BGIOSGA009236

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Revision as of 03:28, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009236| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009236, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA009236

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009236, complete gene.

LocusTag

OSJNBA0049O12.22

Ensembl Transcript ID

BGIOSGA009236-TA

Ensembl Protein ID

BGIOSGA009236-PA

Length

4416

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36376848..36381263

Sequence Coding Region

36376848..36377075,36377176..36377237,36377327..36377414,36377959..36378222,36378300..36378540
,36378626..36378702,36378791..36378961,36379038..36379130,36379854..36379973
,36380199..36380401,36380502..36380651,36380734..36380881,36381001..36381084
,36381162..36381263

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36376848..36381263 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36376848..36381263 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTACGTGGTGAAGCGCGATGGGCGGCAGGAGGCGGTCCACTTCGACAAGATCACCGCGCGGCTCAAGAGGCTCAGCTACGGCCTCAGCCAGGAGCACTGCGATCCGGTCCTCGTCGCGCAGAAGGTCTGCGCCGGCGTCTACAAGGGCGTCACCACCAGCCAGCTCGGCGAGCTCGCGGCGGAGACCGCCGCCGCCATGACCGCCTCCCACCCCGACTACGCCTCGCTCGCCGCGAGGATCGCGATCTCGAACCTGCACAAGACCACCATGAAGTCTTTCTCAGAGACGATAAAGGTCATGTACATGCATTACGATGAGCGATCTGGGCTGTTGGCTCCTCTGATTGCCGATGACGTCTATGAGATCATCATGAAGAATACCACCCGCTTGGACAGTGAGATAATTTATGACAGAGATTTTGACTATGACTACTTTGGTTTTAAGACCCTTGAGAGATCTTATCTGTTAAAAGTTGTTGGGAAGGTTGTGGAAAGACCACAGCATATGCTAATGAGAGTTTCTATTGGGATACACAAGGATGATATTGAATCTGCTATCAAAACGTACCACATGATGTCTCAGCGCTGGTTTACTCATGCTTCGCCAACCCTTTTCAATGCTGGCACTCCAAGGCCTCAATTAAGTAGCTGCTTCCTCATCTGCATGAAAGATGATAGCATTGAGGGAATTTATGATACTCTCTCAGAATGTGCTACCATAAGCAAATGTGCTGGTGGAATTGGTCTCTCAATTCACAATATTAGAGCTACTGGGAGTTACATTCGAGGAACAAATGGAACATCTAATGGGATTGTTCCCATGCTGCGTGTTTTCAATGATACTGCACGTTATGTTGATCAAGGCGGAGGCAAGAGAAAAGGTGCATTTGCTATATACTTGGAGCCTTGGCATGCTGATATTTTTGAGTTCCTTGATTTAAGAAAGAACCATGGAAAGGAGGAGAATCGTGCAAGAGATCTTTTCTATGCGCTCTGGATTCCAGATCTGTTCATGGAAAGGGTGCAAAATAATGAAAACTGGTCATTGTTTTGTCCCAATGAAGCTCCAGGTTTGGCTGACTGTTGGGGAGATGAGTTTCAGAATCTGTACAAGAAATATGAAAGAGAGGGCAAGGCAAAGAAAGTTGTTTCAGCACAGGCGCTCTGGTTTGACATTTTGAAGGCACAGATAGAAACTGGAACACCATATATGCTTTATAAGGCTCAGCAATTGAACAAGGATATTTTTGAGACTATTTATTATCATGCCTTGAAAGCTTCTGCTGAAATTGCTGCAAAAGAAGGTCCTTATGAAACTTATAGCGGGAGCCCTGTCAGCAAGGGCATTCTTCAACCTGATATGTGGAATGTAGTTCCATCTGATAGATGGAATTGGTCAGATTTAAGGGAGATGATTTCCAAAGTTGGAGTTAGGAACTCTCTTCTTATTGCTCCAATGCCTACCGCTTCTACTAGTCAAATTCTTGGCAACAACGAATGCTTTGAACCATACACCTCAAACATATACAGTCGGAGAGTTTTAAGTGGCGAGTTTGTTGTAGTAAACAAGCATCTTCTCCATGATTTGACTGAGATGGGTATTTGGTCCCCTGTTCTGAAAAACAAGATTGTCTATGAAGATGGTTCTGTTCAAAAGATCTCTGAGATCCCAGATGATCTGAAAGCAATTTACAGAACCGTGTGGGAAATCAAGCAGAAAACTATTGTTGACATGGCCATCGATCGTGGTTGTTATATCGATCAGAGCCAAAGTCTTAATATCCACATGGACCAACCGAACTTTGGGAAGCTAACTTCCCTGCACTTCCACGCTTGGTCCAAGGGCCTGAAAACTGGAATGTATTATCTAAGAACACGCGCTGCTGCCGATGCAATCAAATTCACAGTGGACACTACTCTCCTCAAGGATAAGCAGCATAATGCAGAGGAAGAGGATGTCCAGTCTAAAATGGCAGAGGTGGTGTGTTCCTTGAACAACCGGGACGAATGCTTGGCATGTGGTAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MYVVKRDGRQEAVHFDKITARLKRLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLGELAAETAAAMTASHPDYASLAARIAISNLHKTTMKSFSETIKVMYMHYDERSGLLAPLIADDVYEIIMKNTTRLDSEIIYDRDFDYDYFGFKTLERSYLLKVVGKVVERPQHMLMRVSIGIHKDDIESAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLSECATISKCAGGIGLSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLRKNHGKEENRARDLFYALWIPDLFMERVQNNENWSLFCPNEAPGLADCWGDEFQNLYKKYEREGKAKKVVSAQALWFDILKAQIETGTPYMLYKAQQLNKDIFETIYYHALKASAEIAAKEGPYETYSGSPVSKGILQPDMWNVVPSDRWNWSDLREMISKVGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGIWSPVLKNKIVYEDGSVQKISEIPDDLKAIYRTVWEIKQKTIVDMAIDRGCYIDQSQSLNIHMDQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKDKQHNAEEEDVQSKMAEVVCSLNNRDECLACGS</aaseq>

Gene Sequence

<dnaseqindica>1..228#329..390#480..567#1112..1375#1453..1693#1779..1855#1944..2114#2191..2283#3007..3126#3352..3554#3655..3804#3887..4034#4154..4237#4315..4416#ATGTACGTGGTGAAGCGCGATGGGCGGCAGGAGGCGGTCCACTTCGACAAGATCACCGCGCGGCTCAAGAGGCTCAGCTACGGCCTCAGCCAGGAGCACTGCGATCCGGTCCTCGTCGCGCAGAAGGTCTGCGCCGGCGTCTACAAGGGCGTCACCACCAGCCAGCTCGGCGAGCTCGCGGCGGAGACCGCCGCCGCCATGACCGCCTCCCACCCCGACTACGCCTCGGTAAGGCCCTCCGCGACTGATCCGTACGCTACACGCGGTCGTCTGGGGCGATCCGATGGTTATTGACTGGATGTGGCGCTGATTGATTTACACTGTGAAGCTCGCCGCGAGGATCGCGATCTCGAACCTGCACAAGACCACCATGAAGTCTTTCTCAGAGACGTACGTTCTGATCCCTTTTTTCTTATTTGCTGGTATAGAAATGTTGATGATCTGTGTTGTGAAGTGGTTACGTTGATCTCTGCATGCAGGATAAAGGTCATGTACATGCATTACGATGAGCGATCTGGGCTGTTGGCTCCTCTGATTGCCGATGACGTCTATGAGATCATCATGAAGGTGAGATACATTCTTATCAAAATCAGTTTGGAAGTTCCTTAACATTTTTACAGCATGTGTGCTTCTGCAATATGGCATGCATGAAGATTGCAATTAACATTTGTGACGATGACCGCCTCGCAAATTGTTAACTGTTTATTTGTTTTCTTATGATATTATTACCCCAAAAAGATTGTTTCCGAATCATGTATTGCTGCAATATGTCACTTTCTATAGAATCGCACCAATAGGTTGTTCTTCAACATTTATTTACTAACATTTTATTCACGTGTATTGCCGTGACTCTTTGTTTACTTCTGTTCTTTTGGATCCATTATGATGCTTATGTTGCCCGTCATTTGGTTTGAAATTCATATTTGATGATCTGATATTTGTTTAGCTTTATTGGCTTTGTTGGAGTTCTTGAAATTTTCTTATATCAATGCTGCTTTTTTGCGTTGTTCAATTTCTTGTGTGGATATATTTCTTCAGGTGCTTCAATTTTTTATTATATGTATATTGTGCCAATGTGACTTGATAATTTCTATATGATGCACCATTTCAGAATACCACCCGCTTGGACAGTGAGATAATTTATGACAGAGATTTTGACTATGACTACTTTGGTTTTAAGACCCTTGAGAGATCTTATCTGTTAAAAGTTGTTGGGAAGGTTGTGGAAAGACCACAGCATATGCTAATGAGAGTTTCTATTGGGATACACAAGGATGATATTGAATCTGCTATCAAAACGTACCACATGATGTCTCAGCGCTGGTTTACTCATGCTTCGCCAACCCTTTTCAATGCTGGCACTCCAAGGCCTCAAGTAATATGCTTCCTACCATTGAAGTCCAATTTGGATTATTAAAAATGGTCTCTTATGCTCCTCTCTGTTTTATGCAGTTAAGTAGCTGCTTCCTCATCTGCATGAAAGATGATAGCATTGAGGGAATTTATGATACTCTCTCAGAATGTGCTACCATAAGCAAATGTGCTGGTGGAATTGGTCTCTCAATTCACAATATTAGAGCTACTGGGAGTTACATTCGAGGAACAAATGGAACATCTAATGGGATTGTTCCCATGCTGCGTGTTTTCAATGATACTGCACGTTATGTTGATCAAGGCGGAGGCAAGAGAAAAGGTAAATACCATCAGTTAGTTAGACATGGACCTAATTTACATGTTCAGTGTTCAGGATTTCTTATGGATTCCTAACATTAATTTAGGTGCATTTGCTATATACTTGGAGCCTTGGCATGCTGATATTTTTGAGTTCCTTGATTTAAGAAAGAACCATGGAAAGGTAAAGGCTGTTGAAAGGATGCATTTTCTGATAGACATTAGAAATTGATAACACAGAAACACATTTACTCACCATGTGCAATTCGCAGGAGGAGAATCGTGCAAGAGATCTTTTCTATGCGCTCTGGATTCCAGATCTGTTCATGGAAAGGGTGCAAAATAATGAAAACTGGTCATTGTTTTGTCCCAATGAAGCTCCAGGTTTGGCTGACTGTTGGGGAGATGAGTTTCAGAATCTGTACAAGAAATATGAAAGAGAGGTAAGATGTGTGCTGGGTGTGCAGTTTATTGAAGTAATATCTAAAGAATATTTGTTAACCTAGCATGCAATTTCAGGGCAAGGCAAAGAAAGTTGTTTCAGCACAGGCGCTCTGGTTTGACATTTTGAAGGCACAGATAGAAACTGGAACACCATATATGCTTTATAAGGTGTGCAATTCATAAAGGGAACAGTAGTTTGCCTACAATTCTGTTGCCACATATGCTTATTTCTGAAATCTGGTCTGCAGGATTCTTGTAATAGAAAAAGTAACCAACAAAACCTGGGGACAATTAAGTCTTCAAACTTGTGCACGGAGATTATTGAGTTCACAAGTCCCACTGAAACTGCTGTGTGCAATCTAGCATCGATTGGTTTACCGCGTTTTGTAAGGGAAAAGGTATGCACTATGCAGTACTGGCTGTATAATTTTTGATTTGTTGTAGGTTGAAATTTCTGTATCTCACGACACAAATTTGTTCAGGGTGTTCCTATGGAGTCTCATCCGGCTAAGCTTGTTGGTAGTAATGGATCCAAAAACCGATATTTTGACTTTGATAAATTAGCTGAGGTTTGTGTTTAATATTTACTTACTTTATGCCTCTTCCCCACTAGCCTGAATGCTACTAATATTTGTTGGTTATTGCAGATTACTTCAATTGTCACAAGGAATCTCAATAAAATAATTGATACTAATTATTACCCTGTTGAGACTGCAAAGAGATCAAATATGAGGCACAGGCCAATCGGAATCGGTGTTCAGGGCTTGGCAGACACCTTCATTTTACTTGGCATGCCATTTGATTCAACAGAGGTAAATTTTTCCAACCTAAAAATGTGGTTATTCCAATCTATATATACTTCGCTGAAATGCGATGCAATGATCTTTTCAGGCTCAGCAATTGAACAAGGATATTTTTGAGACTATTTATTATCATGCCTTGAAAGCTTCTGCTGAAATTGCTGCAAAAGAAGGTCCTTATGAAACTTATAGCGGGAGCCCTGTCAGCAAGGTTAGTGCCTGATGTCCAATAACTTTCCCAGCATTTATGTTGCAGGTGCCAATCCGGCCAAGAAAAATGCTGCCTGTATGATTTGCTATTCTTTCTCAAGTAGTTTTAAGTAAGATATTGAAACTCTTAGGGCTTTTGAATTGAAATGTCATTTTGTTATTTGATATCTGGGTTGCAATAGCCAATACTATGTTCTAAGGCTGTACTCAATGCATCTCCTACCAGGGCATTCTTCAACCTGATATGTGGAATGTAGTTCCATCTGATAGATGGAATTGGTCAGATTTAAGGGAGATGATTTCCAAAGTTGGAGTTAGGAACTCTCTTCTTATTGCTCCAATGCCTACCGCTTCTACTAGTCAAATTCTTGGCAACAACGAATGCTTTGAACCATACACCTCAAACATATACAGTCGGAGAGTTTTAAGGTCTGCAAATCTGCTCCTTGTTAAACGTTCAACCGTTGTTTTGGTTACATGAATTTTCGCCAGTCTGTTTTGGTTTACATGACTAGTTTCCTTTTGGCAGTGGCGAGTTTGTTGTAGTAAACAAGCATCTTCTCCATGATTTGACTGAGATGGGTATTTGGTCCCCTGTTCTGAAAAACAAGATTGTCTATGAAGATGGTTCTGTTCAAAAGATCTCTGAGATCCCAGATGATCTGAAAGCAATTTACAGGTTTGTGAATTATCATGTCAGCTATAGTCTCATAAGATGCCAACTATCACTTGTGTCTAAATGTATCCTGTCATTGAATCAGAACCGTGTGGGAAATCAAGCAGAAAACTATTGTTGACATGGCCATCGATCGTGGTTGTTATATCGATCAGAGCCAAAGTCTTAATATCCACATGGACCAACCGAACTTTGGGAAGCTAACTTCCCTGCACTTCCACGCTTGGTCCAAGGTAAAATTTTTAGTTTCAGTTCATGTTCAATTTATAATTCTGCATCAAGTTCTTCTACGGTTCACGTTTTTGCAGCTATCTTGAATAGTATATGCATGAACTAAATTGTTTGATGCCAGGGCCTGAAAACTGGAATGTATTATCTAAGAACACGCGCTGCTGCCGATGCAATCAAATTCACAGTGGACACTACTCTCCTCAAGGTGATTCGACAACTATATACAGATTTTGCATCATATTTTACACATGATTCTTACCCTGAGAAACGCTGCATGTGCAGGATAAGCAGCATAATGCAGAGGAAGAGGATGTCCAGTCTAAAATGGCAGAGGTGGTGTGTTCCTTGAACAACCGGGACGAATGCTTGGCATGTGGTAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009236

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA009236&oldid=62788"