BGIOSGA009135

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Revision as of 03:26, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009135| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009135, complete gene.| tag = OS02G07...")
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Gene Name

BGIOSGA009135

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009135, complete gene.

LocusTag

OS02G0777400

Ensembl Transcript ID

BGIOSGA009135-TA

Ensembl Protein ID

BGIOSGA009135-PA

Length

6749

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34988212..34994960

Sequence Coding Region

34988212..34988284,34988910..34989051,34989136..34989207,34989312..34989383,34989642..34989713
,34989780..34989851,34990070..34990141,34990230..34990301,34990388..34990456
,34990552..34990623,34990737..34990808,34990907..34990978,34991223..34991294
,34991540..34991611,34991693..34991764,34991852..34991923,34992002..34992073
,34992220..34992288,34992385..34992456,34992549..34992622,34992713..34992841
,34993036..34993401,34993654..34994024,34994592..34994960

Genome Context

<gbrowseImage1> name=IndicaChromosome02:34988212..34994960 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:34988212..34994960 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGACGACCACCACCACTCGCCTCCTCCTCGCTGCCATTCTCCTCGCGGTGGCCGCCGCCGACGATGACGGACAAACGCTACTGGAGATCAAGAAGTCCTTCCGCAATGTGGACAACGTGCTGTACGATTGGGCCGGCGATGGCGCGCCGCGGCGCTACTGCTCGTGGCGCGGCGTGCTCTGCGACAACGTCACCTTCGCCGTCGCGGCGCTCAACCTCTCGGGGCTCAATCTTGGGGGCGAAATCTCCCCGGCCATCGGGAATCTGAAAAGCGTCGAGTCGATCGACTTGAAGTCGAATGAACTTTCTGGGCAGATCCCTGATGAGATTGGCGATTGCACGTCGCTTAAAACTCTGATCTTGAAGAACAACCAGCTGGTGGGGATGATCCCGTCGACACTCTCTCAGCTACCAAATTTGAAGATTTTGGACTTGGCTCAAAACAAGCTAAATGGTGAGATTCCGAGGTTAATCTACTGGAATGAGGTTCTTCAGTACTTGGGATTACGGAGCAATAATTTAGAAGGAAGCCTCTCTCCTGAGATGTGCCAGTTGACTGGCCTGTGGTACTTTGATGTGAAGAACAATAGCTTAACGGGTATAATACCAGATACTATTGGGAACTGTACGAGCTTTCAGGTCTTGGATCTGTCTTACAACCGGCTCACGGGAGAAATCCCATTCAACATTGGCTTCCTACAAGTGGCTACATTGTCTTTGCAAGGGAACAATTTCTCTGGCCCTATTCCATCAGTAATTGGCCTTATGCAGGCGCTCGCAGTGCTTGATCTGAGTTTCAACCAATTGTCTGGGCCAATACCATCAATACTTGGCAACTTAACATACACTGAGAAACTGTACCTCCAAGGCAATAGGCTAACTGGATCAATACCACCCGAGCTTGGTAATATGTCGACACTTCATTACTTGAACCTGGCAAACAACAACCTTGAAGGACCAATCCCTGATAATATAAGCTCATGCATGAATCTCATTAGCTTGAATCTATCATCAAACTATCTTAGTGGAGCCATTCCCATTGAACTAGCAAAAATGAAAAACTTGGACACATTGGACTTATCCTGTAACATGGTTGCTGGTCCAATTCCCTCAGCAATTGGGAGCTTAGAGCATCTTTTGAGACTAAATTTTAGCAATAATAATTTGGTTGGATACATCCCTGCTGAGTTTGGAAACTTGAGGAGTATCATGGAGATTGATTTGTCTAGTAATCACCTTGGTGGTTTGATTCCACAAGAGGTTGGCATGCTGCAAAACCTGATATTGCTAAAACTGGAAAGTAATAATATAACTGGGGATGTTTCTTCACTTATTAACTGCTTCAGTCTCAATGTCTTAAACGTATCATACAACAACCTGGCTGGCATTGTACCAACAGACAATAATTTTTCACGATTTTCACCGGACAGCTTCTTGGGTAATCCTGGACTCTGTGGCTATTGGCTTGGTTCTTCGTGCTACTCCACCAGTCATGTGCAGAGATCCTCTGTCTCAAGGTCTGCAATTCTTGGGATTGCTGTAGCTGGGCTTGTTATCCTGCTGATGATCCTAGCTGCTGCTTGCTGGCCACACTGGGCACAAGTTCCCAAAGATGTGTCTTTAAGCAAACCAGATATCCATGCACTACCATCAAGTAATGTTCCTCCAAAGCTTGTAATCCTTCACATGAACATGGCATTCCTTGTGTACGAAGATATAATGAGGATGACTGAAAATTTGAGCGAGAAGTACATTATCGGGTATGGGGCATCAAGCACAGTGTACAAATGTGTACTGAAGAACTGCAAGCCGGTTGCAATAAAAAAATTGTATGCTCACTACCCACAGAGCCTGAAGGAATTCGAGACTGAGCTTGAGACTGTTGGAAGTATCAAGCACCGGAATCTTGTCAGCCTTCAAGGGTATTCCCTATCACCTGCTGGGAATCTTCTCTTCTACGACTACTTGGAAAATGGCAGTCTCTGGGATGTTTTACATGGCTCATCCAAGAAGCAAAAACTAGATTGGGAGGCTAGGCTCCGGATTGCTCTTGGTGCGGCACAAGGTCTGGCTTATCTTCATCATGACTGCAACCCACGGATAATTCATAGGGATGTGAAGTCGAAGAATATCCTTCTAGACAAGGACTATGAAGCACATCTTGCCGACTTTGGTATTGCCAAGAGCTTGTGCACCTCAAAGACACACACATCAACCTATGTGATGGGTACTATAGGCTACATTGACCCTGAGTACGCACGCACATCCCGCCTCAACGAGAAATCGGATGTCTACAGCTATGGCATTGTCCTCCTGGAGCTACTTACAGGCAAAAAGCCAGTCGATAATGAGTGCAATCTCCATCACTTGATCCTATCCAAAGCCGCAGACAACACGGTCATGGAGATGGTCGACCCAGACATCGCCGATACGTGCAAAGATCTTGGCGAGGTCAAGAAGGTGTTCCAGTTGGCGCTCCTTTGCAGCAAGAGGCAGCCTTCTGATCGACCGACGATGCACGAGGTCGTGCGTGTCCTGGACTGCCTCGTCTACCCCGACCCGCCCTCAAAGCCGGCACTGCCACCGGCATTGCCACAGTCGTCCACGGTTCCGAGCTATGTCAACGAGTACGTGAGCCTACGAGGCGGCAGCACGCTCTCCTGTGAAAATTCGTCGAGCGCGTCAGATGCGGAGCTCTTCCTGAAGTTCGGCGAGGTGATATCACAGAACACAGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MTTTTTTRLLLAAILLAVAAADDDGQTLLEIKKSFRNVDNVLYDWAGDGAPRRYCSWRGVLCDNVTFAVAALNLSGLNLGGEISPAIGNLKSVESIDLKSNELSGQIPDEIGDCTSLKTLILKNNQLVGMIPSTLSQLPNLKILDLAQNKLNGEIPRLIYWNEVLQYLGLRSNNLEGSLSPEMCQLTGLWYFDVKNNSLTGIIPDTIGNCTSFQVLDLSYNRLTGEIPFNIGFLQVATLSLQGNNFSGPIPSVIGLMQALAVLDLSFNQLSGPIPSILGNLTYTEKLYLQGNRLTGSIPPELGNMSTLHYLNLANNNLEGPIPDNISSCMNLISLNLSSNYLSGAIPIELAKMKNLDTLDLSCNMVAGPIPSAIGSLEHLLRLNFSNNNLVGYIPAEFGNLRSIMEIDLSSNHLGGLIPQEVGMLQNLILLKLESNNITGDVSSLINCFSLNVLNVSYNNLAGIVPTDNNFSRFSPDSFLGNPGLCGYWLGSSCYSTSHVQRSSVSRSAILGIAVAGLVILLMILAAACWPHWAQVPKDVSLSKPDIHALPSSNVPPKLVILHMNMAFLVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKKLYAHYPQSLKEFETELETVGSIKHRNLVSLQGYSLSPAGNLLFYDYLENGSLWDVLHGSSKKQKLDWEARLRIALGAAQGLAYLHHDCNPRIIHRDVKSKNILLDKDYEAHLADFGIAKSLCTSKTHTSTYVMGTIGYIDPEYARTSRLNEKSDVYSYGIVLLELLTGKKPVDNECNLHHLILSKAADNTVMEMVDPDIADTCKDLGEVKKVFQLALLCSKRQPSDRPTMHEVVRVLDCLVYPDPPSKPALPPALPQSSTVPSYVNEYVSLRGGSTLSCENSSSASDAELFLKFGEVISQNTE</aaseq>

Gene Sequence

<dnaseqindica>1..73#699..840#925..996#1101..1172#1431..1502#1569..1640#1859..1930#2019..2090#2177..2245#2341..2412#2526..2597#2696..2767#3012..3083#3329..3400#3482..3553#3641..3712#3791..3862#4009..4077#4174..4245#4338..4411#4502..4630#4825..5190#5443..5813#6381..6749#ATGACGACGACCACCACCACTCGCCTCCTCCTCGCTGCCATTCTCCTCGCGGTGGCCGCCGCCGACGATGACGGTGGGTGGCCGCGTGCCGTTCCCTTTTGCTCTGCTCGCCTGCGTGCGTTGGCGAGGGAGGGAGGGAGAGGGAAGGATGATGGATTATAGTGGGGAGGGAGGGGGTTGGGTTTGGGTGGCTTCGTGTTTTGGTGTTTTTTTAGTGCTGCGAGTGCGCGCCTTTTGGTCTTTGTTTATGTCTTGCTCCCTATTGGCCGGCGCCGCCTAAGAATGGCCTAATACTAGATTAATCCCAGCCTCCTGTTCGTAGCATCTCTTCTTCTGTTCTTCTTCCCTATCCAGGGGACAGTTGCTGTACTTTTTTTTTGTTTTGTTTTTTAAATGCGGCTTTATTTTTGAACTATTTTTTTTCTGTTTTGTTTCGTTCATGGATAAGGTTTCTATATTGTTCTTGGAGATCAAATGCTCATTTCTGAAATGCCGCCGCTGTTTGTGGAAGTTTAGGGAGTGATTTTTTTTTTGTGTGGGGTTTTTGGTTATCGAGTTTTGGATCCGGAAATGGTTTTAAATTATTTTGGAAGTTATTCTCCGATTCCTCCTCCGAAACCAGATTCCTGTTTCCTCGCGATGTTTGGTACTTCGATTCTGCTGTTTATCAATCTGGTTTGCTCTTGCGTGTTTTCCAGGACAAACGCTACTGGAGATCAAGAAGTCCTTCCGCAATGTGGACAACGTGCTGTACGATTGGGCCGGCGATGGCGCGCCGCGGCGCTACTGCTCGTGGCGCGGCGTGCTCTGCGACAACGTCACCTTCGCCGTCGCGGCGCTGTGAGTTTCCTGCCAACCTATTGCTTGGCTTGCCTGGCTGCAGTGCCCGTGGTTACTGACGTGTTTTCTTGCGGTGGAATGCAGCAACCTCTCGGGGCTCAATCTTGGGGGCGAAATCTCCCCGGCCATCGGGAATCTGAAAAGCGTCGAGTCGATGTACGGTGGCACGTTGTCTCCTGGAATGAAATGTTTCTTTCATTCAGCTGCTTAATTAGTGTGCTCAACTCGTTCTCCCTGTTTGTTTGATTACATATATGCAGCGACTTGAAGTCGAATGAACTTTCTGGGCAGATCCCTGATGAGATTGGCGATTGCACGTCGCTTAAAACTCTGTAAGTGAGATTCAGTTTTGGTTCGCAGTGTTGTTTTGAGGATGTAGAACAGTAGAAGTAATGCGTGCCGCAACCCTCCCCTGTTCTTTTATTCAAGGGACCTGTCCTCTAACAATCTAGGAGGAGATATACCATTTTCCATATCTAAGCTGAAGCACCTTGAGAACTTGTAAGATTTACCCTGCTGAAACTTGGTGGAGGAGAAGTATTTTGCAGCATTTCTTTCATCGTAAGCACTGCTGTTACTTGAATATATAGGATCTTGAAGAACAACCAGCTGGTGGGGATGATCCCGTCGACACTCTCTCAGCTACCAAATTTGAAGATTTTGTAAGTTGCGGCTGAACTGTTCTGAGGGCTTAATTTGGATCAATTCTAATGTGATATATGCCCCAGGGACTTGGCTCAAAACAAGCTAAATGGTGAGATTCCGAGGTTAATCTACTGGAATGAGGTTCTTCAGTACTTGTGAGTACTAAGTAGTCGATGATTCTGTTCCCTACTTTAAAGAACTTCTTTTTTTTGTTTCAGTACTTAAACTGCAGACAATATGTAGGAGCTATTAGTGCTAATCAGATCTAGTTTGTGTAAATTATAGGCGGTTGAACATATGTAATGTAGGGCAAATAGTTCGGTAAGATCATATTGTCATATCCAATTGTGCTAATCTGATTTTCATATGACAGGGGATTACGGAGCAATAATTTAGAAGGAAGCCTCTCTCCTGAGATGTGCCAGTTGACTGGCCTGTGGTACTTGTGAGTGTATTGCTTCCTTTTGTTTATTATTAGCTCTACATGTTTGTTTTCTTTGTTCCTTTCACAAACTTGATTTTGTTTGACTTAGTGATGTGAAGAACAATAGCTTAACGGGTATAATACCAGATACTATTGGGAACTGTACGAGCTTTCAGGTCTTGTATGTACATACCTTCTACTCCTTCTGAATTATATGTCCCCCTTTCTTTGACATGTCAATCATTCCTGACCTTATGGTATTTTTAGGGATCTGTCTTACAACCGGCTCACGGGAGAAATCCCATTCAACATTGGCTTCCTACAAGTGGCTACATTGTATGTGGTAGTCATTTTACTAACAAAAAGAGTATCCAACCTGTCGTAATTAATGAAACCAACTACTTGAACTGCTATGCACTATTTTGTACCAGGTCTTTGCAAGGGAACAATTTCTCTGGCCCTATTCCATCAGTAATTGGCCTTATGCAGGCGCTCGCAGTGCTGTAAGTCCAATGATAATTGATGTGCTTGTCTTAATTTATGGGCTGAGAGTGAGAGGTATTACCATAGCCCTTGAATGCAAGTTTTCACCTGTACCTTCTATTTGTTGATACAGTGATCTGAGTTTCAACCAATTGTCTGGGCCAATACCATCAATACTTGGCAACTTAACATACACTGAGAAACTGTAAGCCTGCCCTTGTGTGTGTGTTTTCCTAGCCTTTGATAAATATAATATTCTTAATTATGTCAAGAAGTTAACATCATAGTATCTTGTTTTCTTAGGTACCTCCAAGGCAATAGGCTAACTGGATCAATACCACCCGAGCTTGGTAATATGTCGACACTTCATTACTTGTAAGCCTCTACCTTTAAAATTTTGTTGCTTCTTGATTGTTAATTGATTAGCGCACTACCCTCTTTTTGAGACAATATCTGGTTTCAGAGAACTGAATGACAATCAGCTGACCGGGTTCATTCCGCCTGAGCTTGGAAAGTTGACGGGCTTATTTGATCTGTATAACTCTACTCATCCTTTATCAATTGATGCTTACCTGGAATGCTAAATCAGTCAGTGGACCATATCATTTGTTTTTCACAGGAACCTGGCAAACAACAACCTTGAAGGACCAATCCCTGATAATATAAGCTCATGCATGAATCTCATTAGCTTGTAAGTTTCATTTGTTCTCCTGAAGTTCTATATCCTCTCCGATGGCAGGGCACTTAACTTTAGCTTTGTAACAGCAATGCTTATGGCAATAAATTAAATGGGACCGTTCCACGTTCATTGCACAAACTTGAGAGTATAACTTATTTGTAAGTGTTATTGGTTTTAGGTGATTTTTCTTCAAGCCTGCTATAAATTTAGTTCTGTTCATAGTGTCTAATGATTTTTGTTTTCATCCTAACTTCTAGGAATCTATCATCAAACTATCTTAGTGGAGCCATTCCCATTGAACTAGCAAAAATGAAAAACTTGGACACATTGTAAGTACCAGAAGTTAATCTGCAATTGCTTTTGAATAAGTGATTCTCATGATATGACGTGTTTGCTGGATATATTTGAAGGGACTTATCCTGTAACATGGTTGCTGGTCCAATTCCCTCAGCAATTGGGAGCTTAGAGCATCTTTTGAGACTGTAAGTTCTATAATATTACTCCTTGTTATAAAAAAATAAAATAAAATACTTGTATCATGTCATGACAGCATTCTCTTATTCCTAAAGAAATTTTAGCAATAATAATTTGGTTGGATACATCCCTGCTGAGTTTGGAAACTTGAGGAGTATCATGGAGATGTAAGTACCTTCTCACCTAAATGCGTTGTCTGCTCTGTACCTTTGGGAGTAATGCAGATTCCTCTTCCTCTGTTTTAGTGATTTGTCTAGTAATCACCTTGGTGGTTTGATTCCACAAGAGGTTGGCATGCTGCAAAACCTGATATTGCTGTAAGTCTATGTTTTACCCTCTATCCTATAAAGTAGTATTGCATGGTTTCAAAAGGCTGTTTGCATTGGACTGCATATTAATTTGAGTATTCTGTTTCTCATTACTGCATATTGATTTACGTGAATTTTTTTTTGTCTTTTTTCAGAAAACTGGAAAGTAATAATATAACTGGGGATGTTTCTTCACTTATTAACTGCTTCAGTCTCAATGTCTTGTAAGTTATACACTTGAAAAGCAATATGAAATGATTTCACACAATTTTTTTTGGCCATGAACCTGTAAGCTTCATACTGATAGTGTGTTACTGCAGAAACGTATCATACAACAACCTGGCTGGCATTGTACCAACAGACAATAATTTTTCACGATTTTCACCGGACAGGTATTTTCCTTGGGGATTAATTGATCGCTTGAAAAAGAACTCGTAATACTTAGGCATCTCAGGCCTCATCAATAATCTGATCTTTAATTCAGCTTCTTGGGTAATCCTGGACTCTGTGGCTATTGGCTTGGTTCTTCGTGCTACTCCACCAGTCATGTGCAGAGATGTCAGTAAAATGTTACAGCTGTTGCGTTGCTCCGAAGTGTAACTTCACACTGATAAACTTTCTAATTTTATATCCTGGATTTTTATGCAGCCTCTGTCTCAAGGTCTGCAATTCTTGGGATTGCTGTAGCTGGGCTTGTTATCCTGCTGATGATCCTAGCTGCTGCTTGCTGGCCACACTGGGCACAAGTTCCCAAAGATGTGTCTTTAAGCAAACCAGGTGATGCATCTGCAGAGGTCCCAGTCCATTGATTTTACCCATCAATTTCGGTAGCTGTTTGGCAAGTGTCCTCTCGTCACACTCAACCTTGCAAATGATCTATTACATGTCTCAGACTATTGCATATGTTCGCCCTCTACTTGATAGATGCATTTGGTTGTTAACAGAGTGATATTATTATTTTCCTGTGATAGATATCCATGCACTACCATCAAGTAATGTTCCTCCAAAGCTTGTAATCCTTCACATGAACATGGCATTCCTTGTGTACGAAGATATAATGAGGATGACTGAAAATTTGAGCGAGAAGTACATTATCGGGTATGGGGCATCAAGCACAGTGTACAAATGTGTACTGAAGAACTGCAAGCCGGTTGCAATAAAAAAATTGTATGCTCACTACCCACAGAGCCTGAAGGAATTCGAGACTGAGCTTGAGACTGTTGGAAGTATCAAGCACCGGAATCTTGTCAGCCTTCAAGGGTATTCCCTATCACCTGCTGGGAATCTTCTCTTCTACGACTACTTGGAAAATGGCAGTCTCTGGGATGTTTTACATGGTAAGTGAATTTTACATGGCAAACAAATACATAGGAACTGTAAGCAGAATAGTTGGTATTTAGAACGATTGTTCTTCTGGTTTGTATAGCCGTTGCCTGTTCATCTGTCAACAAGCACCACCTGATCACTTTCATATCAACTTGTTTGATTGTTTAATATTATTTGGATTAGGATATTTTCATGGAACATAAACAGCTGATAAGATTTCTGCAACTATAGCCTAATTAGCAATTTCTTTATTATTTTAGCAGGCTCATCCAAGAAGCAAAAACTAGATTGGGAGGCTAGGCTCCGGATTGCTCTTGGTGCGGCACAAGGTCTGGCTTATCTTCATCATGACTGCAACCCACGGATAATTCATAGGGATGTGAAGTCGAAGAATATCCTTCTAGACAAGGACTATGAAGCACATCTTGCCGACTTTGGTATTGCCAAGAGCTTGTGCACCTCAAAGACACACACATCAACCTATGTGATGGGTACTATAGGCTACATTGACCCTGAGTACGCACGCACATCCCGCCTCAACGAGAAATCGGATGTCTACAGCTATGGCATTGTCCTCCTGGAGCTACTTACAGGCAAAAAGCCAGTCGATAATGAGTGCAATCTCCATCACTTGGTAACTATTTTTTCATTCGCTTGCTACTGTTTATTTGAAAACTTGTTCCTTTCCTTCACCATATACTCTTGCATTTGAGGTTCAATAAGTGCACAATCATGGGCATTATCAGGTCTGTGTTCCTTCAAGGGGACCACGCATGAATCCTACCATGTGAGTAGATCTATATACACTGTGGCGGACCTGGTAGTGTGTGATTCATTGTATGGCTGGTGAAAGCTCTATCATAACTTGCCAGTGTCCCATAAAGCCTGCCATATTTGTCCCCCGCCTTCAATCATGTGGGTGAACATTTACAGGCAACACACACCTGTCAAAAACTGTAGCTAACTATGACTGTACTAGTTATTTTGATCACTGACATGCTGGTAACTTATCGGAAGAATTTACCCTGTCAATCCTGAACATCTCTTTTTGAAAGAAAACGGCAAAAGGTGAATTAAAATTTGTATTTCTACCAGCCCACAGGTCCAGTACGGAATAGTGCAACTGTAAACAGTCGATTTTAGCGATGAACTTCCTGGTTTGCATGAATGCTGTTTATGCTCATTGGTTGCTTCTCTGCAGATCCTATCCAAAGCCGCAGACAACACGGTCATGGAGATGGTCGACCCAGACATCGCCGATACGTGCAAAGATCTTGGCGAGGTCAAGAAGGTGTTCCAGTTGGCGCTCCTTTGCAGCAAGAGGCAGCCTTCTGATCGACCGACGATGCACGAGGTCGTGCGTGTCCTGGACTGCCTCGTCTACCCCGACCCGCCCTCAAAGCCGGCACTGCCACCGGCATTGCCACAGTCGTCCACGGTTCCGAGCTATGTCAACGAGTACGTGAGCCTACGAGGCGGCAGCACGCTCTCCTGTGAAAATTCGTCGAGCGCGTCAGATGCGGAGCTCTTCCTGAAGTTCGGCGAGGTGATATCACAGAACACAGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009135