Os12g0604600

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Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0604600| Description = Similar to GTP-binding protein-like| Version = NM_001073750.1 GI:115489461 GeneID:4352733| Length = 8311 bp| Defini...")
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Gene Name

Os12g0604600

Description

Similar to GTP-binding protein-like

Version

NM_001073750.1 GI:115489461 GeneID:4352733

Length

8311 bp

Definition

Oryza sativa Japonica Group Os12g0604600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25735067..25743377

Sequence Coding Region

25735267..25735420,25736358..25736424,25736663..25736765,25737282..25737352,25737486..25737549
,25737634..25737699,25737828..25737875,25737959..25738021,25738107..25738163
,25738282..25738440,25738814..25738882,25738958..25739049,25739426..25739504
,25739770..25739935,25740327..25740451,25740584..25740846,25740926..25741022
,25741118..25741279,25741367..25741471,25741613..25741707,25741795..25741891
,25742695..25743057

Expression

GEO Profiles:Os12g0604600

Genome Context

<gbrowseImage1> name=NC_008405:25735067..25743377 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25735067..25743377 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgaagcggcggcggcggaggcggtgcagctgatcgacggcgagggggagttcgcggccgactccgcggagcgcttcatggcggccgcgggcgtcgccggctgcggcctctcctacgccgtcgtctccatcatgggaccccagagcagcggaaagagtacgttgctgaaccaactctttggaactaattttagggagatggatgcgttcaggggaaggagtcaaactaccaaaggtatctggatagcacgatgtgttggtgttgagccgtgtactgttgtgatggatttggagggtactgatggaagagaaagaggagaggacgacactgcatttgagaagcaaagttcgttgtttgctcttgcaatttcagacatagttctaattaacatgtggtgccatgatattggccgggaacaagctgccaataagcctcttctaaaaacagtatttcaggtcatgatgcgtttgttcagtccccgaaagacaacactattatttgttatacgtgataaaaccaggactccacttgagcatctagaaccagttctgagggaggatattcaaaagatatggaactctgttgctaagccagaggcgcacaaagacacccctatcagtgaatttttcaatgtgcaagtcactgcattgcccagttttgaagaaaaagaagaacaattcagagagcaggttcaacaacttaggcagagattttcaaattcaattgcaccaggaggtcttgcaggtgatagaagaggagtggttcctgcttcaggatttttgtttagttcacaacagatttggaaagttatacgagagaataaggatcttgacctacctgctcacaaggtaatggttgctacagttcgatgtgatgaaattgcacacgaaaagttttcctgcctaacctcagatgcagaatggatggaattggagagtgatgtgcagtcaggtccagtacctggttttggaaaaaaacttggctatattgtggacgtccacatgcaagagtatgacaaagaagccatctatttcgatgaagctgttaggacagcaaaacgacaactgctgaaatccagagtactgaatcttgtccaacccgcattccagaaaatgttggctcacctgcgtacgagggctcttgaaaaatataaaactgaacttaatcttactttggagagtggaaaaggttttgcagcagctgttcgagacactactgaatccaatctcaacgaatttgatcaagggtgtgcagatgctgtaatcgagcaggcagactgggactactctaaaatactagagaaggttcggcgcgatgttgaagaccacacactttcaattcgtgaaggcaagctatcagaattgacaaatcatgctaaggagaaactaagaaaagcactagttgaacctgtagagtctcttttcgatgctgcaggcccttcaacctgggcatcaataagaaacctttttaaacgagaaacggaggctatcctgccagagtttcagaaaaaccttgctgggtttgaaatggaaagtgcaacgtcagaaggaatggtatcaaaattaagggattatgccagaagtatcgtagaaaataaagctaaagaagaagctggcaaagttttgattcatatgaaggagaggtttacaacggttttcagtcatgacaaggattcaattccgagggtctggacagggaaggaagatgtccgtgcaatagcaaaggatgctcgatctgctgctctcaaacttctttctgtattggctgccattcgctgggatgagaaaccggataagatcgaaaaaatcctcacttccacactcctagatggttctgttacaccgaagtcgaagggtgcaagtgcttctagtgatccacttgcttcaactacttgggaagaagtttctccaaagtataccctcatcactccttctcaatgcaagtcactgtggaagcagttcaaagcagaaactgagttcgccattacacaagcggtttccacgcagcaagctcacaagcgcggcaatggtaggctgcctcctccttgggccatggtggcaattgcagttcttgggtttaatgagatcatgacgcttcttaggaatcccatatatctattcttgctatttgtgggttatttgctggtcaaagctttagcagtgcagctagatatcaacagagaattccaaaatggcgtggttcctgggatcatctctgttacagcaaaactaatccccacactacagaacattctaaacaaagttgcaacagagcaacaacaacagcaagggcatcaccaagatgctgctgcagaagctccacagcaacagcagcaaccacagccgcagccacctcctctactcctgagccccagaagcccaatgagcgaactgcggaggccgctgcacatgccattcagcccggtgcgcaaggcggtatcgccttcgccatcctcatcgtcttccaccgttacatcgcccaggaacgctggtgaagaccagaagcccaggcaaatggtacagcctgacaacgaatccaacaatgcttactctatagtttga</cdnaseq>

Protein Sequence

<aaseq>MDEAAAAEAVQLIDGEGEFAADSAERFMAAAGVAGCGLSYAVVS IMGPQSSGKSTLLNQLFGTNFREMDAFRGRSQTTKGIWIARCVGVEPCTVVMDLEGTD GRERGEDDTAFEKQSSLFALAISDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFS PRKTTLLFVIRDKTRTPLEHLEPVLREDIQKIWNSVAKPEAHKDTPISEFFNVQVTAL PSFEEKEEQFREQVQQLRQRFSNSIAPGGLAGDRRGVVPASGFLFSSQQIWKVIRENK DLDLPAHKVMVATVRCDEIAHEKFSCLTSDAEWMELESDVQSGPVPGFGKKLGYIVDV HMQEYDKEAIYFDEAVRTAKRQLLKSRVLNLVQPAFQKMLAHLRTRALEKYKTELNLT LESGKGFAAAVRDTTESNLNEFDQGCADAVIEQADWDYSKILEKVRRDVEDHTLSIRE GKLSELTNHAKEKLRKALVEPVESLFDAAGPSTWASIRNLFKRETEAILPEFQKNLAG FEMESATSEGMVSKLRDYARSIVENKAKEEAGKVLIHMKERFTTVFSHDKDSIPRVWT GKEDVRAIAKDARSAALKLLSVLAAIRWDEKPDKIEKILTSTLLDGSVTPKSKGASAS SDPLASTTWEEVSPKYTLITPSQCKSLWKQFKAETEFAITQAVSTQQAHKRGNGRLPP PWAMVAIAVLGFNEIMTLLRNPIYLFLLFVGYLLVKALAVQLDINREFQNGVVPGIIS VTAKLIPTLQNILNKVATEQQQQQGHHQDAAAEAPQQQQQPQPQPPPLLLSPRSPMSE LRRPLHMPFSPVRKAVSPSPSSSSSTVTSPRNAGEDQKPRQMVQPDNESNNAYSIV</aaseq>

Gene Sequence

<dnaseqindica>201..354#1292..1358#1597..1699#2216..2286#2420..2483#2568..2633#2762..2809#2893..2955#3041..3097#3216..3374#3748..3816#3892..3983#4360..4438#4704..4869#5261..5385#5518..5780#5860..5956#6052..6213#6301..6405#6547..6641#6729..6825#7629..7991#agggggagaggcctcgcgtcgcgtctcccacgtatcgtggtccgcgaaacccgagtggccggagaagccgaggcgaggcgaggcggttgccgtggcgggcgagtgacatcgtcgtcgtcgttgtcgtcgtcgtcgtcgtcgtcgcgcgccccacgaaccctatcggatcgggatcgggatcggagaggagaggagagggtatggacgaagcggcggcggcggaggcggtgcagctgatcgacggcgagggggagttcgcggccgactccgcggagcgcttcatggcggccgcgggcgtcgccggctgcggcctctcctacgccgtcgtctccatcatgggaccccagagcagcggtacgtacggacccatcccatccctcgcgccatgtcgagatcgcctcatcgatcggccgccgcgcgccatgcgtcatgattgggtatcgatcgatccctcgcacggcacctgttcgatcaaatgtttcggcgcgcgcgcagggccgctacgacgctcgtagtatacaaacatcagttttgaataatctttgctttaatttgtttggattggtagtacatcagtacaatacaaatctgcatttgctactagtggagtacttgcatacgtacgtttgtgtttctagcaagttattatggttgcattttttttttcgtctcccaatactgattgatggatgcatgaacgtactctttggctaaggtgtgtgtaaaggagccacttaattgtacacatctttcatcaagctctgcctctgctgacatgaatggatattataacccggcaaaatgaatggatattatagggtgtataagtctcgcataatctgttctccgcaatccacatagatgacagcatctaccgtttttcatttttcttacacgcctacctttcatgcatggaggaaagacccctttgtttttgtcttttctgatacttgactgtgttatactccttccgtttcataatgtaagactttctagcattgcccacatacatatagatgttaatgaatctagacacatacatatgtttagattcattaacatctaaatgaatgttggcaatgctagaaagtcttatattgtgaaacagatgaagtattactcttagcacgcattctttggctaatagtaccctgacactggcctttactacaatgtactattagcttttagctgacatgtgtgctttctgtcaccaatatttgtgagtacatgattaagaaattaattagtacttgtttgatcatcataacataccttttattttgagcaggaaagagtacgttgctgaaccaactctttggaactaattttagggagatggatgcgttcaggggaaggtagtcccgttttgttcctccacatgattataaatattcgtactgtcttatttttattttgttttttgaactagttacttttctttgctaggcagtagtacgtatctttgcttgttcattttcctgttctctgattgctgaactggatctctcacaggaactcatagtcacactattacattttgatttctggtagggaaataccatgatatcactgatattatgcctatgtctttaggagtcaaactaccaaaggtatctggatagcacgatgtgttggtgttgagccgtgtactgttgtgatggatttggagggtactgatggaagagaaagaggagaggtatgcttgcttaacgcgtatacaattcaattcccatgttcaatatatcttctagtgaaccttttggagtggccgtgtgcacttgtagaaagctgttctgtagaaatcggtaactagcccaagatatggtttcacagaacaataaccaaccactgacaattggatttttccctagcccgagatctttaaaagcaaagtttggatttttccctaccccgagatctttaaaagcaaaagttcagttagcattagtatctcctttcctcctgcaatgatttatctgagcaaattaagtttgcaatatttggtttataagtattgcgttttcattgcattgtcattttcttgtcttctgtttatatcttccaattaatgaaaatgagcttaacctgcttggctagctcctatgttttaaaatgtgcctttacatgtattacgagtttaagcaacttgagggatacatgagttgtttcttcagttccttttctgatacctgtgtcttctgccccattttaggacgacactgcatttgagaagcaaagttcgttgtttgctcttgcaatttcagacatagttctaattaacatgtgagttactcaattgttcaactctactactgagctcatattatgaaaattcctcatagccttctaggttgaactttaatatataattcatcaacttcatgactttgtattaccaccatatgtatgtcgataggtggtgccatgatattggccgggaacaagctgccaataagcctcttctaaaaacagtatttcaggtatttatctgttttttcagataacctttgccacagcaatacattcttgatgcatttgtaacatttggacaactgggtttgtaggtcatgatgcgtttgttcagtccccgaaagacaacactattatttgttatacgtgataaaaccagggtttgcctctttgttctttattctttcttgaatatatttactgttatgttttgtgcaagctgtttggaaatataatcattgctccatttacttgggccaatctcagacacatcgttgttttcatgtagactccacttgagcatctagaaccagttctgagggaggatattcaaaaggtgatgccatcatctattgtttccatctttgttacaacatagtttcctttctctagtcctaatattgtcacagatttaatcagatatggaactctgttgctaagccagaggcgcacaaagacacccctatcagtgaatttttcaatgtaggttttgtagttccagtattcaatctttgaaacaaagatgaaggttttactgtttatgttaacatggtttgtcaatatgaaggtgcaagtcactgcattgcccagttttgaagaaaaagaagaacaattcagagagcaggtaccttttcacttgtactctaatgaaacagttgtctggggacaacagaacgttttcaaacaaaaatagggaactgaaaattattatttttcaagcaccttacttttacctctgccaggttcaacaacttaggcagagattttcaaattcaattgcaccaggaggtcttgcaggtgatagaagaggagtggttcctgcttcaggatttttgtttagttcacaacagatttggaaagttatacgagagaataaggatcttgacctacctgctcacaaggtacacttatatctccttctgtgcactaaagacttatactgggtcagtattattacacttaccattaaggatttaaaatctataatattgtctgtgcactttagaatacaattgaatatactatgcagaatacaccaatgaatccccactttctgaacgaaaagactaatgccacaccatctgatgtatgctaaaattgtttctttcaaatgcattgtggaaacttttgttgtcaacagtgatcagtaaaatagttaactgcgagtttaaatctgtatgatatacctaggtgaagtaacatcatcaattcagtaagagaaaccactctagcttgtcggttattgatttattttcatttgtttcattatacaaggtaatggttgctacagttcgatgtgatgaaattgcacacgaaaagttttcctgcctaacctcagatgcagtaagaatctcccacttgatctattgacctgtgtacaatttccaggttcattaatttgtttgtgtcattctttaggaatggatggaattggagagtgatgtgcagtcaggtccagtacctggttttggaaaaaaacttggctatattgtggacgtccacatgcaagagtaagcccctgcataatataagttgttgacagctcacagttgtggtttgttcagtgtgattcctattaccttcaatttagcaagcaaacagtataagtaatataaacttggtaacataaatgcatttgatgtttctataaatctaccagtagataggcatatgcatcgcaaacaggaaatgtcttaaaagttctcaaacacttaattatgatatttacggaagaattaatatagagatgttttcctctgtttcgaattgctatttgcaaattctggaagctagaaattggtcaccttgttttgtaccaaatccaatattttgtggtgacggtaagtatttgttcatgaataaaattgatacgtgaattatttttaggtatgacaaagaagccatctatttcgatgaagctgttaggacagcaaaacgacaactgctgaaatccagagtactgaatgtaaggactcttgtacatcaatactgttttttcttatattattttaatatataaaggaagctttgattgacctcagccaattacatcaatactgtattgttatcgttgaaaatggtatgctctctaagaactaaaacttttttgtaaccactctgctactctgataagttaatctggcgctaaagagaaatgccaagattttctttcttctgaataaacacagttcatatatatgttttaattttttgtctcaaattcttcgcagcttgtccaacccgcattccagaaaatgttggctcacctgcgtacgagggctcttgaaaaatataaaactgaacttaatcttactttggagagtggaaaaggttttgcagcagctgttcgagacactactgaatccaatctcaacgaatttgatcaagggtgtgcaggtaaacttcttaaactcttgataatttatatagatacttcatggccaatgaccacaaaatttatttgagtagtactgttattagatgtaataatcgttacattcttgaattgaagcagtctactagtctgagtcctgcaacctgcaagtagctgaatttggtgcacttaaacttcaaagaacattaaatttgtctaaagacggtatacctctgtgcagtgatgttgcatgctttttcatcattatatctacttactgtgcatgattaacatgcaatttgcagggtactcttttccagattatttttgtgtaacaattcttaatgtggtactggtgaccttgaggaaagtgatactgccatctgacttgtttttctgttgattctgttgtagatgctgtaatcgagcaggcagactgggactactctaaaatactagagaaggttcggcgcgatgttgaagaccacacactttcaattcgtgaaggcaagctatcagaattgacaaatcatgctaaggttaagtatggcaagctaaagaaagccctttcttttagcaactcataactaacctctcttctgcatcgatttagcatgtgctacgggatttggttaccacatggtactaatgcaggtatattatacatgcaggagaaactaagaaaagcactagttgaacctgtagagtctcttttcgatgctgcaggcccttcaacctgggcatcaataagaaacctttttaaacgagaaacggaggctatcctgccagagtttcagaaaaaccttgctgggtttgaaatggaaagtgcaacgtcagaaggaatggtatcaaaattaagggattatgccagaagtatcgtagaaaataaagctaaagaagaagctggcaaagttttgattcatatgaaggagaggttggcaaaatcatctattattcgttcaccataccgatcaatttctcgcacttctgacaaagttgcttgccattgccaggtttacaacggttttcagtcatgacaaggattcaattccgagggtctggacagggaaggaagatgtccgtgcaatagcaaaggatgctcgatctgctgtataggacttgaacccttctaagttctaatgggatgacatagttcttcctttgattccccttctttgttaaatggacttgcactcgtgttgcaggctctcaaacttctttctgtattggctgccattcgctgggatgagaaaccggataagatcgaaaaaatcctcacttccacactcctagatggttctgttacaccgaagtcgaagggtgcaagtgcttctagtgatccacttgcttcaactacttgggaagaagtaagcttgtgttaatttttcgcgctgctgtaaatattagaagtgcataaatcatggaaccatcacgattattgaactcttgagcaggtttctccaaagtataccctcatcactccttctcaatgcaagtcactgtggaagcagttcaaagcagaaactgagttcgccattacacaagcggtttccacgcaggtgtgtatccataatttgggaggatctttatgctttcttccaaaatttggatcacgtacatggtttgatcttttcctatttgatcaaagagtcttattttcatttgtcagttccttgaattttcatctttttttactccagcaagctcacaagcgcggcaatggtaggctgcctcctccttgggccatggtggcaattgcagttcttgggtttaatgagatcatgacgcttcttaggtatttgcttgtactatacatatcaattctatacccactcacaaaacaatataacattatatcttcgtttcttcttgttttgcacaggaatcccatatatctattcttgctatttgtgggttatttgctggtcaaagctttagcagtgcagctagatatcaacagagaattccaaaatggcgtggtaaggttttgaacattcaccgtgaagctaacctatagtattgatatgctattgcaatagtatcctatagagatcaacaaatttcccggtactatctgattatgtgttgcatcatagattcatagtggagcatgtacaaggtcattatctattgaacactttttacgaaatttgtttcctatgaggctatgaatcgggaaggataaattgtttattgaacactagtatcctattgctagtgtataaattgtttcctatgctacttatttcatgaatatttagtgcaacctcaacttagaggatcttgtgaaaaatatatagtggcatagtttattctacagagaaagttttcttttgttaacatagcaatctgcttataaaaccttaattttgctctaattttgatgaaacatcaggctataagcgctacacattggtgcagggattgaaattttggttcgaaatttccgaaatttcggtaaattcggaccccccggcatgccaatatctcggccgaatttttcagtttttctcaaacttttgtgaatttaatcaaattcagttaaattgtgtcgaaatttcagaaaattttggcccaaaaatttttgttctaccgaaatggccgatattttagccgaaatcgaaattgaaaaccctacattggtgtgtatcagcaattcagtattgtcttctgagttagaatgttatgccagtgcctcactagtgttaataagtttgcaaaaaaccacattgatccttttctccactaacacaacaattatgctgaatcttatatattgcaggttcctgggatcatctctgttacagcaaaactaatccccacactacagaacattctaaacaaagttgcaacagagcaacaacaacagcaagggcatcaccaagatgctgctgcagaagctccacagcaacagcagcaaccacagccgcagccacctcctctactcctgagccccagaagcccaatgagcgaactgcggaggccgctgcacatgccattcagcccggtgcgcaaggcggtatcgccttcgccatcctcatcgtcttccaccgttacatcgcccaggaacgctggtgaagaccagaagcccaggcaaatggtacagcctgacaacgaatccaacaatgcttactctatagtttgatgatcttgggtgttcagggtcagctggtggtttatactgtccaactggaaattggaaggtatgagcatttcgttgtcctcatttgaatgcataggtacactgattgcagcaatgatccatcgtcagtagggtatcaagacagaataattcaaaatattttgtctcgcaaaattttgtaaggagggtggttaatctgtagaatggacagaacaattgctactgaacaccatttatcagcatgtatataggaaagattcaactgcaatgcctaggatatggtcaatcaaaaagaaaaaaaatatatatatacttctaatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0604600, RefSeq:Os12g0604600