BGIOSGA009179

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Revision as of 03:27, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009179| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009179, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009179

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009179, complete gene.

LocusTag

OSJNBA0054K20.38

Ensembl Transcript ID

BGIOSGA009179-TA

Ensembl Protein ID

BGIOSGA009179-PA

Length

2887

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35655166..35658052

Sequence Coding Region

35655166..35656486,35657427..35657764,35657882..35658052

Genome Context

<gbrowseImage1> name=IndicaChromosome02:35655166..35658052 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:35655166..35658052 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTATCAGAGCAGTCAATTCGTGGGGTTTCTGGTGTGGAGATGAAGTGGGAGAGCACTGGTGGTCAGAGGAACTGCCAACAACTTGGTGGTGGTGTCTTTGGAGGAGATGCCCACCACCTGTTCGATGAAATGTCGACCTGTCCAAGAGGCGACTCAGCTGCTGTCCTTCGTGTCACCGTGAGCCAGATCATATATCCAGTGACATATGAGGTGTTGCATCAAGTGTACGATACCTATGGAGCAGTGGCGGTGCAGGTTCTTGCAGTGAGCACATGGCAAGTCAAGGCTCTTGTGTCATTTATGTCCAGCCATGACGCGGAGAGGGCTCGGTCCGCCACCCACGGTCGCGACATCTACGACGGGGGCTGCTTACTGGATGTGCAGCACGTCCAGATGTTCCCTGGAGATGGCGCCACCGCCACGCACACCACCTGTTTGACAATGGTACCAAGTAGCGCCACCGCCAGGCCAGCGGCCAAGAGTACTGCTGCTACACCAGAACGCGTGTTCCCTGCTACAACAGCTTCATATGTACCCTCAATTACATCAGCAGCCATGGTGACATCGGTTCCTTTCAGCGAGACCAAGAAGGCTGAGACTGACATGGACAAGGTGGTGGAGAACTTAGACAAGACCATTCAAGACCTGTGCACCAAGATCGATCGGATGCTGGAGGCATTTCGCCACACCAAGGTGGATTTATCCTTGAGCAAGGATTCCACTAGAGATGTGGCAGCGTTGAGCGCCAACACTGATCCAACTTCCATCGCATTGGAGGTCAGTACAGAGGCCGGCTCAACTAACCATGTTGACACAGCCAAGCTTGGCATGAGAACAACCATCGAGTGTTCAATGAAGTGTGAGAACCAGTTGGCTGATGATGATGGTGGCAAAGACATGGCCAAGGAGGAGTGGATGGAGCTCATGGAAGTGGATACCAAGTTCACCACTATGTATTTATGCTTCAGAGATCCATTGTTAATCATCAATGCAATTCCTCCCAGGAACTGGAGTTGGTGCTTGAGCCGTGACTACTTTGGAGTTGTCGGCCTCTCTTTCGTTTCATTGAAATTGGAAGTACTCTATGGTTGCTTTGACCGGAGCTCAGAATACACAGCTAGCCCTCCACTAGTACCACCTTGGAGAGCAGCAATTCCATGGAACAAAGCTGAGATGACCTCAGGTTCTCGGCCGTTACCATGGCCTGATCCACAGCTTTGTCAAGGCAGCGGAGGCGTGGTGGTAAAGCTCTTACAACCTTGGCCGCCACTTATTCAAACAAGTGTTCGAGCTGAAATTGAAACACTGAATTTATATGGTAAAACCATACAATTTTTAGCAATTTGGGAGTTTGCAAACAAAGAAGTAGCTCTCATTCAGACAAAGAAGCATATGCATGTTTCTCAGCCCACTGATCTCAATATTTGTATGTTACATCTGGGCTCTCATGGAGTATATGCTGATAGTAGTGGTGAAGAAGGCGTGAAGGCTTGGTGGTTGAGGCAGCAAAAGCATGGTAGAGAGTGTGGTTGTAATGCTCAGGTTTTATGTATGTTGGATAAGTGGATTCAACAGTGGGCAGGGTCTACATCAGATGGTTCGAAGGTCATCAAACAATTGTTCTGGGATTCTGCCCAACAAGACATTTCCCTGCAGGAGGCTAGACAAGTGGGCTGGCTTTGGGCCCATTCGGCTAGGGAGAAGGAGACTAGAAAAGAGGCAAAGCAGCCAGCAGCCAGGGTCATCGATGAATCAATTACCAGAACGCCTCAGACGATAGCTTCTTCCTCCTTGCTGCTGCTTCCCCTCTCAATTCCTACTCTCTAG</cdnaseq>

Protein Sequence

<aaseq>MVSEQSIRGVSGVEMKWESTGGQRNCQQLGGGVFGGDAHHLFDEMSTCPRGDSAAVLRVTVSQIIYPVTYEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATHGRDIYDGGCLLDVQHVQMFPGDGATATHTTCLTMVPSSATARPAAKSTAATPERVFPATTASYVPSITSAAMVTSVPFSETKKAETDMDKVVENLDKTIQDLCTKIDRMLEAFRHTKVDLSLSKDSTRDVAALSANTDPTSIALEVSTEAGSTNHVDTAKLGMRTTIECSMKCENQLADDDGGKDMAKEEWMELMEVDTKFTTMYLCFRDPLLIINAIPPRNWSWCLSRDYFGVVGLSFVSLKLEVLYGCFDRSSEYTASPPLVPPWRAAIPWNKAEMTSGSRPLPWPDPQLCQGSGGVVVKLLQPWPPLIQTSVRAEIETLNLYGKTIQFLAIWEFANKEVALIQTKKHMHVSQPTDLNICMLHLGSHGVYADSSGEEGVKAWWLRQQKHGRECGCNAQVLCMLDKWIQQWAGSTSDGSKVIKQLFWDSAQQDISLQEARQVGWLWAHSAREKETRKEAKQPAARVIDESITRTPQTIASSSLLLLPLSIPTL</aaseq>

Gene Sequence

<dnaseqindica>1..1321#2262..2599#2717..2887#ATGGTATCAGAGCAGTCAATTCGTGGGGTTTCTGGTGTGGAGATGAAGTGGGAGAGCACTGGTGGTCAGAGGAACTGCCAACAACTTGGTGGTGGTGTCTTTGGAGGAGATGCCCACCACCTGTTCGATGAAATGTCGACCTGTCCAAGAGGCGACTCAGCTGCTGTCCTTCGTGTCACCGTGAGCCAGATCATATATCCAGTGACATATGAGGTGTTGCATCAAGTGTACGATACCTATGGAGCAGTGGCGGTGCAGGTTCTTGCAGTGAGCACATGGCAAGTCAAGGCTCTTGTGTCATTTATGTCCAGCCATGACGCGGAGAGGGCTCGGTCCGCCACCCACGGTCGCGACATCTACGACGGGGGCTGCTTACTGGATGTGCAGCACGTCCAGATGTTCCCTGGAGATGGCGCCACCGCCACGCACACCACCTGTTTGACAATGGTACCAAGTAGCGCCACCGCCAGGCCAGCGGCCAAGAGTACTGCTGCTACACCAGAACGCGTGTTCCCTGCTACAACAGCTTCATATGTACCCTCAATTACATCAGCAGCCATGGTGACATCGGTTCCTTTCAGCGAGACCAAGAAGGCTGAGACTGACATGGACAAGGTGGTGGAGAACTTAGACAAGACCATTCAAGACCTGTGCACCAAGATCGATCGGATGCTGGAGGCATTTCGCCACACCAAGGTGGATTTATCCTTGAGCAAGGATTCCACTAGAGATGTGGCAGCGTTGAGCGCCAACACTGATCCAACTTCCATCGCATTGGAGGTCAGTACAGAGGCCGGCTCAACTAACCATGTTGACACAGCCAAGCTTGGCATGAGAACAACCATCGAGTGTTCAATGAAGTGTGAGAACCAGTTGGCTGATGATGATGGTGGCAAAGACATGGCCAAGGAGGAGTGGATGGAGCTCATGGAAGTGGATACCAAGTTCACCACTATGTATTTATGCTTCAGAGATCCATTGTTAATCATCAATGCAATTCCTCCCAGGAACTGGAGTTGGTGCTTGAGCCGTGACTACTTTGGAGTTGTCGGCCTCTCTTTCGTTTCATTGAAATTGGAAGTACTCTATGGTTGCTTTGACCGGAGCTCAGAATACACAGCTAGCCCTCCACTAGTACCACCTTGGAGAGCAGCAATTCCATGGAACAAAGCTGAGATGACCTCAGGTTCTCGGCCGTTACCATGGCCTGATCCACAGCTTTGTCAAGGCAGCGGAGGCGTGGTGGTAAAGCTCTTACAACCTTGGCCGCCACTTATTCAAACAAGTGTTCGAGCTGAAATTGAAACACTGAATTTATATGGTGAGTCTCATCAAGTCTCCTTGAACTACAGCGTTGCCCAATTCATGAGTAGAACAATTAATTCCACTAAGGGCTTGCTGCAAAATCTGATTGTTGGATGGTGTATTTGGTATGAGATATGTCTCTCTGGTGCCTTTAGGAAGGCCTATCAGCACACACATCATTCAACCTATGGTTGGGCATATGGGGATCATGAATTGTTCTTGCTGCTGATGTTGATTTCCTATCTATCACCCGATGCATGGTGTGATTGTTTGTTCAGTGGAGCTAATGTTGATGGTAATTGCACTTGCAAGTCACATGAGAGACGTACCCATCGCCATGCTCGGTTCTATACTATTCCAATTTATTTCAGGTTCAGAGTAACAACAATGATGTACTAGATGATACTTCTTGGACTCAATTCGGATCAAACAATGGTGAGGCATTTAGGGTTTCAACAAGAAAGTTGGTCAACTTGCAACCTTGGCCTCCTCCTTCACAATGGAGGAGTGAGGTATTCAGTTTGTGTGCAGCAGGAGGGCAAGGGCTCAATTTTTCTTGGAAGTGTATATCTGAAGGGAAACTAATGTTATGGACAAATGTGAAAGTTATTAGAAGAGAATATACAAACAAGGTGTTATGGCTGTCAGTTGCCAATTCTTGGGATTTAATATGGGCAGTGCTACAACAGTTGCTATGTACATCTGAGCTTATTCTTCAATGGAATAATCAACATGGGCAGACACATGAGCTATTGTTACAAAGGGAGCAGCTGAAACTTGGTGCAGTCCATCTCAGTTTGGAAGCTAGCACTTTCAGTAAGAATTCTCGTGGAATAGAACTGGTTAAATGTTCAGAGAGATGCCTCATTTGTTTAGTTTGTGAGGACAGATAGTCTTGCACACATGGGCCTATCGAGTGGTTAAATTAGTTGATGCAAGATTGGTTGGTGATCAAGGTAAAACCATACAATTTTTAGCAATTTGGGAGTTTGCAAACAAAGAAGTAGCTCTCATTCAGACAAAGAAGCATATGCATGTTTCTCAGCCCACTGATCTCAATATTTGTATGTTACATCTGGGCTCTCATGGAGTATATGCTGATAGTAGTGGTGAAGAAGGCGTGAAGGCTTGGTGGTTGAGGCAGCAAAAGCATGGTAGAGAGTGTGGTTGTAATGCTCAGGTTTTATGTATGTTGGATAAGTGGATTCAACAGTGGGCAGGGTCTACATCAGATGGTTCGAAGGTCATCAAACAATTGTTCTGGGATTCTGCCCAACAAGACATTTCCCTGCAGGTACCTTGGGATCTTGGGGGCATTAATCTGGCGAGTCAGTTGCATCGGCTTGGGGACAAGCCGATTCTTAACGGGGGAAGAATGTCATGTACATGGCCTACTGTGATGTCCTTCCAGGAGGCTAGACAAGTGGGCTGGCTTTGGGCCCATTCGGCTAGGGAGAAGGAGACTAGAAAAGAGGCAAAGCAGCCAGCAGCCAGGGTCATCGATGAATCAATTACCAGAACGCCTCAGACGATAGCTTCTTCCTCCTTGCTGCTGCTTCCCCTCTCAATTCCTACTCTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009179