BGIOSGA009226

From RiceWiki
Revision as of 03:28, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009226| Description = HeparanasePutative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009226, complete gene.| tag...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009226

Description

HeparanasePutative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009226, complete gene.

LocusTag

OSJNBA0032L17.36

Ensembl Transcript ID

BGIOSGA009226-TA

Ensembl Protein ID

BGIOSGA009226-PA

Length

3743

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36238737..36242479

Sequence Coding Region

36238737..36238982,36239669..36239705,36239976..36240159,36240251..36240399,36240797..36241030
,36241118..36241307,36241389..36241514,36241911..36242010,36242120..36242479

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36238737..36242479 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36238737..36242479 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGGGCTACTGCTGAAGCTGGTCGGGTTCTGCTTCTGGGCCGTCTTCTGGCTCGGCGGCGCCGCCACCGTCAGCACCAACGCCGGCGGCGAGGCGGCGGCGGCGGCGGTGGTGGTGGACGCGCGGTCCGCCATTGCTGTGACGGACGAGGACTTCGTGTGCGCGACGCTGGATTGGTGGCCGCCGGACAAGTGCGACTACGGCACCTGCAGCTGGGGACTCGCCACCCTCCTCAACATGGATCTTTCAAACAAAATCCTGTTGAATGCCGTCAAAGCATTCTCACCTCTGAAGCTTAGGCTGGGAGGATCCTTGCAGGATGTGTTGATATACGACACCGGCGATCCTCGGCAGCCGTGCACTCCGTTCACGAAGAACTCATCGGCCATGTTCGGTTTCACTCAAGGTTGCCTGCCGTTGCATAGATGGGACGAGCTCAATGCATTCTTCCAAAAATCAGGAGCAAAAATTATCTTTGGGCTGAATGCTCTGAATGGTAGGGTTCCAATGTCTGATGATTCTTTAGGAGGGCCATGGAATTACACCAATGCGGCTTCCTTCATTCGCTACACTGTCAGCAAGGGCTATGACATCCATGGATGGGAACTCGGAAATGAACTCAGTGGCAGTGGAGTTGGAGCTCGAGTTGATGCAGACCAATATGCACAAGATGTTCTAGCTCTGAAACAAATCATTGACAACTCCTACCAAGGCCATGCATCAAAGCCACTGGTGATCGCACCGGGAGGTTTCTTTGATGCAGCCTGGTTCACTGAGCTTATCAGCAGAACAAAGCCAAACCAGATGGATGTGATGACTCACCACATCTACAATCTAGGCCCTGGCGTCGACACGCACCTGATTGATAAAATTCTTGACCCGTCTTACCTCGACGGCGAGGCCGGCACATTCAGCAGTCTCCAGGGGATACTGAAGTCTGCAGGGACGTCCACCGTCGCGTGGGTCGGCGAGGCTGGAGGCGCTTACAACAGTGGTCACCACCTTGTAACTGATGCTTTTGTGTTCAGCTTCTGGTACTTGGATCAGCTAGGAATGTCATCTAAGTATGACACAAAGACCTACTGCAGACAGACCTTGATTGGAGGGAACTATGGTCTGCTCAACACAACAACGTTTGAACCAAACCCTGATTACTACAGTGCTTTACTATGGAACCGCCTCATGGGAACCAAGGTTCTCTCGGCAACATTCAACGGCACTAACAAGATCCGCGCTTACGCACATTGCGCAAGAGATTCACGTGGGATCACTCTACTCCTGATCAACCTCAGTGGCAACAACACAAACCATATCTACATGACGAGCGAAGGCGTGCAACCTTACAGCACAAAGAAGGAGGGCCGCAGAAGGTTCGGACGCATCCCCGGGCTCGGCGAAGAAGCTCAGCTCATCAGAGAAGAGTACCATCTCACCCCCAAAGATGGGAGCCTGCAGAGCCAGCATGTGCTGCTGAATGGCAATGTGTTGGCACCTGATGCCAATGGAGAGATCCCTAAGCTGGAGCCTGTGCAGGTGGAGGGAACACAGCCCATAACAGTGGCTCCTTACTCCATTGTGTTTGCTCATATTCCCAGATTCTATGCTCCTGCCTGTAGGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAGLLLKLVGFCFWAVFWLGGAATVSTNAGGEAAAAAVVVDARSAIAVTDEDFVCATLDWWPPDKCDYGTCSWGLATLLNMDLSNKILLNAVKAFSPLKLRLGGSLQDVLIYDTGDPRQPCTPFTKNSSAMFGFTQGCLPLHRWDELNAFFQKSGAKIIFGLNALNGRVPMSDDSLGGPWNYTNAASFIRYTVSKGYDIHGWELGNELSGSGVGARVDADQYAQDVLALKQIIDNSYQGHASKPLVIAPGGFFDAAWFTELISRTKPNQMDVMTHHIYNLGPGVDTHLIDKILDPSYLDGEAGTFSSLQGILKSAGTSTVAWVGEAGGAYNSGHHLVTDAFVFSFWYLDQLGMSSKYDTKTYCRQTLIGGNYGLLNTTTFEPNPDYYSALLWNRLMGTKVLSATFNGTNKIRAYAHCARDSRGITLLLINLSGNNTNHIYMTSEGVQPYSTKKEGRRRFGRIPGLGEEAQLIREEYHLTPKDGSLQSQHVLLNGNVLAPDANGEIPKLEPVQVEGTQPITVAPYSIVFAHIPRFYAPACR</aaseq>

Gene Sequence

<dnaseqindica>1..246#933..969#1240..1423#1515..1663#2061..2294#2382..2571#2653..2778#3175..3274#3384..3743#ATGGCGGCGGGGCTACTGCTGAAGCTGGTCGGGTTCTGCTTCTGGGCCGTCTTCTGGCTCGGCGGCGCCGCCACCGTCAGCACCAACGCCGGCGGCGAGGCGGCGGCGGCGGCGGTGGTGGTGGACGCGCGGTCCGCCATTGCTGTGACGGACGAGGACTTCGTGTGCGCGACGCTGGATTGGTGGCCGCCGGACAAGTGCGACTACGGCACCTGCAGCTGGGGACTCGCCACCCTCCTCAACATGGTCTGTGTTTTTCTTTCTTTTCTTTTCTTTTTTTTTCCTTTCCCATTTCATGTTAAGTTGTTTGGAAAGTTTTTCAAATTTGAGTTCCAGAATTGACAGTAAATTTAGTAGTTTAGTATATCATCTCGTTGCAATGCGATTCCGTAGAACATGGACGTGGTTTTCAAGGATGTTTCTTGTGCAAATGCATTTCTTTCTCTCTTTTTTTTTATGTAGTCGGCAACGGTTTGGTTTGGATCTTTTTGGGAGCTGTGTTGGATAGGAATTTGACGGCCTAGGGAGTTTCATGGACCTATAATTTTGTCGGTCCATTTGCATTTCCATTTGCATCACAACCTTTTCCTACCAAATCATGTGCAAATGTAAAGCCTACTACCTTAAAGAATGTTTGGGTCAGGTTTTTATGAAAAGAGGTACACAGTGGTAGGAAAGGTAGCAACAGTAGTTTATTTTGTTGCGTGCCTCTTCAACTCAACTGTGATTTTTTTTTAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAGCAAGAACTCAACTGTGCTAGCTTGGAAGTTGGGATTCTTTGGTTGCTACCTTGCAAAAGTGTACAATAATTATGGTCATGAGCACGGGTGATTATCTGATTGACACAGGTCTTTAATGATTATCTGATTGACACAGGTCTTTAATGTTTTCCTCCGCAGGATCTTTCAAACAAAATCCTGTTGAATGCCGTCAAAGGTAAGCTACTACATGGTCATCACTTTCAGTTGCATGAATGCTGTCTTACTGTCCAATCAAAAGAAGAAGAAAATTTTTTAGGTCCATGTCATGCTTCAAGAATCTTTCAGAATAAAAATTAAACATGAGACAAGCAAGCTCAAGAAGTTGACCGGCAAAACGATTTCCTGTCTTTGCTGGGAATATTTCAGAGCCGTCCATTTTCAATCTGACAACGGTAATTCGCAGTTGGTACAATGGTCAAGTGACTGCAGCTAATTCATTTTGCAGCATTCTCACCTCTGAAGCTTAGGCTGGGAGGATCCTTGCAGGATGTGTTGATATACGACACCGGCGATCCTCGGCAGCCGTGCACTCCGTTCACGAAGAACTCATCGGCCATGTTCGGTTTCACTCAAGGTTGCCTGCCGTTGCATAGATGGGACGAGCTCAATGCATTCTTCCAAAAATCAGGGTACTTCCAGTGTATTCAGCTCGATTCAGCCTCAAAAAAGCAATGTTTTGTTTGGACTTTTGATTACTGATTGGATACTTTATGGATGCAGAGCAAAAATTATCTTTGGGCTGAATGCTCTGAATGGTAGGGTTCCAATGTCTGATGATTCTTTAGGAGGGCCATGGAATTACACCAATGCGGCTTCCTTCATTCGCTACACTGTCAGCAAGGGCTATGACATCCATGGATGGGAACTCGGTATGTTTGTTTTTGTGAGCTATCTTAGTTTAAAGAAGTTCTCTCTCTTTTGCAATGGTATTATTCTCAAGCTACTTTAGGTTAGGAAAAGAAATCTGATAGGTTGGCAGGAATGAGTCCAGACAAGTATGTCGACATCGATTTAGATAGTGTTGAGCTATCTATTAGTATAACGATCATAGATGATGCTTTTACTGGCTTTTCACGCGTCAATCTACAAAAGGGAATACTTTCATGTCATGTTCTTTGCTTTCCAAAGTTTTGCTTAAAGAGCAATTTATATCTGAACAATACTTTTGTACTAGCATTCTAGGAACTCAAACATACAGTCCTTGTTTTTTTTTAAAAAAAAAAAAGGGAATCCTTTTGTCTAAAAGAAAACATACTGTCCTTGTAGGAAATGAACTCAGTGGCAGTGGAGTTGGAGCTCGAGTTGATGCAGACCAATATGCACAAGATGTTCTAGCTCTGAAACAAATCATTGACAACTCCTACCAAGGCCATGCATCAAAGCCACTGGTGATCGCACCGGGAGGTTTCTTTGATGCAGCCTGGTTCACTGAGCTTATCAGCAGAACAAAGCCAAACCAGATGGATGTGATGACTCACCACATCTACAATCTAGGCCCTGGTATGATCCCTGTCACTGACCGTGAATTCAGTACATGAGCTCAAAGCTTCGAATCTGCCTAAATGGACAAAATTCTGAATATTTCAGGCGTCGACACGCACCTGATTGATAAAATTCTTGACCCGTCTTACCTCGACGGCGAGGCCGGCACATTCAGCAGTCTCCAGGGGATACTGAAGTCTGCAGGGACGTCCACCGTCGCGTGGGTCGGCGAGGCTGGAGGCGCTTACAACAGTGGTCACCACCTTGTAACTGATGCTTTTGTGTTCAGCTTCTGGTAAAGATTTTGGAGCATCATTTTCTTCTCAAGTTATCCTCTGAAGAAGCCATTACTGATTAGGCTTTAACAATTTTTCAGGTACTTGGATCAGCTAGGAATGTCATCTAAGTATGACACAAAGACCTACTGCAGACAGACCTTGATTGGAGGGAACTATGGTCTGCTCAACACAACAACGTTTGAACCAAACCCTGATTACTACAGGTAAATACATCTGCATGTCTATTTTTTTTTCTTGGAAAGGTTTTACCTAATGTGGAAGTACTTCATTGGAACATAGTTGTCCTACGCTGGATCATAAATAACAATACTTAATCATCCATGATGATGAACTGGCACCATAAACTTATTAGAATTAATGGGGGCATATGCCCTACATGTGCAGAATATATTCCAGCTATTAGAATCTTTTCTTTCCGGGAACAACCAATTATAAGAGTCTGACAGCACATACCTAATATAACCAAGCTAAAGATTGGTTCCACTGCATTCAATCTTATAGCAAAGCTAAAAAGATCGTTTCCACTGCATTCAATCTTATAGAGTGAAACAGTGTACCAAGGTCACCATCTTCATCCAACTTTTCTGGCTCTCTTTCAGTGCTTTACTATGGAACCGCCTCATGGGAACCAAGGTTCTCTCGGCAACATTCAACGGCACTAACAAGATCCGCGCTTACGCACATTGCGCAAGAGATTCAGTAAGTAGTATAACATGCAATTCAAACAAACAAAGGAGATCCCCTTTATCCGTCTGTGACGAAGTGTATCAGCTAACTGAACACTACCAAATTTCCTCTGAATTTTCAGCGTGGGATCACTCTACTCCTGATCAACCTCAGTGGCAACAACACAAACCATATCTACATGACGAGCGAAGGCGTGCAACCTTACAGCACAAAGAAGGAGGGCCGCAGAAGGTTCGGACGCATCCCCGGGCTCGGCGAAGAAGCTCAGCTCATCAGAGAAGAGTACCATCTCACCCCCAAAGATGGGAGCCTGCAGAGCCAGCATGTGCTGCTGAATGGCAATGTGTTGGCACCTGATGCCAATGGAGAGATCCCTAAGCTGGAGCCTGTGCAGGTGGAGGGAACACAGCCCATAACAGTGGCTCCTTACTCCATTGTGTTTGCTCATATTCCCAGATTCTATGCTCCTGCCTGTAGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009226