BGIOSGA009147

From RiceWiki
Revision as of 03:27, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009147| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009147, complete gene.| tag = OJ1293_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009147

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009147, complete gene.

LocusTag

OJ1293_A01.37

Ensembl Transcript ID

BGIOSGA009147-TA

Ensembl Protein ID

BGIOSGA009147-PA

Length

4842

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35163623..35168464

Sequence Coding Region

35163623..35164282,35167217..35167610,35167692..35167762,35167925..35168049,35168257..35168464

Genome Context

<gbrowseImage1> name=IndicaChromosome02:35163623..35168464 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:35163623..35168464 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGTTCACATGGATTTTCTACAAAAGGCGGAGATGCAGGGTCAAAATTACCAAGTACAGTTACCACCCTAAATCCAAATGCAGCAGAATTTGTCCCTTCAACTTTTAGGTCGCCTTTTGGAAGTAGAACAGTTGCGGATGTAAGTAAACCAGATTTTAAGGGGCTCTCTGGTAAAACGAACCTTGGTAGGTCGGAATCATCAAAATCTAATAACTCGGATGATGAAACACACCAGTTTTGGCATAGACAGCTTCCTGATGATATTATTCCAGACTTCAGTGATATGGAAAAAGTTGAACAGCAACATGGAGAATTGTCATTTTCTGGATTGTCATTGAATGCACCCCCTTTCTTTGGCACAGCAGCCAGCAACTTGTCGAGAGAGCATCATGGGTTATTGTCTCAAGCAGGCAAGAATCTTGACCTGGGGCACAATGATTTGTATTATGATGAGAATTCAGGTTCAAACAGTGGGAAGCAAAATCATGCAGATAACCTATGTTATACTAATGGGAAGCTTGACCTCCTTTATGATCATGACCCACTTGAGTATTTAGCATCCCAGTTTCCTGGTTTTTCTGTGGAGAGCCTTGCTGAGTTGTACTGTGCTAATGGTTGCGACTTCGACCTTACTGTTGAAATTCTCACTCAGTTAGAGATGCAAGTTGATGCTAGCTCCTGTCAGAATCTGAATCTGGCCCCAAATACACCAAACATTGGCACAGGAAACTTCCCTGTACTACCTGGAACAGAAGACCTTAATTGTTTGTTTGAAGGCAATGTAGGTGCCCATGGAATTACAAACAGACACAACTCTTCAACAATGTCTAGGACTGGAGATTTTGTTTCAGCTATTCAAAGACTTGCATTGCAGGATGCTGGCCACATGAAGTTTAAAAATGAAAGTCCCAAGTATGCTAATGGTCTTTTGAGTATTGTTGCGCGGAAACAGTATGGCTGTGATACAAGGTCTTCCTTAGGAAACAAGTTCCTTAAGGCCAATAGTAATGTTCACTCAGCCCCAGTCAGTCTAAAGACTGGTGATGCCATGGCAAGCATGTGCTCAGAATCAAGGGGGGAAGCTGGTGATTTTGCCCGCATACGCAATACATGTTTTGAACAAGCCACGCAAGCTTATATGATGGGAAACAAAGCGTTAGCAAAGGAACTGAGCATGAAGGGACAGTTGTACAACCTGCAAATGAAGGCAGCTCATGAGACAGCTAGGGAAGCTATTTATCAGCAAAGGAACCCATTTTCATCTGAACAAGGCCAGGACCGTCTGATCGACTTGCATGGGCTTCAGGTGAGCGAAGCCATCCAGGTTGTGAAGGCTGAGCTTGCCCTCCTGATGGGTGCTACAAGGTCAGCTGGAGAAGGCACAGATCATGATCTGCATTGGAACAGGACACCACACCAAGGGCTCTCGCGAGGCAAGGTTGCCGGACGCCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MSSHGFSTKGGDAGSKLPSTVTTLNPNAAEFVPSTFRSPFGSRTVADVSKPDFKGLSGKTNLGRSESSKSNNSDDETHQFWHRQLPDDIIPDFSDMEKVEQQHGELSFSGLSLNAPPFFGTAASNLSREHHGLLSQAGKNLDLGHNDLYYDENSGSNSGKQNHADNLCYTNGKLDLLYDHDPLEYLASQFPGFSVESLAELYCANGCDFDLTVEILTQLEMQVDASSCQNLNLAPNTPNIGTGNFPVLPGTEDLNCLFEGNVGAHGITNRHNSSTMSRTGDFVSAIQRLALQDAGHMKFKNESPKYANGLLSIVARKQYGCDTRSSLGNKFLKANSNVHSAPVSLKTGDAMASMCSESRGEAGDFARIRNTCFEQATQAYMMGNKALAKELSMKGQLYNLQMKAAHETAREAIYQQRNPFSSEQGQDRLIDLHGLQVSEAIQVVKAELALLMGATRSAGEGTDHDLHWNRTPHQGLSRGKVAGRP</aaseq>

Gene Sequence

<dnaseqindica>1..660#3595..3988#4070..4140#4303..4427#4635..4842#ATGAGTTCACATGGATTTTCTACAAAAGGCGGAGATGCAGGGTCAAAATTACCAAGTACAGTTACCACCCTAAATCCAAATGCAGCAGAATTTGTCCCTTCAACTTTTAGGTCGCCTTTTGGAAGTAGAACAGTTGCGGATGTAAGTAAACCAGATTTTAAGGGGCTCTCTGGTAAAACGAACCTTGGTAGGTCGGAATCATCAAAATCTAATAACTCGGATGATGAAACACACCAGTTTTGGCATAGACAGCTTCCTGATGATATTATTCCAGACTTCAGTGATATGGAAAAAGTTGAACAGCAACATGGAGAATTGTCATTTTCTGGATTGTCATTGAATGCACCCCCTTTCTTTGGCACAGCAGCCAGCAACTTGTCGAGAGAGCATCATGGGTTATTGTCTCAAGCAGGCAAGAATCTTGACCTGGGGCACAATGATTTGTATTATGATGAGAATTCAGGTTCAAACAGTGGGAAGCAAAATCATGCAGATAACCTATGTTATACTAATGGGAAGCTTGACCTCCTTTATGATCATGACCCACTTGAGTATTTAGCATCCCAGTTTCCTGGTTTTTCTGTGGAGAGCCTTGCTGAGTTGTACTGTGCTAATGGTTGCGACTTCGACCTTACTGTTGAAATTCTCACTCAGTTAGAGGTGATCTCCTAATCTAGTCCTTATAATTAAATATTAATATAAGGAAAATAAATCTGTAAAATATTCTTGTCTTGATAGCCAGTTGTGCACCCATCATTCGCAACATTGTGGTGTCCCGTATTAATTGCTTTGCTGGGATGCAGAGTTGGGTATTATAATGTAGTGTTCTATTACTTTGCTTTGACTGGTGCTAACAACTTGGACATCTTCACTAAGTGAGAATAATGACTAAAACTAGTATAATGTTCACTCAACTTCCGTTTGCTCATCTATTAGCTGCTGCATTAGGCTGTCAGTACAAAGCACAAACTGTATGTATGAATAATTCGTGCTATACTGCTATGCATTAGTATTAGAGCTTTGTGTTGCTATCTTATTGTTTTAGCCTCTTTTGACCTGTAGGCAGATCGTTTTGTTTTAAAGTTATTCTTTTTTCAAGTAAAAGTTTTAAAACTTCTGCTTGGTACTTATAGATGGGACATTACATTTTCTGTGTAACAGTACAAAGTGTTAGAATTTCAATGGTTACTCTCATTGAGAAGAGGATGGCACTCGAGATGGGGCAATTTTCTGGTTTTCTTCATTCACTAAACACAAAAGCCATGTCCTCCCAAAGAGGATTGGATACATATTTATAGCTGCTTGTAGCAGCCATGCAGCCATGCTAGTCTAAGAGGGTGCTGTCAGCATCCCAACAAACTGTCCTAGAGCAGAGCATCCCAACAAACTGTCCTAGAGCATCTCAACAAACTGCTGTCCTAACTGTCCTAGAGCATCCAAACTGAAAGTAGAGATGCTGTCCTAGAAAGCTGAAAAGCAGGAAAAAAGGCACCACAAGACCAAGACCAACCAGCCAAGACTTATTCCTACATTCTCCCCCTAAGTCTTGTGCGCCGTCTTGTGGGAGAGTTGAGCCATCCCGATCCGGGAGCAAAGCTCAAGGAACTTGATCCTCCCAAGGGGTTTGGTGAGCAAATCCGCAAGCTGGTCCTTGGTGTTGATGTAGCTCGCCTTGATGCTCCCTTCCTCCAAGTAGCTTCGGATGAAATGGTACCTCACTCGGATGTGCTTGCTCCGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGTGATGGGCCCCGAGAGAGGCCGTGGCTCATCACCATCGACGACCTTGAGGCGACCTAACGCCTCCTCGATCGACATCGTGGAGAGGTCCAGCAGAGATTCAATCGAGCGAGCGATCTGCCTGTACTTCTCAGGGACGCAGCGGAAGAGCTTCTCGACAGCTCTCTCCTCGTCGTAGGTGTCGTCGCCGTACTGCACCATTTTCTGCAAGAGAGTGTTGAGACGGAGAGCAAAGTCATCAACATCCTCACCTGGCTTGAAGGCCAGGTTCTCCCACTCCTTGCGGAGTGCCTGCAGTGTGGACTTGCGGGCGCGGTCGCTGCCGATGCGTGCCGCAGCGATGGCGTCCCAGGCCTCCTTGGCAGTCCGCTTCTGGGAAAGCGAGAACTGCATCTCGGGCGGAACTGCAGCGATGAGGGCATCCAGTGCCCGCCGATCCTCGTCGTAGTCGACGTCACCGTACCGGACTGCCTCCCACATGTGCCGCACCTGGAGCCTCACCCTCATCACCGCGGCCCACTCGATGTAGTTGGTTTTGGTGAGGGTAGGCCACCCACCGCCGGGACCAAAATCCCTGACCACCGTCTGGACGCCGTGGTGACCATGGCGCCGGTCAGGGGAGAGGGAGCCGTGCTGCCTGCGAGGGCCGCGTGCGGGCTCCGGGCTGCCGCCGGCACGCCCGCGCCCGTCTGGGTTCCCGTCGGCGGGCGCGCGGTCCCTTGGGCCGCCGCCGCCGCCGTGGAGGTGGGCTGCTGCCCACCGCTCTGCTCGCTCCCGTGCCCTTCCTCTTGCCAGCTCCTCAAGCTCCCTGTCGGCGGTGATGTCGCCGGCGATGGAGCCGTTGATGCTGCTGCGCAAGGTCTCAACCTCTACCTCCGCCGCACGTGCCGCATCTTCCGCCGCCTCCGCCTCCGCCTCCGCCTGGCTGCTGCCAACTCCGCTGCCGCCAGTCTGGCCGCCCTAGCTGCTGCTGCAGCGGTCTGAGCCGTTGCTCGCCTGCGCTCTTCTGCTGCGGCGAGCTCGGCGTCCTGCTGACGCCGAGTGCTCGAGGCGACCGAACGCCGAGACCGAGCGTCGGACATGGCGCACCTCCGGGGGGCTGCTGTGTGGAGAGGGGGAAGGGAAAGGGGAAGGAGGGGCAACCGGTGCTGCTGCTGCTGCTGCTGGCTGAGAGCTCAACCGAGCTTGGGAAGGGGTGGAACAAGAGATGTTTAGCCTACAGGAAAGTGTGGCTCTGATACCAGATGTTAGAATTTCAATGGTTACTCTCATTGAGAAGAGGATGGCACTCGAGATGGGGCAATTTTCTGGTTTTCTTCATTCACTAAACACAAAAGCCATGTCCTCCCAAAGAGGATTGGATACATATTTATAGCTGCTTGTAGCAGCCATGCAGCCATGCTAGTCTAAGAGGGTGCTGTCAGCATCCCAACAAACTGTCCTAGAGCAGAGCATCCCAACAAACTGTCCTAGAGCATCTCAACAAACTGCTGTCCTAACTGTCCTAGAGCATCCAAACTGAAAGTAGAGATGCTGTCCTAGAAAGCTGAAAAGCAGGAAAAAAGGCACCACAAGACCAAGACCAACCAGCCAAGACTTATTCCTACACAAAGTTGACCCTTAAAGCTAGAGCATATCTATATTTAACTGTACATATTTTTTGTCTTACATTTTTTAAAACCTTTTAGTGCATGTTGTGTTCTGGAGATTTTGTGGCATATATATGTAGGCTGGGATTTTCCCATTCTCTTAAAAAAAAATGCAGTACTTGCACGCAAATCCGACCTTTTCTTTTGATTGCAGATGCAAGTTGATGCTAGCTCCTGTCAGAATCTGAATCTGGCCCCAAATACACCAAACATTGGCACAGGAAACTTCCCTGTACTACCTGGAACAGAAGACCTTAATTGTTTGTTTGAAGGCAATGTAGGTGCCCATGGAATTACAAACAGACACAACTCTTCAACAATGTCTAGGACTGGAGATTTTGTTTCAGCTATTCAAAGACTTGCATTGCAGGATGCTGGCCACATGAAGTTTAAAAATGAAAGTCCCAAGTATGCTAATGGTCTTTTGAGTATTGTTGCGCGGAAACAGTATGGCTGTGATACAAGGTCTTCCTTAGGAAACAAGTTCCTTAAGGCCAATAGTAATGTTCACTCAGCCCCAGTCAGTCTAAAGACTGGTGATGCCATGGGTAATATTCTCATCCAGACATTTTGATTTCCGACCATGCTCCAGTTATGGATTGATAGCCTGCATTTATGCTACTGTCCAGCAAGCATGTGCTCAGAATCAAGGGGGGAAGCTGGTGATTTTGCCCGCATACGCAATACATGTTTTGAACAAGTAAGCACTCTTAAATTGCATGTTCATCTTGCACAATGTATTCATGGCATCATTTTGTTTACTTGCTTTGAGTTTTCTTGTGTTGACTACCTCCATTTATTGATCACTGTCCTTTGATCTAGTGGAATGTTTATTTTGGATGATTGGAATATTTTCTGGCAGGCCACGCAAGCTTATATGATGGGAAACAAAGCGTTAGCAAAGGAACTGAGCATGAAGGGACAGTTGTACAACCTGCAAATGAAGGCAGCTCATGAGACAGCTAGGGAAGCTATTTATCAGCAAAGGTGGATTAACTCCCTGATAACCAATTGACATGACCTTAACCTTTCATAAATAAAAGTATTTTTCAACCTGCCAACTTACTGACCACTAACAAAATACCAGGACCTGGACTGCACATTGTATTCATCTTTTCTCCTCTTGCATACAAGTATCTTTTCGCACTCTAAAGGCGCATCTAGTTTTTTTTAGCTTCCCCTGCTTCGTTGCAGGAACCCATTTTCATCTGAACAAGGCCAGGACCGTCTGATCGACTTGCATGGGCTTCAGGTGAGCGAAGCCATCCAGGTTGTGAAGGCTGAGCTTGCCCTCCTGATGGGTGCTACAAGGTCAGCTGGAGAAGGCACAGATCATGATCTGCATTGGAACAGGACACCACACCAAGGGCTCTCGCGAGGCAAGGTTGCCGGACGCCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009147