BGIOSGA009191

From RiceWiki
Revision as of 03:27, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009191| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009191, complete gene.| tag = OsI_092...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009191

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009191, complete gene.

LocusTag

OsI_09253

Ensembl Transcript ID

BGIOSGA009191-TA

Ensembl Protein ID

BGIOSGA009191-PA

Length

5617

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35801553..35807169

Sequence Coding Region

35801553..35801988,35802107..35802678,35803275..35803871,35804428..35804789,35804950..35805250
,35805716..35805838,35806102..35806557,35806669..35807169

Genome Context

<gbrowseImage1> name=IndicaChromosome02:35801553..35807169 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:35801553..35807169 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACCTCCTCATCGCGCAGATCAACACCGACCTCCGCTCGTCGGACGCGCTGCGGCAGTCGTCCGCGCTCCTGCAGGCGCTGCAGCAGTGCGCCGCCGGCCGCGACGTCTCCGCGCTCGCCCGCACCGTCGCCACCGAGATCCTGTCGGCGCCCTCCTCCGCCGTGTGCAAGCGCCTCGCGCTCGACCTCCTGCGCGCGCTGCCGCTGCCCCCCGACCTCCTCGACCCGCTCCTCCTCTCCTCCCTCCGCTCCGACCTCTCCTTCCCCGACCCCGACGTCGCCGCCTCCTCCATGGCCTCGTTCCCCTCGCTCCCTTCCCACCTTCTCCCCTCCCTCCTCTCCTCCGCCCACGCCGACATCGCCGCCGCTCTCTCGTCGTCCGCCGAGTCACTCCGTCTCGCCGCCGTCACCTCGTTATCCTCTCTCCTCCCGCCGTTTGAGGCGCTTGCTCGGCTCTTCCAGGAGCTGGATGCCCGGCGGATGAGCCGGCTTGCCGGGGACAAGCTTGTTGATGGAGAGGGCGCGCTTGCCGTGCGTGCTCAGTGGGCAGCTGAAGCCATCAATTTCATTTGGTCCCGGCGAAACATGCTCATTGCACGCTCCATGGTTATGCCAGTAGAGCGCTTCCGGGTCACCGTGTACCCTCTTGTGCACGCAGCGAAAATGGTTGCTTCTGGCATGGTGAACACATTGCGGCAGATTGCCAAGCCAGGGGACACTACAATAGATGACAGTGTGGAGTCGAGCGCGGAGAAGCTGGTTGGGGTGTCGGATATCATCTCGCACTTGCTGCCTTTCCTCAGCTCACTGGATCCACCATTGGTTTTCGAGGTGGGGATAAATATGTTGGCACTTGCAGATGTGCCTGGAGGCAAGCCGGAGTGGGCTTCAGCTGCCACTACTGCAATTTTGACACTTTGGGACCGGCAAGAGTTCTCATCGATGAGGGAAACCATTGTCAGAGCCGTCGTGACTAATCTCCATTTACTCGATCTTGGAATGCAGGTGTCTCTGTTCAAAAGGCTGCTTCAAATGGTGAGGAATTTGAGAGCAGAATCAGATCGTATGCATGCATTGGCATGTATTTGTCGGACTGCTCTTTGTGTTGATCTTTTTGCAAAAGAGAGTGTTAGAAGAGGTCAGAAGCCTGTTCCAGGAACAGATGTGATCTCACTATTTGAGGATGCAAATGTGAAGGGTGATCTAAACAGCATAACGAGCAAGAGCTTGTTCAGAGAGGAGCTAGTCGCTTCCCTAGTCGAAAGTTGTTTCCAGCTATCACTCCCCCTACCTGAGCAGAAGAATTCTGGCACAGAGAGCAGAGTTATAGGAGCATTAGCTTATGGAACTGGATATGGTGCATTGAATTGGACAGAACCTGCTTTGGATGTGGTGGAAGTTTGCAGGCCTTGTGTTCTTTGGGACTGTGGTGGGCGTACCTATGCAATTGATTGCTATCTGAAGTTGCTTGTACGGCTTTGCCATATATATGATACTAGAGGTGGTGTAAAGACAATCAAAGCTGGTGCATCTCAAGATCAGATTCTAAATGAGACAAGGCTTAAAAATTTGCAGCTACAGCTTATCAAGGATCTTCGTGAGGTTCATACACCAAGAATTTCAGGACGATTGATATGGGCAATTTCTGAACATTTTGATCTTGAAGGTCTGGATCCTCTTTTAGCTGATGACCCAGAGGATCCATTGAATATCATCATATCTAACATGCATAAGATTCTATTCAAGATCGATTCATCTACAACTACCTCAAGTAGGATACAAGATGTGCAGTCTGTCCTCATATGCGCTCAACGTTTGGGATCGAGAAATGCAAGAGCAGGCCAGCTCCTCACTAAAGAATTGGAGGAGTTCAGGGCAAGTACTTCAGCTGATTCTGTCACCAAGCATCAGTCGCGTTATGTCTTGCAAATAATAAAATATCTAACGAACCATCCTGATAACAGGTGGGTTGGTGTAGGTGATGCTACAGGGGATTATCCATTTAGCCACCACAAACTTACTGTTCAGTTTTCAGAGGCATCTGCAGCACAAGATAGGAAATTGGAAGGATTAGTTCACAAGGCCATCGAAGAGCTTTGGAGGCCAAATCCCACTCAGTTGACTCTCCTACAAATGAAGGGGATTGGTGCTTTGCACAAAGAGCTTCCAAAAACACTTACTTTGACTGGCAGCAGTGATCCATGCTATATTGAGGCATATCATCTGGCAGATCCAACTGATGGGAGAATCACCTTACATCTAAAGATTTTAAATTTGACTGAGCTGGAACTCCACAGGGTTGATATCAGAGTTGGTCTCTCTGGAGCACTGTATTATATGGATGGATTCTCCCGCACAGTTCGGCACCTACGTAATCTTGTTTCCCAGGATCCAGTCCAAAGTAGTGTAACTGTTGGAGTTTCGCACTTTGAGAGATGCTCCCTCTGGGTTCAAGTCTTGTATTACCCATTTTATGGAAGTGGAGGGTCTGCAGACTATGAAGGAGATTATGCAGAGGAGGACTCACAAACAGTTAGGCAGAAACGCTCACTTAGGCCGGAGCTTGGTGAGCCAGTTGTTTTGCGGTGCCAGCCCTACAAGATCCCCCTTGCTGAACTTCTCTTGCCATATGAGTGCTCCCCAGTTGAGTATTTCCGGCTATGGCCAAGCTTGCCAGCCATGGTGGAGTGCACTGGCACATACACATATGAAGGTAGTGGTTTCAAGGCCACTGCTGCTCAGCAGTACGACAGCTCTCCTTTCCTCAGTGGGTTGAAGTCGATTTCTTCTAAGCCCTTCCATCAAGTCTGCTCTCATTTCATCCGAACAGTAGCCGGGTTCCAGTTATGTTATGCCGCGAAGACATGGTTTGGTGGGTTTGTGGGCATGATGATCTTTGGCGCAAGCGAGGTCAGCCGGAATGTTGATCTTGGCGATGACACGGCCACAATGATCTGCAAATTCGTCGTGCGTGCCTCCGATGAATCCATCACAAGAGAGATCCAATCAGACCTCCAGGGCTGGCTGGATGACATCACCGACGGCGCCGTGGAATACATGCCGGAGGAAGAGGTGAAGAGCGCGGCGGCTGAGCGGCTGAAGGTTTCCATGGAGAGAATAGCCCTGCTCAAGGCGGCCAAGCCGAAGGTGCCACCGGCGAAAACCAAGGAAGAAGAGGAAGAGGAGAAGAAGGAGCAAGAGGACCTGGACGAGTTTGGGAACCCCAAGGGCCCCTCGACGCTTTCCAAGCTGACGGCGGAGGAGGCCGAGCACCGTGCGCTCCAGGCCGCCGTGCTGCAGGAGTGGCACCAGCTGTGCAAGGAGAAAGCCTTGAAAGCACAGTGA</cdnaseq>

Protein Sequence

<aaseq>MDLLIAQINTDLRSSDALRQSSALLQALQQCAAGRDVSALARTVATEILSAPSSAVCKRLALDLLRALPLPPDLLDPLLLSSLRSDLSFPDPDVAASSMASFPSLPSHLLPSLLSSAHADIAAALSSSAESLRLAAVTSLSSLLPPFEALARLFQELDARRMSRLAGDKLVDGEGALAVRAQWAAEAINFIWSRRNMLIARSMVMPVERFRVTVYPLVHAAKMVASGMVNTLRQIAKPGDTTIDDSVESSAEKLVGVSDIISHLLPFLSSLDPPLVFEVGINMLALADVPGGKPEWASAATTAILTLWDRQEFSSMRETIVRAVVTNLHLLDLGMQVSLFKRLLQMVRNLRAESDRMHALACICRTALCVDLFAKESVRRGQKPVPGTDVISLFEDANVKGDLNSITSKSLFREELVASLVESCFQLSLPLPEQKNSGTESRVIGALAYGTGYGALNWTEPALDVVEVCRPCVLWDCGGRTYAIDCYLKLLVRLCHIYDTRGGVKTIKAGASQDQILNETRLKNLQLQLIKDLREVHTPRISGRLIWAISEHFDLEGLDPLLADDPEDPLNIIISNMHKILFKIDSSTTTSSRIQDVQSVLICAQRLGSRNARAGQLLTKELEEFRASTSADSVTKHQSRYVLQIIKYLTNHPDNRWVGVGDATGDYPFSHHKLTVQFSEASAAQDRKLEGLVHKAIEELWRPNPTQLTLLQMKGIGALHKELPKTLTLTGSSDPCYIEAYHLADPTDGRITLHLKILNLTELELHRVDIRVGLSGALYYMDGFSRTVRHLRNLVSQDPVQSSVTVGVSHFERCSLWVQVLYYPFYGSGGSADYEGDYAEEDSQTVRQKRSLRPELGEPVVLRCQPYKIPLAELLLPYECSPVEYFRLWPSLPAMVECTGTYTYEGSGFKATAAQQYDSSPFLSGLKSISSKPFHQVCSHFIRTVAGFQLCYAAKTWFGGFVGMMIFGASEVSRNVDLGDDTATMICKFVVRASDESITREIQSDLQGWLDDITDGAVEYMPEEEVKSAAAERLKVSMERIALLKAAKPKVPPAKTKEEEEEEKKEQEDLDEFGNPKGPSTLSKLTAEEAEHRALQAAVLQEWHQLCKEKALKAQ</aaseq>

Gene Sequence

<dnaseqindica>1..436#555..1126#1723..2319#2876..3237#3398..3698#4164..4286#4550..5005#5117..5617#ATGGACCTCCTCATCGCGCAGATCAACACCGACCTCCGCTCGTCGGACGCGCTGCGGCAGTCGTCCGCGCTCCTGCAGGCGCTGCAGCAGTGCGCCGCCGGCCGCGACGTCTCCGCGCTCGCCCGCACCGTCGCCACCGAGATCCTGTCGGCGCCCTCCTCCGCCGTGTGCAAGCGCCTCGCGCTCGACCTCCTGCGCGCGCTGCCGCTGCCCCCCGACCTCCTCGACCCGCTCCTCCTCTCCTCCCTCCGCTCCGACCTCTCCTTCCCCGACCCCGACGTCGCCGCCTCCTCCATGGCCTCGTTCCCCTCGCTCCCTTCCCACCTTCTCCCCTCCCTCCTCTCCTCCGCCCACGCCGACATCGCCGCCGCTCTCTCGTCGTCCGCCGAGTCACTCCGTCTCGCCGCCGTCACCTCGTTATCCTCTCTCCTCCCGCGTGATGACCTCGCGCTCATGTGCTCCACTAATCCCTCGCTCATGGGGCACGCTACCACTTGGTGGGGGCCGGCTGGCGGAGCTTGCATTGGACCCTGCGGATGCTGTGGCTGCCACAGCGTTTGAGGCGCTTGCTCGGCTCTTCCAGGAGCTGGATGCCCGGCGGATGAGCCGGCTTGCCGGGGACAAGCTTGTTGATGGAGAGGGCGCGCTTGCCGTGCGTGCTCAGTGGGCAGCTGAAGCCATCAATTTCATTTGGTCCCGGCGAAACATGCTCATTGCACGCTCCATGGTTATGCCAGTAGAGCGCTTCCGGGTCACCGTGTACCCTCTTGTGCACGCAGCGAAAATGGTTGCTTCTGGCATGGTGAACACATTGCGGCAGATTGCCAAGCCAGGGGACACTACAATAGATGACAGTGTGGAGTCGAGCGCGGAGAAGCTGGTTGGGGTGTCGGATATCATCTCGCACTTGCTGCCTTTCCTCAGCTCACTGGATCCACCATTGGTTTTCGAGGTGGGGATAAATATGTTGGCACTTGCAGATGTGCCTGGAGGCAAGCCGGAGTGGGCTTCAGCTGCCACTACTGCAATTTTGACACTTTGGGACCGGCAAGAGTTCTCATCGATGAGGGAAACCATTGTCAGAGCCGTCGTGACTAATCTCCATTTACTCGATCTTGGAATGCAGGTCTGAATCAATCTCCTCATAGCAACTTACTTTAGCCTAGTCAATCTGATGATTACTTTTAGTTATTTCTATAATATACTAAGTAAAAATTTAGATCAACCTTCAATACCAACTGTATGACTATAAGGATCATGGAAGTGGGTATATGGGTTCTTAGTGTTCACTGGCAGCTGTAGAGGGCAATTTTCGGTCAATTTGAATATTTACAATCATCAACTGTAGATGATCTTGTTCAAATATAGCTTCCTTTCAATCATTCAATGACATCAAGGTTTCGTTTGAATTTATGTCTTTAAACTCATTCCAATATAACATGTAATTTTAACCAGCTAGTGTTTATTATGAGTGCACCATGAAACCAAACAGGTTTGGGATGCTATCCACACCATCTAAACTATTTCATTAGAGTTGCCAGCAGTGAACCAAATGGCACCTTAGTTGGTTCGGAATTCCATCTCCTGATTGCTGCCATTCAACTCAACAATTATTTGATTTCTCACGATATTAGTTGCCACTATATTCCCTAGCATTAACCGGCGATCTGTGTTACATGCATATAATAACATGGATTTACAAAAGTATGTTTTGTGATGCAGGTGTCTCTGTTCAAAAGGCTGCTTCAAATGGTGAGGAATTTGAGAGCAGAATCAGATCGTATGCATGCATTGGCATGTATTTGTCGGACTGCTCTTTGTGTTGATCTTTTTGCAAAAGAGAGTGTTAGAAGAGGTCAGAAGCCTGTTCCAGGAACAGATGTGATCTCACTATTTGAGGATGCAAATGTGAAGGGTGATCTAAACAGCATAACGAGCAAGAGCTTGTTCAGAGAGGAGCTAGTCGCTTCCCTAGTCGAAAGTTGTTTCCAGCTATCACTCCCCCTACCTGAGCAGAAGAATTCTGGCACAGAGAGCAGAGTTATAGGAGCATTAGCTTATGGAACTGGATATGGTGCATTGAATTGGACAGAACCTGCTTTGGATGTGGTGGAAGTTTGCAGGCCTTGTGTTCTTTGGGACTGTGGTGGGCGTACCTATGCAATTGATTGCTATCTGAAGTTGCTTGTACGGCTTTGCCATATATATGATACTAGAGGTGGTGTAAAGACAATCAAAGCTGGTGCATCTCAAGATCAGATTCTAAATGAGACAAGGCTTAAAAATTTGCAGCTACAGCTTATCAAGGATCTTCGTGAGGTTATGCTCTTAGTTAATCTTAACTTTTAAAATCTAAACACGATGGCATGTTTGTTTTACATGAACCCACATAGTTCTTTATATTTGTTGAATGTTGATGCTTCGTTCATCCACCAAATAAATAAAACAGTGGTTTATCTATTTTATACTATCTTTATGGCAACCCATTAGTTTTTCTCTGTTGCACTGAACTCCTATATAATATTACAGTACATGATTTTGTTTCTTGGCATGCATCATTGTTATGCTTGTCCTTGTCTTTTCCGGCCTCATGGATCTGACTATTGCAAAAACTTGTGCTCTAAAGTACATTTCCCATAAACTTCTCTCGTTCAATAACTAAAAAGCATACACTTTGTCAAGGCTTTACTTTAGTTTAGATTATATTATGGCTGTCTTTGCTGGGCTTTCCTTTTGCTCTTCTTCCCCTTTTCTTTTTTCAAATATTTATAAACTAGAACTGCATCATCTGTAAAAGATTCTTTTCCTAGTTGGTAATAATCATAAAGTGCCGATGTTGACATGACTTCTACTCTATATTCTACTTTTATTGCAGGTTCATACACCAAGAATTTCAGGACGATTGATATGGGCAATTTCTGAACATTTTGATCTTGAAGGTCTGGATCCTCTTTTAGCTGATGACCCAGAGGATCCATTGAATATCATCATATCTAACATGCATAAGATTCTATTCAAGATCGATTCATCTACAACTACCTCAAGTAGGATACAAGATGTGCAGTCTGTCCTCATATGCGCTCAACGTTTGGGATCGAGAAATGCAAGAGCAGGCCAGCTCCTCACTAAAGAATTGGAGGAGTTCAGGGCAAGTACTTCAGCTGATTCTGTCACCAAGCATCAGTCGCGTTATGTCTTGCAAATAATAAAATATCTAACGAACCATCCTGATAACAGGTGAGTGTATTCTGAAACTCGAGTAACTAATTCTTTCACAAAGGGTCACCATTTATTTAGATATATACTGTCATAAATGTTGTACAACAGAAAAAAAAAATCTCTACTGGAACATGCATTAGGAAATTATGAAATGTCTAACTTTCCAATATTTATTCAGGTGGGTTGGTGTAGGTGATGCTACAGGGGATTATCCATTTAGCCACCACAAACTTACTGTTCAGTTTTCAGAGGCATCTGCAGCACAAGATAGGAAATTGGAAGGATTAGTTCACAAGGCCATCGAAGAGCTTTGGAGGCCAAATCCCACTCAGTTGACTCTCCTACAAATGAAGGGGATTGGTGCTTTGCACAAAGAGCTTCCAAAAACACTTACTTTGACTGGCAGCAGTGATCCATGCTATATTGAGGCATATCATCTGGCAGATCCAACTGATGGGAGAATCACCTTACATCTAAAGGTATGGCCTGATCGATGCATCTTTCCCTTGTTTGCTTAACAGTATCTTCATTTTATTGTACTTTTCTGTTTTGGTCTCTGTTAAATGCTGTTTAGGGACAATTTAGCTCTTAACGTGGAGATAGTTATCTTGGGGGGCTGGGGTAAAATTGCCAGCAGTTTTTTGCCAACACTGTAAATACTATATTATTAAAAAATAGGAACCAATATTCTTATGCAACCTATTGGCCACAGTTTTCTCATTTTAAGGCCATATTATGTGTGGCCTTATCATGGTGGATCTTCAGTGTTAGCTCCAGCACTGTGCAATTGTATTTTTGTATTTGTTACCTGGTAGCAGGTAGGTTGATTTTAGAAGTTAAAACAACCATGTGTGGTTCCACATATATTTCTTTTCTCTGAACTATAGAATTTTTTGACCTGGAATTGTATTATCATGTTGTTTGACTAGTTTATGTTGTTGCAGATTTTAAATTTGACTGAGCTGGAACTCCACAGGGTTGATATCAGAGTTGGTCTCTCTGGAGCACTGTATTATATGGATGGATTCTCCCGCACAGTTCGGCACCTACGTAATCTTGTTTCCCAGGTGCTTATACTAATCTAAATGTGCCTATTTTGCTGATGTTCTTAGTATAAACTATACAATTACCCATCAATAATTTAAAACTAGTGTAGTGCCCCTTGTGTTGCTAGGGATCTGAAATATATAACATCACCATAAATTCTGAACTTAAACAAATTAAAATAATTATCCTCGAGTATAAAATTTCACACGCATAATTCACATATTAGATCAACCAACTCTTATTTTAATCCACCTTATGTGGAAAATGCCTTTCCATTCTGCAGGATCCAGTCCAAAGTAGTGTAACTGTTGGAGTTTCGCACTTTGAGAGATGCTCCCTCTGGGTTCAAGTCTTGTATTACCCATTTTATGGAAGTGGAGGGTCTGCAGACTATGAAGGAGATTATGCAGAGGAGGACTCACAAACAGTTAGGCAGAAACGCTCACTTAGGCCGGAGCTTGGTGAGCCAGTTGTTTTGCGGTGCCAGCCCTACAAGATCCCCCTTGCTGAACTTCTCTTGCCATATGAGTGCTCCCCAGTTGAGTATTTCCGGCTATGGCCAAGCTTGCCAGCCATGGTGGAGTGCACTGGCACATACACATATGAAGGTAGTGGTTTCAAGGCCACTGCTGCTCAGCAGTACGACAGCTCTCCTTTCCTCAGTGGGTTGAAGTCGATTTCTTCTAAGCCCTTCCATCAAGTCTGCTCTCATTTCATCCGAACAGTAGCCGGGTTCCAGGTAAGCATTTTGAATAATCTGTGTCACTTGAGTCATGTTACCATCCTCTTTATTCTTTCATATACATAACTATCAAAATTCTTGGGTTATAACTCATTTGATCTCCTACAGTTATGTTATGCCGCGAAGACATGGTTTGGTGGGTTTGTGGGCATGATGATCTTTGGCGCAAGCGAGGTCAGCCGGAATGTTGATCTTGGCGATGACACGGCCACAATGATCTGCAAATTCGTCGTGCGTGCCTCCGATGAATCCATCACAAGAGAGATCCAATCAGACCTCCAGGGCTGGCTGGATGACATCACCGACGGCGCCGTGGAATACATGCCGGAGGAAGAGGTGAAGAGCGCGGCGGCTGAGCGGCTGAAGGTTTCCATGGAGAGAATAGCCCTGCTCAAGGCGGCCAAGCCGAAGGTGCCACCGGCGAAAACCAAGGAAGAAGAGGAAGAGGAGAAGAAGGAGCAAGAGGACCTGGACGAGTTTGGGAACCCCAAGGGCCCCTCGACGCTTTCCAAGCTGACGGCGGAGGAGGCCGAGCACCGTGCGCTCCAGGCCGCCGTGCTGCAGGAGTGGCACCAGCTGTGCAAGGAGAAAGCCTTGAAAGCACAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009191