BGIOSGA009142

From RiceWiki
Revision as of 03:26, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009142| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009142, complete gene.| tag = OsI_091...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009142

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009142, complete gene.

LocusTag

OsI_09160

Ensembl Transcript ID

BGIOSGA009142-TA

Ensembl Protein ID

BGIOSGA009142-PA

Length

2347

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35080546..35082892

Sequence Coding Region

35080546..35081079,35081127..35082298,35082397..35082892

Genome Context

<gbrowseImage1> name=IndicaChromosome02:35080546..35082892 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:35080546..35082892 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCAAACCACCAGCAACAACAACGCTCGTCCTATGCTGCCTTCTCGCCGTGGCTGCCGCAGCAGCAGCGACATGGATAGGACATGACGATCAGCAAGACAACGACGTGTCCACCTACATCGTGCACGTCATGCCCGCGCACGCGCCACGCCTCGCCACGCACCGCATCGCCCGCGACCACTACGCCCCCTTCCTCTGCGAGCTCCTCCTCCCCCCGCACGTCGCCCGCCCGCCGCCGCGCCTCCTCTACTCCTACGCGCACGCCGCGACGGGGTTCGCGGCGCGGCTGACGGCGCGGCAGGCCGCGCACCTCGAGGCGCACCCCTGCGTCGCCGCCGTGGTCCGCGACGAGGCCTACGAGCTCCACACCACCCTCTCCTCCTCGTTCCTCCGCCTCTCGCCGTCTTCCGGGCTACAGGCGGAGTCGAACAGTGCCACCGATGCGGTGATCGCTGTCATCAACAGTACCATGCGTCCTTCGTATCAGACCCGTCTTTGTCCCCAACACCGCCTCCTACCTTTCGTGGCGAATCTTGTGGGTGCAAAGATGTTCTACGAGGGGTACGAGCGTGCGAGTGGGAAACCGATCAACGAGACGGAGGATTCCAAGTCGCCACTAGACACGACGGGTCATGGCACCCACAGCGCTGCCATTGCAGCTGGCTCTCCTGTGTCGGATGCCAACCTCTTTGGCCTTGCCAATGGCGTTGCCAAGGGCACGGCTCCCGGTGCACGCATCGCCGTCTACAAAGTGTGCTGGAAAATGGGGTGCTTCGGCTCCGACGTCGTCGCCGGCATGGACGAGGCGATCGCCGACGGCGTCGACGTCATCTCCCTCTCGCTGGCTGTCAACCGCAAAAGAACTTTTGCTCAAGATCCCACGGCCATTAGCGGCTTCAATGCTGTCCGTAAGGGCATAGTTGTTGTTGCATCCGCTGGTAGCGGCGGTCCAAAGGAATCAACCGTCACCAACACGGCGCCATGGTTGTTGACAGTCGGTGCATCGAGCATGAACCGCCAATTCCAGACGATCGTTGTGCTCGGCGATGGCCAGACATTTTCTGGCACATCGCTCTATCTCGGTGATACAGATGGCTCCATGAAATCGCTTGTCTTTGGTGGTTTCGCCGGCTCAGCCGCTTGTGAAATCGGGAAACTTGATGCTACCAAAGTCGCTGGCAAGATTGTCCTGTGCGAGGCAGGACAGGCCTTGGATGCGGAGAAAGGAGTCGCCGTTGCTCAGGCTGGTGGATTCGGTGTCATCGTGTCTAGTCGTAGTAGTTATGGTGAGTATGCTAAGGCCACTGCCCATCTCATCCCAGGCACCACGGTGCCTAACGCTGCCGCATTGGAGATCTTGCGATACATGGCCAGGACACCATATCCAGTTGGTAAGATCCTCTTCTTTGGCACGGTGCTCAGCTCGTCGCCGAGGATCGCGTCCTTCTCCGCCCGTGGCCCGAGCCTCGCCGCGCCGGAGATCCTCAAGCCCGACCTTGTCGCCCCCGGCGTCAGCATCCTCGCCGCGTGGTCCGGCCTCGTCTCGCCAACCGAACTCGACGTCGACACGAGGCGCGTCAAGTTCAACATCTTGTCCGGTACATCCGCCGCGTGCCCGCACGTGAGCGGCGTCGCTGCGCTGCTCAAGATGGCACGGCCAAGCTGGACCCCTGCGATGATCATGTCGGCCCTGACGACGACGGCCGGCCTTGACCCGGGGCTCGTCTACGACGCCGGCGTCGACGACTACCTCGACGTCCTGTGCGCGCTCGGCTACTCCGACGAGGATATCGTCGGTATCTTCTTGAGGGACGGAACGATCACCAACTGTTCGACGCGGGCGAGCACCACCGTGGCGGACCTGAACCGCGCGTCCATCTCGGTGGCGGTCAAGGCGTACGGCGACGATATCACGGTGAGACGCACCGTGCGCAACGTCGGCGGCAGCGTCGACGCCGTGTACACCGTCGGCGGGGTGCCACCGCCGGGCACGCAGCTCCGCATCAGGCCGTCGAAGCTGGTGTTCGACGCGGAGCACCAGACGAGGACGTACGACGTCGTCATCCGCACGGTGTCCTCCGGCAGCTTCGACGAGTACACGCACGGTTCCATCGTCTGGAGCGACGGCGCGCACAAGGTGAGGAGCCCCATCGCCGTCACCTGGCCGCCGTCTCAGAGCGCCGCCGTCGCGGCCATTTGA</cdnaseq>

Protein Sequence

<aaseq>MAKPPATTTLVLCCLLAVAAAAAATWIGHDDQQDNDVSTYIVHVMPAHAPRLATHRIARDHYAPFLCELLLPPHVARPPPRLLYSYAHAATGFAARLTARQAAHLEAHPCVAAVVRDEAYELHTTLSSSFLRLSPSSGLQAESNSATDAVIAVINSTMRPSYQTRLCPQHRLLPFVANLVGAKMFYEGYERASGKPINETEDSKSPLDTTGHGTHSAAIAAGSPVSDANLFGLANGVAKGTAPGARIAVYKVCWKMGCFGSDVVAGMDEAIADGVDVISLSLAVNRKRTFAQDPTAISGFNAVRKGIVVVASAGSGGPKESTVTNTAPWLLTVGASSMNRQFQTIVVLGDGQTFSGTSLYLGDTDGSMKSLVFGGFAGSAACEIGKLDATKVAGKIVLCEAGQALDAEKGVAVAQAGGFGVIVSSRSSYGEYAKATAHLIPGTTVPNAAALEILRYMARTPYPVGKILFFGTVLSSSPRIASFSARGPSLAAPEILKPDLVAPGVSILAAWSGLVSPTELDVDTRRVKFNILSGTSAACPHVSGVAALLKMARPSWTPAMIMSALTTTAGLDPGLVYDAGVDDYLDVLCALGYSDEDIVGIFLRDGTITNCSTRASTTVADLNRASISVAVKAYGDDITVRRTVRNVGGSVDAVYTVGGVPPPGTQLRIRPSKLVFDAEHQTRTYDVVIRTVSSGSFDEYTHGSIVWSDGAHKVRSPIAVTWPPSQSAAVAAI</aaseq>

Gene Sequence

<dnaseqindica>1..534#582..1753#1852..2347#ATGGCCAAACCACCAGCAACAACAACGCTCGTCCTATGCTGCCTTCTCGCCGTGGCTGCCGCAGCAGCAGCGACATGGATAGGACATGACGATCAGCAAGACAACGACGTGTCCACCTACATCGTGCACGTCATGCCCGCGCACGCGCCACGCCTCGCCACGCACCGCATCGCCCGCGACCACTACGCCCCCTTCCTCTGCGAGCTCCTCCTCCCCCCGCACGTCGCCCGCCCGCCGCCGCGCCTCCTCTACTCCTACGCGCACGCCGCGACGGGGTTCGCGGCGCGGCTGACGGCGCGGCAGGCCGCGCACCTCGAGGCGCACCCCTGCGTCGCCGCCGTGGTCCGCGACGAGGCCTACGAGCTCCACACCACCCTCTCCTCCTCGTTCCTCCGCCTCTCGCCGTCTTCCGGGCTACAGGCGGAGTCGAACAGTGCCACCGATGCGGTGATCGCTGTCATCAACAGTACCATGCGTCCTTCGTATCAGACCCGTCTTTGTCCCCAACACCGCCTCCTACCTTTCGTGGCGAATGTGTGTCGACTCCAGAGTTTGATGCTAGCATCTACTGTAACAACAAGCTTGTGGGTGCAAAGATGTTCTACGAGGGGTACGAGCGTGCGAGTGGGAAACCGATCAACGAGACGGAGGATTCCAAGTCGCCACTAGACACGACGGGTCATGGCACCCACAGCGCTGCCATTGCAGCTGGCTCTCCTGTGTCGGATGCCAACCTCTTTGGCCTTGCCAATGGCGTTGCCAAGGGCACGGCTCCCGGTGCACGCATCGCCGTCTACAAAGTGTGCTGGAAAATGGGGTGCTTCGGCTCCGACGTCGTCGCCGGCATGGACGAGGCGATCGCCGACGGCGTCGACGTCATCTCCCTCTCGCTGGCTGTCAACCGCAAAAGAACTTTTGCTCAAGATCCCACGGCCATTAGCGGCTTCAATGCTGTCCGTAAGGGCATAGTTGTTGTTGCATCCGCTGGTAGCGGCGGTCCAAAGGAATCAACCGTCACCAACACGGCGCCATGGTTGTTGACAGTCGGTGCATCGAGCATGAACCGCCAATTCCAGACGATCGTTGTGCTCGGCGATGGCCAGACATTTTCTGGCACATCGCTCTATCTCGGTGATACAGATGGCTCCATGAAATCGCTTGTCTTTGGTGGTTTCGCCGGCTCAGCCGCTTGTGAAATCGGGAAACTTGATGCTACCAAAGTCGCTGGCAAGATTGTCCTGTGCGAGGCAGGACAGGCCTTGGATGCGGAGAAAGGAGTCGCCGTTGCTCAGGCTGGTGGATTCGGTGTCATCGTGTCTAGTCGTAGTAGTTATGGTGAGTATGCTAAGGCCACTGCCCATCTCATCCCAGGCACCACGGTGCCTAACGCTGCCGCATTGGAGATCTTGCGATACATGGCCAGGACACCATATCCAGTTGGTAAGATCCTCTTCTTTGGCACGGTGCTCAGCTCGTCGCCGAGGATCGCGTCCTTCTCCGCCCGTGGCCCGAGCCTCGCCGCGCCGGAGATCCTCAAGCCCGACCTTGTCGCCCCCGGCGTCAGCATCCTCGCCGCGTGGTCCGGCCTCGTCTCGCCAACCGAACTCGACGTCGACACGAGGCGCGTCAAGTTCAACATCTTGTCCGGTACATCCGCCGCGTGCCCGCACGTGAGCGGCGTCGCTGCGCTGCTCAAGATGGCACGGCCAAGCTGGACCCCTGCGATGATCATGTCGGCCCTGACGACGACGGCGTACGTCCAGGACAGCTCCGGCAATGCCATCGCTGACATGGCCACGGGCAAGCCGGCCGGGCCGTTCGAGCTCGGGCCGGCCATGTCGACCCGAACAGCGGCCTTGACCCGGGGCTCGTCTACGACGCCGGCGTCGACGACTACCTCGACGTCCTGTGCGCGCTCGGCTACTCCGACGAGGATATCGTCGGTATCTTCTTGAGGGACGGAACGATCACCAACTGTTCGACGCGGGCGAGCACCACCGTGGCGGACCTGAACCGCGCGTCCATCTCGGTGGCGGTCAAGGCGTACGGCGACGATATCACGGTGAGACGCACCGTGCGCAACGTCGGCGGCAGCGTCGACGCCGTGTACACCGTCGGCGGGGTGCCACCGCCGGGCACGCAGCTCCGCATCAGGCCGTCGAAGCTGGTGTTCGACGCGGAGCACCAGACGAGGACGTACGACGTCGTCATCCGCACGGTGTCCTCCGGCAGCTTCGACGAGTACACGCACGGTTCCATCGTCTGGAGCGACGGCGCGCACAAGGTGAGGAGCCCCATCGCCGTCACCTGGCCGCCGTCTCAGAGCGCCGCCGTCGCGGCCATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009142