BGIOSGA009146

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Revision as of 03:26, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009146| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009146, complete gene.| tag = OJA1208...")
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Gene Name

BGIOSGA009146

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009146, complete gene.

LocusTag

OJA1208D02.5

Ensembl Transcript ID

BGIOSGA009146-TA

Ensembl Protein ID

BGIOSGA009146-PA

Length

3761

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35138728..35142488

Sequence Coding Region

35138728..35138868,35139265..35139339,35139808..35139923,35141068..35141200,35141789..35142002
,35142082..35142488

Genome Context

<gbrowseImage1> name=IndicaChromosome02:35138728..35142488 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:35138728..35142488 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGATGGGTGTGGTGTCAAGGGAGGTATTGCCTGCATGCGAGAGGCTTTGCTTCCTTTGCCCGTCATTGCGCACGAGGTCTCGGCATCCGGTCAAGCGATACAAGAAGTTGCTCTCAGAAATCTTCCCTAAGTCACAGGATGAAGAACCCAATGACCGAAAGATCGGCAAATTGTGCGAATATATTTCGAGGAATCCTTTGCGTGTTCCAAAGATTACAGTTTATTTAGAGCAAAAATTCTACAAGGAATTGAGAGTTGAGCATTTTGGGTCAGTGAAAGTTGTCATGGCAATTTACCGAAAGGTGATATGTTCTTGTCAGGAGCAACTATGTGGCGGCGTCCGCAAGGACGACAACGACGATGAGGAGGGAGGCACGTACGGCGGCAACGGTAAGGGAGAACAAGCGTTTGTCGTCCTCATGGTGTCATCAGCGGCCGCGTCGGCCTCCACCTCCACGACGGCCTCCACCTCCGCGGCGGTGTCCGGCTCGGTCCCCGTGGGGCTGGCGGCTAAGAACCCGAAGCTGATGCATGAGGGCGCGCAGGACCTCAACCTGGCGTTCCCTCATCACCATGGTCATGCCCTGCAGTCACCGGAGTTCACGGCATTCCCGAGCTTGAAGAGCAGCACCATGTGCAACCCCGGAGGCAACCTGGCGGCGGCGAACGGCGCCGATGGGGCCGCTAGGGATGCCGGTGGAATATGCAGTTGTGGGGTTCCATCTTGGCGAGTTCCGCATGCCGCCACCGCCACAGTAGCATCAGCAACAAGCTCAGACTGCGCTCGGTTTCTCCCAGGACACGCATGGCGGGTGCAGGCGGCAGCTCCAGGGTGTTTGGCGCGTGCAGCGCTGGGTTGCAAGAGAGCGCGGTGGGGCAGGTTGTTGTTCCCGTTCGAGGACCTGAAGCTGGTGGCGAGCGCCACGGCTAGCGACGCAAACAGCAGCGGCGATCATCAGTACGACCACGGCAAGAACCAAGGTGGCGGAGGCGGCGTCATCGGTGGCCATGAGACCCCAGGGTTCTGGAATAGCAGCATGCTCGGCAACGGAAGCAGCAATGGCGGCGGCGATTCTTGGTAA</cdnaseq>

Protein Sequence

<aaseq>MTMGVVSREVLPACERLCFLCPSLRTRSRHPVKRYKKLLSEIFPKSQDEEPNDRKIGKLCEYISRNPLRVPKITVYLEQKFYKELRVEHFGSVKVVMAIYRKVICSCQEQLCGGVRKDDNDDEEGGTYGGNGKGEQAFVVLMVSSAAASASTSTTASTSAAVSGSVPVGLAAKNPKLMHEGAQDLNLAFPHHHGHALQSPEFTAFPSLKSSTMCNPGGNLAAANGADGAARDAGGICSCGVPSWRVPHAATATVASATSSDCARFLPGHAWRVQAAAPGCLARAALGCKRARWGRLLFPFEDLKLVASATASDANSSGDHQYDHGKNQGGGGGVIGGHETPGFWNSSMLGNGSSNGGGDSW</aaseq>

Gene Sequence

<dnaseqindica>1..141#538..612#1081..1196#2341..2473#3062..3275#3355..3761#ATGACGATGGGTGTGGTGTCAAGGGAGGTATTGCCTGCATGCGAGAGGCTTTGCTTCCTTTGCCCGTCATTGCGCACGAGGTCTCGGCATCCGGTCAAGCGATACAAGAAGTTGCTCTCAGAAATCTTCCCTAAGTCACAGGTGAAACCCGCTGTAGATGTTCATGGATAAATTAGGCTTTGTTCTGTATCCTACATTTGCACATTATGGATCATATTGTGTAGTTTGAGGTTTGCTTATTTCATCCTGATCGATTTGTTGGTTCCTTAGGTTCCTTCTGTATCATACTCCGACAGTAGTTGCTTATTTTAGTATCTCTCGTTGTAGTACAGATTGGTACTAATAACGCAATTACAAAAAGAAGAAAATCTATGTTCGGCAAGTTCTACTATTGTATATCAGTATATGTGCACAGTTAAAAGTTAAAATACATCCCCATATAAACCTATCTGGGGAAGCGAGAGTAACACTCCTATAAATGTTTTCTTTTTTTTTCTTTTTTTGGAAAAGGCTATAAATGTTGTCTTGTTCTTTTAGGATGAAGAACCCAATGACCGAAAGATCGGCAAATTGTGCGAATATATTTCGAGGAATCCTTTGCGTGTTCCAAAGGTGTAATTCTCTTTCTCATCTCTTTTATATATTATTTCACTGCCATGATTCATCTAATAATTTTAGAAAGTGAATTATTATCGAGTGCTTATTAATCATCAGAGGAAGCTGCAGGGCATGCCTCATTTTCTGTTCATATCTATATCCCTCCCAAAAGTCAATCAATTGTGCAACATGCTGACTTTCTTAGTTAAAACCAGTGGGTACTTTTCATACAGAACATTTGGGCATGCCTTTTTTCACATATCTAGCTTTATTCTGATGGTTTATGTTCAATCTGAAGCAAGGTATATCCTAATTTTCTTCTAGAAAAAAGATTTATCCTACTTTAAATCTGTAAAAATATCGTATTTTATAGAAAAACCAATGATGTATTATCAAAATTTAAGATTTTGGAGTTACTTCCTTCCCCTATTCATGAATTTGATCCTTTTGTCTTCATTGAAAATTGTTCTTGCACTTTGACAGATTACAGTTTATTTAGAGCAAAAATTCTACAAGGAATTGAGAGTTGAGCATTTTGGGTCAGTGAAAGTTGTCATGGCAATTTACCGAAAGGTGATATGTTCTTGTCAGGAGCAACTGTAAGTTATTTTTGCTTATAAACATAGTTACATACTTACATGAGCTCCCTTGAATATATTGCTGAAGGTTCCATAGGCAATGCGTTGGATTTCCGTAATATCCATCTCTTAACAATTTCATCATACTGCAATCTATTATATAATTAAAGGAATAGAAAAAGGAGCTTCCACGTTCGCTCTCATAGCCTAGAAATTCTTACATTAATCGGAGAAAAAGAAAACAGAGTCCATATAGAAATACAATTTAGAAATAGCTGAAATTCGGAATTAAAAAATAAGAAATATTAGAAGAGGAGACTAGAGTCCATATAGAAATACACTTTAGAAATAGTTGAAATTCGGAATTAAAAAATAAGGAATATTATAAGAGGAGTATAGAGTCCATATAGAAATACAATTAGGGAATAATAGAAATTATGAATTAAAAATAAGGAATATTAGAAGTAGAGTATATAGTCTACATAGAAATACAATTAGGAAATAACCAAAATTCGGAATTAAAAATAAGAAATATTATAAGTAGAGTATAGAGTCCATATAGAAATACAATTAAGAAAAAAAATAGAAATTTGGAATTAAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTTCATATTAGAATTTAAAACCAACTAAAATTCGGAATAAAAAGGAGCCTCCACGTTCACTCTCATGGCCTAAAAATTCTCACATTAATAAGAGAAAAAGAAAAAGCAGAGTCCATATAGAAATACAATTTAGAAATAGCTGAAATTCAGAATTAAAAAATAAGGAATATTAGAAGAGGAGACTAGAGTAGTTATTACACATTAGTAGTTTTGAAAAGTTATTGCAAAATTTAAAAGAGTAAAGTACACGGCCGGTCCTTAAAGTTGGAGCGATGTGTCACTTAGGTCCATAATCTAGGAAAATCGTCATTCGGGTCCGTGATCTTGTTTAAGTGAATCATTTAGGTCCAAAGCGCCTTTGACCAGGTTGACTGGCTTACGTGGCCGTCCACGGTGACAGCATATTTGCATTTTAGCCCCCCGCATCTTGGCTCTCCCATATACGATCCAACCATTCTCCCCCAAATCCTCCTCGGCTCCTCCTGTGTGATTTCTAGGGTTAGCGATTGCAACGGCGATAGGGTGGCGGTGTAGATGTGGCGGCGTCCGCAAGGACGACAACGACGATGAGGAGGGAGGCACGTACGGCGGCAACGGTAAGGGAGAACAAGCGTTTGTCGTCCTCATGGTGTCATCAGCGGCCGCGTCGGCCTCCACCTCCACGACGGTGTCTAGCTCGGTCCCCGTGGGCCTGGCGGCTAAGAACCTGAAGTTGATGCACAAGGGCGCGTAGGACCTCAACCTGGCGTTCCCGCATCACCACGGCCGCGCCCTGCAGTCGCCGGAGTTCACAGCGTTCCCGAGCTTGGAGAGTAGGAACATGTGCAACCCCGGAGCGCAACATGGCGGTGGCGAACGGCGTTGGTGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCGGGTCCACGATCTTGTTTAAGTGAATCATTTAGGTCCAAAGCACCTCTGACCGGGTTGACTGGCTTACGTGCCCGTCCACGGAGGCAGCATATTTGCATTTTAGCCCCCCCACATCTTGGCTTCCCCATTTCCAATCCAACCATTCTCCCCGAAATCCTCCTCCTGTGTGATTTCTAGGGTTAGCGATTGCAGCGTCGATTGGGGTGGCGGTGGAGACGTGGCGGCGGCCGTGAGGACGACAACGATGAAGAGGAGGGAGGCGCGTACGACGGCAACGGCACGGGAGAACAAGCGCTCGTCGTCCTCATGGTGTCGTCGGCGGCCGCGTAGGCCTCCACCTCCGCGGCGGTGTCCGGCTCGGTCCCCGTGGGGCTGGCGGCTAAGAACCCGAAGCTGATGCATGAGGGCGCGCAGGACCTCAACCTGGCGTTCCCTCATCACCATGGTCATGCCCTGCAGTCACCGGAGTTCACGGCATTCCCGAGCTTGAAGAGCAGCACCATGTGCAACCCCGGAGGCAACCTGGCGGCGGCGAACGGCGCCGGTGGCAGGGGCAGCGTGGGCGCGTGTTCTCGGCGATGGAGTTGCTGAGGAGCATCGGCTACTACGTTCCTCTGCCTCAGATGGGGCCGCTAGGGATGCCGGTGGAATATGCAGTTGTGGGGTTCCATCTTGGCGAGTTCCGCATGCCGCCACCGCCACAGTAGCATCAGCAACAAGCTCAGACTGCGCTCGGTTTCTCCCAGGACACGCATGGCGGGTGCAGGCGGCAGCTCCAGGGTGTTTGGCGCGTGCAGCGCTGGGTTGCAAGAGAGCGCGGTGGGGCAGGTTGTTGTTCCCGTTCGAGGACCTGAAGCTGGTGGCGAGCGCCACGGCTAGCGACGCAAACAGCAGCGGCGATCATCAGTACGACCACGGCAAGAACCAAGGTGGCGGAGGCGGCGTCATCGGTGGCCATGAGACCCCAGGGTTCTGGAATAGCAGCATGCTCGGCAACGGAAGCAGCAATGGCGGCGGCGATTCTTGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009146