCTCATCAGATGGCTAAACTTTATGCTGGGGAGGTTCCGAACTTCAGTGAAAAGGATTCAAGGCCATACAAGTGGGCACAACATCTAGCTGGTATAGATTTCTTGCCAGAAGTGCCTCTATCTGTTGGTGATGATTCTAACAGAGCATCGAGAAGTGCGGACTTGTCATCTGGGCTTGCTTTATACCGTCAGCAGAATCGTGCACAGACTATTTTGCAGAGAATCCGCTCACGGAAGGTTGCACAGATGGCTCTTACGTGGCAGCTTGATTATTTAACTAAGCTGAAGTGGCCTCAAATTGAACACGAGAATGCACCATGGGCATCACGTACCCCATTGTGTAGTCTGCATAGCTGGTCATTTACTGGGATATTTCCTGAGCCAGCACCTCGTTCTCCTTTGATGGTTGTTGGGGCTGCAGGAAGTGTTGACAGTGATATGGAGCGAAGATCTGTGACGCATTGGGAAGAAACTGAGAGTACCAGGGAGGATGGGGAGCTTCTGGCCGTGGTTCCTGCTGAAAACACGCCAAGTGTTTCTAAAATATCACACTCTGAAGTGTCACCGGAGGTTCGAAACCATTCTAGAGGCTTATCCCTGATATCAAAGAGCGCCACACCATCTAAACTAAGCATCTCACACAGTTTTGGTAGAAATGAGGACGATCTTGATCTCTTGATGTATAGTGACAGTGAGTTAGAGGAACAGACATTTGTTGACCAAGAAGTGGAAAAAGTCAACCTTGCTACAGACAAATCCTGGGAGGACTATGCTTCCAGGGAGTTTACCCTGGTCTTGAGTAAAACTCTGAAGAATGGTCCAAAAGTAATGCTGGAAGCCAAGATTGCGATCAGCATGGAATATCCTGTTAGGCCACCTTTTTTCACATTGCAATTGCTTTCGGGAAAGACTGAAGCTTTAAAATGGCACAATGATCTTAGAGCAATGGAAGCTGAGGTGAATCTTCACATCCTTCAGGTTGTACCTTCGTCATATGAGGACTACATACTTACTCACCAAATTCTGTGCCTGGCTATGTTATTTGATATGCATTTTGATGAGGATCATGGTAAAAGAAAGGTTACTTCAGTGATTGATGTGGGTCTATGTAAACCAGTTAGTGGAACCATGCTTACCAGATCAGTCAGGGGAAGAGACCGCAGACAGACTATTTATTGGCGCAGCGCTGATTGTTCTTCTAGTTGTTTATAG</cdnaseq>

Protein Sequence

<aaseq>MAAEPAAAEAMDVEAPARPTTTTSTVPTSKGKSPHDLLAETRASVEEVAARILAIKKDDAPRTELRELVAQMSLLLITLRQANREILMEEDRVKAETEAAKAPVDSTTLQLHNLLYEKNHYVKAIRACLDFQTKYPGIELVPTEEFHRAAPADIRDKTLAADASHDLMLKRLNFELVQRKELCKLHEKLEQRKSSLLDTIANQKKFLSSLPTHLKSLKKASLPVQQQLGMQHTKKLKQHHAAELLPTPLYIVYTQLLGQKEAFGENIEVEITGSTKDAQMFAQQQAKQENAGTLSNGDNRVDDDAIDDEEDAQRRRSRSRKSVVKEASNSVVAYQLHPLKVILHVYDTEESGAKRRKLMVLRFDYLAKLNVVCVGIEDSKGLDHDILCNLFPDDTGLELPHQMAKLYAGEVPNFSEKDSRPYKWAQHLAGIDFLPEVPLSVGDDSNRASRSADLSSGLALYRQQNRAQTILQRIRSRKVAQMALTWQLDYLTKLKWPQIEHENAPWASRTPLCSLHSWSFTGIFPEPAPRSPLMVVGAAGSVDSDMERRSVTHWEETESTREDGELLAVVPAENTPSVSKISHSEVSPEVRNHSRGLSLISKSATPSKLSISHSFGRNEDDLDLLMYSDSELEEQTFVDQEVEKVNLATDKSWEDYASREFTLVLSKTLKNGPKVMLEAKIAISMEYPVRPPFFTLQLLSGKTEALKWHNDLRAMEAEVNLHILQVVPSSYEDYILTHQILCLAMLFDMHFDEDHGKRKVTSVIDVGLCKPVSGTMLTRSVRGRDRRQTIYWRSADCSSSCL</aaseq>

Gene Sequence

<dnaseqindica>1..243#338..628#1268..1604#2055..2389#2874..3121#3407..3992#4081..4194#4276..4530#ATGGCGGCGGAGCCAGCAGCGGCCGAAGCCATGGATGTCGAGGCGCCGGCGCGACCAACCACCACCACCAGCACTGTACCCACCTCGAAGGGCAAGTCCCCCCACGACCTCCTCGCGGAGACCCGCGCCTCCGTGGAGGAGGTCGCCGCCCGGATCCTCGCCATCAAGAAGGACGACGCCCCCAGAACCGAGCTCCGGGAGCTCGTCGCCCAGATGTCCCTCCTCCTCATCACGCTTCGCCAGGTCTGTGCCGCTCCCGAATCCGCAACGCCTCTTCGCCGGGAACCCCTCGCGTTAGATCTGCTGTTTGCTCACTCGAGGGTTTGGATTTGCGCAGGCGAACAGGGAGATACTGATGGAGGAGGACAGGGTGAAGGCGGAGACGGAGGCGGCGAAGGCGCCCGTGGACTCCACGACGCTGCAGCTGCACAACCTTCTGTACGAGAAGAACCACTACGTGAAGGCCATTAGGGCGTGCCTCGACTTCCAGACCAAGTACCCGGGCATAGAGCTCGTGCCGACGGAGGAGTTCCACCGCGCCGCGCCGGCGGACATCCGCGATAAGACGCTCGCTGCTGACGCGTCCCACGACCTCATGCTCAAGCGCCTCAATTTCGAGCTAGTCCAGGTTGTGTACCGTGATCAGTTGATTCAGTTCCTACACAAATAGGAGATTTACTTGTCATGGGATAAATTCTTGTGCTTTGTTCATTGTTCGTCTAAATGATTAAAGCATCATAGAGAGTGTACAGGATTGTATGAGCATTTAGATTGGGGGTTTGTTCTGAAGGATCAGGGTAATAATCGAAAGAAAGAATCACATCGTAGCTGGGTTGACCTGCTAGTAAATTTAACGTAAATATTTAGCTTGGCTTGCAGGATTGGTTCTCCAAAAATTCAAATGTATATATAGAAAATGTTTTATAAATTCACCGTTATTTTTGTAGTTTAGAGTGCTCATATATCAAACTGTTCTTAAGTAGAACGCTTTGTTGTTATGGAAACTCTTTTTATGTATATTGATTTTAGTCAGTTGCATAATTCTTCTTAAATCTGATAATTCTTTGTGTGACTAGTGATCAAGGTTTGTAGTATGTTTTTGGATATGATTTGATCTGCTTAATTTGTTTATCACCTCTAGTTGTTTGAATATGTGTTTGCTTGCTAGGACAAAAGTCCCTTACTCCCTTTGTGCTAGTGTGGTCTTGATTTGTTTGGGTCCCAATATTTGTTCTGATATCTAAAGTAAGTTTGAAATCTGAAACAGCGGAAAGAGCTATGCAAGCTACATGAGAAATTGGAGCAGCGGAAGAGCAGTTTGTTGGACACAATTGCAAATCAGAAAAAGTTCCTTTCGAGCCTCCCAACCCATTTGAAATCACTGAAGAAAGCATCATTGCCAGTGCAGCAGCAGCTGGGGATGCAACATACCAAGAAACTAAAGCAGCATCATGCAGCTGAACTGCTTCCAACTCCTCTATATATAGTTTACACGCAGTTATTAGGACAGAAAGAAGCATTCGGAGAGAATATTGAAGTGGAGATCACTGGAAGCACAAAGGATGCTCAGATGTTTGCTCAACAGCAAGCTAAGCAGGAAAATGGTTGGTTCATATAATCATATCTCATTGGAATATAGTTTATTTGATTTCCTATTACAGAAGTGCAATACTCGCAATAATTAATGACATTTATTCTATCTCTTCTCATGTACCGTATGATATGTAAGGGATCCTTTTTACTACTTTTAGAAAAGCAATGTAGCGTAGCCACATATTAAATGACCAGATGCAATTTCCTAGTAGATACTTGTGTCTAGCATAAACAGTTCGTTCTCATATAGCAGTATAGAAGCCCCGGTCTTTTATGGAAGCTGTTATATTTTAGTTCCTCATTACAAATTGAAGCTGCATGTAAATAATGCATGCTTGCTTCAATACTTGTATAATGGTTAGAATCAGATTGCTAATGGTTCTCTTCCACTTGTTATAATCTGTAAAGGTGGTAGACTAGGAAATATTTCTGATAAAGCGTGTCTTTTGTATCTGCAATAGCTGGCACTTTGTCAAATGGTGATAATAGAGTGGATGACGATGCAATTGATGATGAAGAAGATGCTCAAAGAAGAAGGTCAAGGTCAAGAAAAAGTGTTGTGAAGGAAGCTAGTAATTCAGTAGTGGCATATCAACTTCATCCCCTTAAAGTTATTCTCCATGTATACGACACTGAAGAGTCTGGAGCAAAGCGTCGTAAGCTCATGGTCCTGAGATTCGACTACTTGGCAAAGTTGAACGTTGTTTGTGTTGGAATTGAAGATTCAAAGGGGCTGGACCATGATATCCTATGCAACTTATTTCCAGATGACACTGGTTTAGAGTTGCCTCATCAGGTTGGAATCAGCTGATTTTGACTATTGCTAGCTGAATGCCCTTGCATTTTAATGGAATTAAAAGAAAAAAAATCATATCATTACCATTTCAAATATTAATCCAAGAATTCATATTGCTGTTGGAATTTGATATCTTCCCCTTAAATACTTTGTATAAAATTCTCTTATTATTGTTTTGATACCTAACACAGTATACCTACTTGTTCATATCACTATTTGATGGTCCCACATGTCAGGAGATATCATAGTGGTAGGTTAAGGCAGATTCACCATTCACCACCACCACTTGAGTTTTTTTAAAGGAATATATATACAAATCATTCTGTGACAATCTCTAGTTGATAGGTCATTTTGGTTTCCTTATATTTGTGGCCATAGGCAGCAGTGAGCTTTCATGGCTTTATCTCATGTTGGTAGCCAAATGTTTTTGGTTAGTTCTCTGTTATATTATCTTAAAGAGAGTCGTTTTATCAATTTTATGCAGATGGCTAAACTTTATGCTGGGGAGGTTCCGAACTTCAGTGAAAAGGATTCAAGGCCATACAAGTGGGCACAACATCTAGCTGGTATAGATTTCTTGCCAGAAGTGCCTCTATCTGTTGGTGATGATTCTAACAGAGCATCGAGAAGTGCGGACTTGTCATCTGGGCTTGCTTTATACCGTCAGCAGAATCGTGCACAGACTATTTTGCAGAGAATCCGCTCACGGAAGGTTGCACAGATGGCTCTTACGTGAGTCACTGCTTCACAATCTTGTAGTTTGGGATGTAACAAAATTTGGATGGTAGATCCTTATAGATGGAGGAAATGTACTTTGGCTGATGAGTTTTTGCTTCATTGCACATGTCATTCTGTGACGTGCTACATTATTAGTTGATGAAAAATATTTGATGAGCAAAGTTTGTGAACATCTCGTCTCCTTTTTCTTATGAGTACTATGCATTTCCTTTGTGATTAGTAGCATCTTGTCTCTTTTACTTATGACCTCTTATATGTTTTTGAGTTATTTGATTACAGGTGGCAGCTTGATTATTTAACTAAGCTGAAGTGGCCTCAAATTGAACACGAGAATGCACCATGGGCATCACGTACCCCATTGTGTAGTCTGCATAGCTGGTCATTTACTGGGATATTTCCTGAGCCAGCACCTCGTTCTCCTTTGATGGTTGTTGGGGCTGCAGGAAGTGTTGACAGTGATATGGAGCGAAGATCTGTGACGCATTGGGAAGAAACTGAGAGTACCAGGGAGGATGGGGAGCTTCTGGCCGTGGTTCCTGCTGAAAACACGCCAAGTGTTTCTAAAATATCACACTCTGAAGTGTCACCGGAGGTTCGAAACCATTCTAGAGGCTTATCCCTGATATCAAAGAGCGCCACACCATCTAAACTAAGCATCTCACACAGTTTTGGTAGAAATGAGGACGATCTTGATCTCTTGATGTATAGTGACAGTGAGTTAGAGGAACAGACATTTGTTGACCAAGAAGTGGAAAAAGTCAACCTTGCTACAGACAAATCCTGGGAGGACTATGCTTCCAGGGAGTTTACCCTGGTCTTGAGTAAAACTCTGAAGAATGGTCCAAAAGTAATGCTGGAAGCCAAGGTAAATTCTTCAGTTACTCTTTTGGTGTGAGCCTTCCTTAAAGTATGCCCATGCACAATACTTTCTCACTGTGGATTTTTCATTGCAGATTGCGATCAGCATGGAATATCCTGTTAGGCCACCTTTTTTCACATTGCAATTGCTTTCGGGAAAGACTGAAGCTTTAAAATGGCACAATGATCTTAGAGCAATGGAAGCTGAGGTTTGTACTGCTAACTGCTCTCACTTTAATGTATTTCTCAGTGAAGCTTCACTGCTTATGCTGGCTACACTTATGATGCAGGTGAATCTTCACATCCTTCAGGTTGTACCTTCGTCATATGAGGACTACATACTTACTCACCAAATTCTGTGCCTGGCTATGTTATTTGATATGCATTTTGATGAGGATCATGGTAAAAGAAAGGTTACTTCAGTGATTGATGTGGGTCTATGTAAACCAGTTAGTGGAACCATGCTTACCAGATCAGTCAGGGGAAGAGACCGCAGACAGACTATTTATTGGCGCAGCGCTGATTGTTCTTCTAGTTGTTTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009109