BGIOSGA009200

From RiceWiki
Revision as of 03:27, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009200| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009200, complete gene.| tag = OsI_092...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009200

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009200, complete gene.

LocusTag

OsI_09271

Ensembl Transcript ID

BGIOSGA009200-TA

Ensembl Protein ID

BGIOSGA009200-PA

Length

5927

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35907043..35912969

Sequence Coding Region

35907043..35907291,35907682..35907796,35908213..35908323,35908431..35908603,35908702..35909028
,35909132..35909257,35909879..35911105,35911203..35911364,35911531..35912254
,35912340..35912433,35912807..35912969

Genome Context

<gbrowseImage1> name=IndicaChromosome02:35907043..35912969 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:35907043..35912969 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGAGGCGGAGGAGGAGCTGATGCACAGGAGGATTGAGTTCCACGCGGCGAGTAGGCCGCCGCGTGCGGTGGAGGGGGCGGGAGGGAGGTTTTGGGTGGAGATCCTGAGCCCGGATGCCGATAAGGCGGCGGTGGTGGCGGCGGCGAGGAGCGAGGGGCTGGTCAGGGGGTTGGAGAAGGGGGAGGGTAGCGGGGGTGGGATCGACCCGGAGCTTCGCGTCGCGAGGATGTACTTGCGGAGAATTGGAGCTGGCTTGCAAAATTTTGGCAATACCTGCTACCTCAACTCGGTTCTGCAATGCTTGACGTATACCGAGCCGTTCGTGGCCTACTTGCAGAGTGGGGAGCACATGTCCTCATGTCGGACTATCGGATTCTGTGCTTTATGTGCTCTTCAAAGACATGTAAATTCTGCTCTACAGTCAACTGGGAAGATATTGAGACCTGTGCACATTGTCAGAAATTTAAGATGCATTTCTCGTAGTTTCCGCATCTCAAGGCAGGAAGACGCACATGAGCTAATGGTTAGATTGCTTGAGTCCATGCACAAATGTTGTTTACCTTCTGGTGTACCAAGTGGGTCGCCAAGTGCTTATGAGAAGAGCCTAGTTCACAGAATATTTGGTGGTCTCTTAAGAAGTCAGGTGAGATGCACAACTTGCTCACACTGTTCCAACAAATTTGATCCTTTCCTGGATCTCAGCCTTGAAATTGCCAATGCTGCTACTCTGGTAAAAGCACTTCAACACTTTACTGCGGAAGAGCTACTGGATGGTGGGGAAAAGCAGTACAACTGCGAGCACTGCAGGCAGAAAGTAGTAGCCAAGAAGAGGTTTATGATTGAGAAGGCTCCCTCTGTGTTGACAATTCATCTAAAGCGCTTTAGTCCTTTCAACCCTTGTCACAAGATCGACAAAAAAGTGCAGTTTCAACCAACTTTAAATTTAAAGCCATATGTCAGCAATCCTGAGGGTATGGAGTTCAAATACAGCCTTTATGGTGTTTTGGTTCATGCTGGTTGGAATACACAGTCAGGTCACTATTATTGCTTTGTTCGGACTTCTAGTGGCATATGGCACAATCTTGATGATAACGAGGTTTACCAAGTTCGTGAGGCAGATGTGCTGAGGCAGAAAGCATACATGCTATTTTATGTGCGCGACAGAACAAGGAGCTCAGTGATGTACAGTGATAATTGTACTGTTAATTTATCAGTAAATAAAATGATCTCCGAGAAGATCACATGTATGAATGGTTCAATTAAAAAAGATACAGTGGAAACGAAAACACTGAGAGTTCCCTCATTTGTCAAAGAAGATGTGAACTTGAAGAAACAGAACTCAGAAAATGGTCAATCTAGCAATATTAGCAATGCTCCACAGGACCAGTGTTCAAAAAGTCATAGCAACACTGAAGTGCTTGAAGCTGCAGCATCCCCAAACAATGACCCAGCTTCAACACAGAAAGCTTCTTGCATACGTCCAGATACAGCTGCTGTTAACTTGCCCATGAAAACAGAGCAAATAGCTCCAGACAATCGAAGGGAAATAACATCTCCAGCACAAGCTGATGTTTCTGTTCTTCACAATGCAAGTTTCAATCAGAAGTTGTATGAGAAGCAGCTACAGGAGCATCAACTAGAAACTGATGATGCACTTACTGATTCCAGGAAAGATGCCCCTGCTGCCTTGTGCACATATGGTGTTGGGGATGGTTTGTTGGGGAGAAATGGCCAGTCTTCTGAACCTCACATAGGTCCATGCCCTGCTGCTCTTCCTATACACAATGGTGGTGAAGGATTGCTGGGGCCAAATGGCCAGGCATCTGAAGCTCACTCAGGTCCTTGCTCTTCTGCGTTTCCTATACATAATGGTGGCGAAGGATTGTTGGGGGCAAGTGGCCAGTCTTCTGAACCTCACACAGGTCCATGCCCTGCTGCTCTTCCTATACACGATGGTGGTCAAGGATTATTGGGGCCAAATGGCCAGGCTTCTGAACCTCACACAGATTCTTGCCCTGCTGCCTTTCCTATACACAGTGGCGGTGAAGGACTGTTGGGGGCAAATGGTCAGGCTTCTGAACTTCACACAGATCCTTGCCCTGCTGCCTTTCCTATACACAGTGCCGGTGAAGGATTGTTGGGGGCAAATGGCCAGGATTCTGAACATCGAACAGGTCCAATCCCTGCTGCCTTTCCTGTATGGAATGGCACTGGTGTAATATTGGAGAAATATGGTCAGGTTTCTGGGCCAGCAGATCCATTTTGCAAGCCAACTCCTACCATAAGTGATACAGTGTCTATTGCACAAATCATCCCAACTGAGCATGCTGCTGTTTCTAATGGAACAGTATCTAGTAGTGATGATTTAACTGGCAATACTGAAGCTAACGAGTCATCAGAGTTTGTAAAGAATTATGGCGAACAAGTTATGGTGAGGGATCTTTCTGCAGAGACCTCTGGTGATAGAGCAAATGCAGATGAGCAGACTTCAATGCAGAATAACACACTGGAAGTTGGTAAGGATGTTGCAAAGGACACTGATAATGTGGCAAATGCCGAGGAGCAGGTATTGAACCACCCCTTGGCCGAGCAGGTAAAATCTGAGAAGCAAATATATCCTGGAATTTCTACAACATTGATTTGCTCTGAAGACACAACACAGTTGATAGATAAGGATACAGGCAGTGGCAAATTAAATAAAAAGATGAATTGCAAGTCAAAGAGGCAAGTGAAGTATCCTGCTGTTCGCATGTTTTTTGGGCCCAAACAACTGTTACTGGCATCAGTAAAACTGCACAAGAAAAGGAAACACAAGAGATCCAAAAAACACCATGCACTTTCTGTGCACATTGAAAGCATCATCACTGATCAGCAGACATCAACATCAGAAACTGTTTTCTCAAAGATCATATCACATAAATCCCGTGGACAGAAACGTTCTTGTGCCAGTGCAAGTTCTGAGGATGGCACTCAGCTGTTCAACAAGAAACAGCATATCGAAGGAACCACCAACAGTGTTCCCATGGACAACAACGATACAAAACTTGCTAGCGCTGACAGCAACGATGCAAAACTTGCTAGCGCCGAGCTACCAAGCTCATGTACAAACTCTCTGGTGAACCAGACTGATTCAAGAAACAATGTAAATGCAAATGAGAGAGGCCCCTGGCATTTTAATCTCCTCACAAGGGGTTTAAGAGAAATTACTGTGCCACGTTGGGATGACACTGAGATTAAAAATACGAAGGAAACAGAGATACTACATCCAAGGACTAGAAGCATCGGCTATGTGCTAGATGAATGGGACGAGGAGTATGATCGCGGCAAGAGAAAGAAGATCAGGAAACCAAAGCATGGCTTCAGTGGGCCGAACCCTTTCCAGGAGACGGCCAACATCAGATCACGGCAGAGGATGAGACTACAGTCTGACCAGACCAAATCTGGGAACCAGCCTCTCAGGATATAA</cdnaseq>

Protein Sequence

<aaseq>MGEAEEELMHRRIEFHAASRPPRAVEGAGGRFWVEILSPDADKAAVVAAARSEGLVRGLEKGEGSGGGIDPELRVARMYLRRIGAGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTIGFCALCALQRHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVRLLESMHKCCLPSGVPSGSPSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANAATLVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPCHKIDKKVQFQPTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDDNEVYQVREADVLRQKAYMLFYVRDRTRSSVMYSDNCTVNLSVNKMISEKITCMNGSIKKDTVETKTLRVPSFVKEDVNLKKQNSENGQSSNISNAPQDQCSKSHSNTEVLEAAASPNNDPASTQKASCIRPDTAAVNLPMKTEQIAPDNRREITSPAQADVSVLHNASFNQKLYEKQLQEHQLETDDALTDSRKDAPAALCTYGVGDGLLGRNGQSSEPHIGPCPAALPIHNGGEGLLGPNGQASEAHSGPCSSAFPIHNGGEGLLGASGQSSEPHTGPCPAALPIHDGGQGLLGPNGQASEPHTDSCPAAFPIHSGGEGLLGANGQASELHTDPCPAAFPIHSAGEGLLGANGQDSEHRTGPIPAAFPVWNGTGVILEKYGQVSGPADPFCKPTPTISDTVSIAQIIPTEHAAVSNGTVSSSDDLTGNTEANESSEFVKNYGEQVMVRDLSAETSGDRANADEQTSMQNNTLEVGKDVAKDTDNVANAEEQVLNHPLAEQVKSEKQIYPGISTTLICSEDTTQLIDKDTGSGKLNKKMNCKSKRQVKYPAVRMFFGPKQLLLASVKLHKKRKHKRSKKHHALSVHIESIITDQQTSTSETVFSKIISHKSRGQKRSCASASSEDGTQLFNKKQHIEGTTNSVPMDNNDTKLASADSNDAKLASAELPSSCTNSLVNQTDSRNNVNANERGPWHFNLLTRGLREITVPRWDDTEIKNTKETEILHPRTRSIGYVLDEWDEEYDRGKRKKIRKPKHGFSGPNPFQETANIRSRQRMRLQSDQTKSGNQPLRI</aaseq>

Gene Sequence

<dnaseqindica>1..249#640..754#1171..1281#1389..1561#1660..1986#2090..2215#2837..4063#4161..4322#4489..5212#5298..5391#5765..5927#ATGGGGGAGGCGGAGGAGGAGCTGATGCACAGGAGGATTGAGTTCCACGCGGCGAGTAGGCCGCCGCGTGCGGTGGAGGGGGCGGGAGGGAGGTTTTGGGTGGAGATCCTGAGCCCGGATGCCGATAAGGCGGCGGTGGTGGCGGCGGCGAGGAGCGAGGGGCTGGTCAGGGGGTTGGAGAAGGGGGAGGGTAGCGGGGGTGGGATCGACCCGGAGCTTCGCGTCGCGAGGATGTACTTGCGGAGAATTGTGAGTGTGTAAGCCTGCAATTTTTCGTTTCACATTTTGTTGAATCTAGGTAGCATAGTATATACATGTAGGGTAGGTGGTTTTAGTTGTTGCAGTTCAGATTATTAGAGGGGTTTTGGTTTACGAATAGAATCAGTAATTATAAGATACATTTTATGAATTTTCCTTCAGAAATGCTGGTTTGTTGTTCTGTAATGAAAAAAATATATTCACGTTTAACTGTATTATGTTTTGTTTAGAATACATTTTGGAATAGTTATGCGCAAAAATTTGCATCCGCGTATTGAAGGTCCTTTTTACTGGAGGAATCTGCTCATTCACCTGAAACACGAGGCTTTGCAAGTGAATACTTCACTAAAGATGCCCTATTGCCCTATCTATGTAAAACAGGGAGCTGGCTTGCAAAATTTTGGCAATACCTGCTACCTCAACTCGGTTCTGCAATGCTTGACGTATACCGAGCCGTTCGTGGCCTACTTGCAGAGTGGGGAGCACATGTCCTCATGTAAGTTCATTGCGTCTGGTCGCGATCAGCAATTCAGATACTCTGCATGATATGATGATGTTGTCAATGAAAGTCGAGAGTAGTGAACCATCCTTTGTTGCTGTCTGTGAGCACTCTGCATTTTCTTATCGGATGTTCTATGGTGGTGGTTATCAAATATATTTCCTCTCTCTATAATCAGTCTCGAGGCATCTAGAGCTAGAGCTGCTTCTTATCTATTTGGATTGAACGAAACAGATATAAATTTTAGTTTACATGCCTTGACCAATGTACTATGTCTCATCACCTGTTCTGGAGCAACCTCTGTTTTTTGCGGCTGTATCATTTCTCCAGAGAACAATATAATAACATTTTCTGTTTTCTTGGCAAGCCCTGTTTCTGTAGTTACTTATAATATCACTTTATTATTTTTTAAGGTCGGACTATCGGATTCTGTGCTTTATGTGCTCTTCAAAGACATGTAAATTCTGCTCTACAGTCAACTGGGAAGATATTGAGACCTGTGCACATTGTCAGAAATTTAAGATGTATCCTTTCATATGCTATTGCAAAATAATTGATCCACTTTATTTTGAAATACCGTATCTATCTATAATTTTATTCAACCCTTGTGCAATCTTTAACTGCAAGGTAGGCATTTCTCGTAGTTTCCGCATCTCAAGGCAGGAAGACGCACATGAGCTAATGGTTAGATTGCTTGAGTCCATGCACAAATGTTGTTTACCTTCTGGTGTACCAAGTGGGTCGCCAAGTGCTTATGAGAAGAGCCTAGTTCACAGAATATTTGGTGGTCTCTTAAGAAGTCAGGTAAATTGCCAAATGCTTAATTAACTTATTACTAGTATAATAGCAAGTAAAACTTTACCCATATGGCCACTGGCTGACTATATCTATATGCATGACAGGTGAGATGCACAACTTGCTCACACTGTTCCAACAAATTTGATCCTTTCCTGGATCTCAGCCTTGAAATTGCCAATGCTGCTACTCTGGTAAAAGCACTTCAACACTTTACTGCGGAAGAGCTACTGGATGGTGGGGAAAAGCAGTACAACTGCGAGCACTGCAGGCAGAAAGTAGTAGCCAAGAAGAGGTTTATGATTGAGAAGGCTCCCTCTGTGTTGACAATTCATCTAAAGCGCTTTAGTCCTTTCAACCCTTGTCACAAGATCGACAAAAAAGTGCAGTTTCAACCAACTTTAAATTTAAAGCCATATGTCAGCAATCCTGAGGTATGTAATTTTTAATGGTGTTCTTTTTTTTTTTAACATAAGTTTGGACATGTTTTTAATAAGATTCTCTTTCATGCTCATAGTCCTTAGTTTATGTGTGTAGGGTATGGAGTTCAAATACAGCCTTTATGGTGTTTTGGTTCATGCTGGTTGGAATACACAGTCAGGTCACTATTATTGCTTTGTTCGGACTTCTAGTGGCATATGGCACAATCTTGATGATAACGAGGTTATTCTTTTTTATGTTGTGATGAATTTATTCTTACTGTTTATCATTGACACAACCCTTTTTTACATTAATGCAAGTCACATCCTTGTATTGTGCCATATTGCTTTTTTAAAGTTACTCTTTTTTTTTTTGCCTCCATCAACCATGTCTTGTCCTGTGTAATAACAAATACCAGCCAAAATACACCATGTTATATCCAAAAACATTCAATGGTGAAGTCGACCACCTCTATAGTCTATACTTATGTCCCTCACTCTCTGCTCACAAGAGTTCACCTTGTAATATGTCTTCTTAAAATAGTACTAGTACTTTATGAATGCTAGAGAACTTGTTTTGTCAGTCACCTTCTTCGTGCACTATATTATGTAGTGGTCTACAGTCAACTTAAGGGAGGATATGGGGAATGTGTTCACTTTGAGGGATGGAGGGTAATCCTTTTCTTTGGCCTGTTTATGTGTTCATTTTCTGTTGGTGGGATTGGTACACCAAGTTGTAGTTGAGCTGATCTTATGTTAATTCAGTACTTTCTCATCTGCACTCCTGACATTCTTTATTCAGTTTCTTCCTCTCTTTTTTTTTTATTTTGAAGTTTGTTTTGTTGATATACATTAATACACCCAGGTTTACCAAGTTCGTGAGGCAGATGTGCTGAGGCAGAAAGCATACATGCTATTTTATGTGCGCGACAGAACAAGGAGCTCAGTGATGTACAGTGATAATTGTACTGTTAATTTATCAGTAAATAAAATGATCTCCGAGAAGATCACATGTATGAATGGTTCAATTAAAAAAGATACAGTGGAAACGAAAACACTGAGAGTTCCCTCATTTGTCAAAGAAGATGTGAACTTGAAGAAACAGAACTCAGAAAATGGTCAATCTAGCAATATTAGCAATGCTCCACAGGACCAGTGTTCAAAAAGTCATAGCAACACTGAAGTGCTTGAAGCTGCAGCATCCCCAAACAATGACCCAGCTTCAACACAGAAAGCTTCTTGCATACGTCCAGATACAGCTGCTGTTAACTTGCCCATGAAAACAGAGCAAATAGCTCCAGACAATCGAAGGGAAATAACATCTCCAGCACAAGCTGATGTTTCTGTTCTTCACAATGCAAGTTTCAATCAGAAGTTGTATGAGAAGCAGCTACAGGAGCATCAACTAGAAACTGATGATGCACTTACTGATTCCAGGAAAGATGCCCCTGCTGCCTTGTGCACATATGGTGTTGGGGATGGTTTGTTGGGGAGAAATGGCCAGTCTTCTGAACCTCACATAGGTCCATGCCCTGCTGCTCTTCCTATACACAATGGTGGTGAAGGATTGCTGGGGCCAAATGGCCAGGCATCTGAAGCTCACTCAGGTCCTTGCTCTTCTGCGTTTCCTATACATAATGGTGGCGAAGGATTGTTGGGGGCAAGTGGCCAGTCTTCTGAACCTCACACAGGTCCATGCCCTGCTGCTCTTCCTATACACGATGGTGGTCAAGGATTATTGGGGCCAAATGGCCAGGCTTCTGAACCTCACACAGATTCTTGCCCTGCTGCCTTTCCTATACACAGTGGCGGTGAAGGACTGTTGGGGGCAAATGGTCAGGCTTCTGAACTTCACACAGATCCTTGCCCTGCTGCCTTTCCTATACACAGTGCCGGTGAAGGATTGTTGGGGGCAAATGGCCAGGATTCTGAACATCGAACAGGTCCAATCCCTGCTGCCTTTCCTGTATGGAATGGCACTGGTGTAATATTGGAGAAATATGGTCAGGTTTCTGGGCCAGCAGATCCATTTTGCAAGCCAACTCCTACCATAAGTGATACAGTGTCTATTGCACAAATCATCCCAACTGAGGTAACTGTATGATGTTTCCTATTGATCTCTCTCTCTCTTTTTAATTTTTAAACACATTATTAATGTTAATTCTGCTGCTCACATCACAATATGGCAGCATGCTGCTGTTTCTAATGGAACAGTATCTAGTAGTGATGATTTAACTGGCAATACTGAAGCTAACGAGTCATCAGAGTTTGTAAAGAATTATGGCGAACAAGTTATGGTGAGGGATCTTTCTGCAGAGACCTCTGGTGATAGAGCAAATGCAGATGAGCAGGTATTTCCTCTCTACCTTTTATGTTGTTTGCAGATGTATTTTCACCCATGCTGTGGTCCCATATTACAATGGATATACCATGTGTTCTCTGCTGTTCTATGCATGAAAACAGACCTTTTATTCGTATTGGTGCATGTAAGTTTATTTGTTAAAAACTACTTTGCAGACTTCAATGCAGAATAACACACTGGAAGTTGGTAAGGATGTTGCAAAGGACACTGATAATGTGGCAAATGCCGAGGAGCAGGTATTGAACCACCCCTTGGCCGAGCAGGTAAAATCTGAGAAGCAAATATATCCTGGAATTTCTACAACATTGATTTGCTCTGAAGACACAACACAGTTGATAGATAAGGATACAGGCAGTGGCAAATTAAATAAAAAGATGAATTGCAAGTCAAAGAGGCAAGTGAAGTATCCTGCTGTTCGCATGTTTTTTGGGCCCAAACAACTGTTACTGGCATCAGTAAAACTGCACAAGAAAAGGAAACACAAGAGATCCAAAAAACACCATGCACTTTCTGTGCACATTGAAAGCATCATCACTGATCAGCAGACATCAACATCAGAAACTGTTTTCTCAAAGATCATATCACATAAATCCCGTGGACAGAAACGTTCTTGTGCCAGTGCAAGTTCTGAGGATGGCACTCAGCTGTTCAACAAGAAACAGCATATCGAAGGAACCACCAACAGTGTTCCCATGGACAACAACGATACAAAACTTGCTAGCGCTGACAGCAACGATGCAAAACTTGCTAGCGCCGAGCTACCAAGCTCATGTACAAACTCTCTGGTGAACCAGACTGATTCAAGAAACAATGTAAATGCAAATGAGAGAGGCCCCTGGCATTTTAATCTCCTCACAAGGGGTTTAAGAGAAATTACTGGTTAACATCTCTTCGCAAGAAATTTCTCATTTTCCATCCTGCTGTCAACACTAGAAATTTATAACTCATCGTTTTGTTTTTGCAGTGCCACGTTGGGATGACACTGAGATTAAAAATACGAAGGAAACAGAGATACTACATCCAAGGACTAGAAGCATCGGCTATGTGCTAGATGAATGGTAAGCCTGTTAACTGCAGTTAAATTTCTTTCTGATGGTGATGTTGGGATGTCTCAATTCTCTTGATGCTGAAATTCGGAAAATCCTCCACCCATACCAAATCTTTGCTAAACTTCTGAGTAATATACGAACAACTGGCATGAACATAACACTGGTTCCTAGGTCCGACTTGAACTAATTTTAGAATCCTACTAGAATATGCAACCAGCAGCAGATTCTTCTTTGCTGTGACTAAGATCTGAGATGAATATAAAGCCCTCTTCTTTTTTTGTATATATCTCGGTTTTCCTCTTGCCTGTTTGTTATCCTTGAAACTGTCTTATTCGGAAGATAAACATGATCCTTAACAAGATGCACCTAATCGTTGTGTCAGGGACGAGGAGTATGATCGCGGCAAGAGAAAGAAGATCAGGAAACCAAAGCATGGCTTCAGTGGGCCGAACCCTTTCCAGGAGACGGCCAACATCAGATCACGGCAGAGGATGAGACTACAGTCTGACCAGACCAAATCTGGGAACCAGCCTCTCAGGATATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009200

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA009200&oldid=62752"