BGIOSGA009240

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Revision as of 03:28, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009240| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009240, complete gene.| tag = OJ1548_...")
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Gene Name

BGIOSGA009240

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009240, complete gene.

LocusTag

OJ1548_F12.27-1

Ensembl Transcript ID

BGIOSGA009240-TA

Ensembl Protein ID

BGIOSGA009240-PA

Length

5426

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36456179..36461604

Sequence Coding Region

36456179..36456317,36456716..36457112,36461325..36461604

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36456179..36461604 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36456179..36461604 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGCCGCCGGCGATAAGCTTGGCTCGCTCTCCGACGTCGTCCGCCTCCGCTTCTCCTCTCTACCCCGTCCGCCGATCCGCCGCAGTCGCCGTCCGGCACCACCGCTGCCCGTCCTTCGCCGCCAAACCCGCTGCAGGAGTTTGCTGTGCCAGCCCGGCGGTTGAATTGTTGCCATCTTTGAGCCCAGACATCCTGGTTCGAGATGCGCGGCTAGAGGATTGCTGGGAAGTAGCTGATACTCATTGCAGCTCTTTCTTTCCAGATTACACTTTTCCACTGGACCTTGTTCTACGTATTGATCGTTACATTGCCCTCCTATCCGGTTTTTCGGTTCCACCTGGCTGCATGAGAACTTGCCTTGTCGCCGTTAACAGTAATTCGCTTAGTAGAAGTATCAGCATTGAATGTGGAGATTTAAGAGATGCTGACTTCCAAGAAAAACACGGTCTCAGTAAGGCCTCCATAGCTGGCATTCTTACAGTAGACACGGTGGCAGACTATCTTCCCAGAAGAGGGCCTCTCAAGCAGAGAAGAACAGGTATTGCATATATAGCAAATGTTGCAGTCCGAAAGGAAGAACGTCGTAAAGGAATCGCTAAAATGCTTGTTGCAGAAGCAGAGGAGCGAGCAAAGAGTTGGGGTTGCCGATCCATGGCATTACATTGTGATGTAAACAACATTGCTGCGCTGCGTCTGTACAAAAATCTAGGATACAAATGCATCCGTGTACCAGAAGATGCTAAGTGGCCAGAACCTAAGATAGCAAAAGGAGTGCGATACAACTTTATGATGAAGCTAGTACCCAAGATGTAG</cdnaseq>

Protein Sequence

<aaseq>MMPPAISLARSPTSSASASPLYPVRRSAAVAVRHHRCPSFAAKPAAGVCCASPAVELLPSLSPDILVRDARLEDCWEVADTHCSSFFPDYTFPLDLVLRIDRYIALLSGFSVPPGCMRTCLVAVNSNSLSRSISIECGDLRDADFQEKHGLSKASIAGILTVDTVADYLPRRGPLKQRRTGIAYIANVAVRKEERRKGIAKMLVAEAEERAKSWGCRSMALHCDVNNIAALRLYKNLGYKCIRVPEDAKWPEPKIAKGVRYNFMMKLVPKM</aaseq>

Gene Sequence

<dnaseqindica>1..139#538..934#5147..5426#ATGATGCCGCCGGCGATAAGCTTGGCTCGCTCTCCGACGTCGTCCGCCTCCGCTTCTCCTCTCTACCCCGTCCGCCGATCCGCCGCAGTCGCCGTCCGGCACCACCGCTGCCCGTCCTTCGCCGCCAAACCCGCTGCAGGTCTTATCTACCGCTCCAATTTTCTTGGCATTGATAAGTAATTGAGGTTATAATCGTAATCCTCTTTACAATTGGGTAGTATTGGATTATCCGGGGAAGATTAATTTGACAGCACGCAATCGGTTTGGTTCTCCCCAAAGGATGGGAGTGTCGTTTAGCAAATCGACTGAATTAGTATTTGGTGAATACCTTGCTCCAACTGGGGCATTTGGCTTAGAGTGTTGTCATTAGAAAGGGTACCATGCTACCTCAAAATGAATATATCGTGATAATTTGAACTTATTACACTAAACATTCAGTGTTTTATATGTTGGTCTTGTATGAGCTAACTGTAAATTTATCTGGGTTTATTTCACATGGTTGGCATGTGCCCATGAGAATGTCTACTTTGTTTTCAGGAGTTTGCTGTGCCAGCCCGGCGGTTGAATTGTTGCCATCTTTGAGCCCAGACATCCTGGTTCGAGATGCGCGGCTAGAGGATTGCTGGGAAGTAGCTGATACTCATTGCAGCTCTTTCTTTCCAGATTACACTTTTCCACTGGACCTTGTTCTACGTATTGATCGTTACATTGCCCTCCTATCCGGTTTTTCGGTTCCACCTGGCTGCATGAGAACTTGCCTTGTCGCCGTTAACAGTAATTCGCTTAGTAGAAGTATCAGCATTGAATGTGGAGATTTAAGAGATGCTGACTTCCAAGAAAAACACGGTCTCAGTAAGGCCTCCATAGCTGGCATTCTTACAGTAGACACGGTGGCAGACTATCTTCCCAGAAGAGGGCCTCTCAAGCAGAGAAGGTATACCTTTATTTTCTTCAAACACCTTATAAGATTGCTAACACATATACACATATGCAACTGCAAGATATAAATGGTTTGCTTATTCTTTGCACCTTAAATGCATTCACTCACTTTGCCAAAGCCTGTTTACCATATCCATTCTACTTATGGTGTTGTTTCCTTTTTGTCCTGACATTGATGTTCCTTTTTTTTTTGGTATCCCTCAGCCAAGTAATTATTCGTCCCATTACATTTGAAGCTTACTTTATTGGCTTGGGAATTTCTAACAGTTCATACCAAGCTACAAAAAATTGATAATTTGTTGTAATGCCTTTCCATCTCTGAAGGATATGTGCTAGTCAATAACAGATTAACACAGGTCATATTAAAAAAACATGCTAGTTAATAACTTAAATTTATTGTGCAATTGGAGCCTTGAAGACTACACTTGACTATGCAATGCCATAAAAACAATAACATATTATTTTATACTAATTGCATAAATGGGGGAACACCTGAGTTCCCATTTTTCAATTCATATACATTTTGCTAAATATGAGGTGCATGCAAAACTCAAATGCCAAATATGTTTTGTCTTAAACTACTTGTGTCTAGAACAGTGATAAATTATGATATGATTCCTTCCCATAAAATGGGGAGAGAGTATTTAAGTATACAAAAGTAATGGTTCCCTTCTCTCATAACAGACAAGTGTTTCTTGCATGATAATAATTACTAAAGGAAAGCGTTTCTCTTTACCATTGGAGTCGGGAATAGAATTTCTGAACTATGCCACTGTTGACAGAAAACATGTGGCCTGGGAGGTCTGCTTAACTCCAGTGCAGGTCCAAAGCTCGCCTTCGGATGTGTTAGCGTGCCAGTTGATTTGATCCTGTAATCAACAAGAAATAGAAGCAAAGAAGCCGTGGTTAAATCTATAAATGATAGCCAATCGGCTAGATGCCGATGACATATCATTTATCTTTGAGCCGATGTCATTTGTGTATCGATCGGCGGTCATGAATAAGTAAAAAAGAACTAAATCTACTCGATCGGCTGTAGATATTAATGATATATACTCCTTATATCGATGTATACTTAAATCAAGTGATTGGGATAGATCGGTCATCATGCCGAGACAGTATAAATCACTTAGATCGAAATATATATCAATAACAGGACTATATATGTTTATAGCATAGCCGATCAGATAAATCTAGCATGTATCAGCTAATACTCCGATACTACTCCATACCAGGATATTAAAGCAAGAATAATGTATCAAACAAAGGCCTAACATATTTAGATACAGCAATATCTTGATATAAAGGGCAGATTTAACATATCACTGAGGCATATAGAATAAATATAGTTAAATCAGATACGATCAGCTGAAACTCCGATGCTATTCTAATCGGCAACTAGAAGGCAGGCTAGAGATCGATATTCTAAGCACGATTTAATAGATCAAACTCAACTGATGCAGCATTAAGTATGAAAAGAAGAACGATATCTAGACAATCAAGCCGCTAGAAGTTTCATAGAATGGTAGATATCTCATATAATCTAGATCAACATCAATATTTAACCTAATCGGCTACCCTCTATTAACAGATGTTAACCGATGGCAGGTTAGATGATGATATTGCTAGAGATTATGTAAGACATATGATAACTCGACGAATTACATAAACGGGATTAGAGTATCATAAAGATGGAAGCACTAATCCTAAGAACGCAATCCGTCATAACGAATTTTACCTCTTGTTGAAGATCGAAATCGATGCAGCTCAACCCGAAAGCAAGAACTCGTCGAAACAAAACTAAAGCAAAAAGGGTAGCGATACGCCGAGATTGTATTGAACGTGTGTTGTTAAATTACATAGGGCTCGGGGTCTATTTATGCCCGAGAATTACAAGATATGCCCATACCGGACACGACTATTATCTCTAACAAACTCTTAAGATACCATAAGTCTTTGTGGCAGACTTTTGCCTATATTTATCTATAAGGAATTTACATAAGATATCCTAATTAATAGATACAATTGCCTTCCCAGGACTCTATCCGTGCGTAGCAATCATCTTGAAGTACATTAACTTGAACCCGATGTCGTGTACAAGTCATATTGTCGGAATCGGCTGTACCGGCTTACTTAGCCCGACTCAGACCTAGCCGATCCTAACCGTAGCCGATCTGGACTCCGGCCGATTCCTGCTCTGTTTCCGAACTCGATCTCCGCTTCCGACTTCGCTTTGATCCAATCTTCTTTCCTGACACCGATGTTACCAAATTTGGTTGTTAACAGCCACCTAAGCCTTGTTGCACTTATATTTCGTTGGAATTTCTGAAATACAGAAAGAACTATTAAATTAGAAAGAGTGAAACTCCACTAGCAGCATGCATAGTAAATCTGCATAGGACCCGGCAACTCAATCGTCATATAAAACCTTTTTGTTGCAACAAATTTCCTATCCGTGGCATCTTAATTTTCTCCCAAGCTTTGCACATAGCAGTATCATCTTTTTGGTTTTCACCATCCTCAGTCTTTTGATCACTGGTGCCAAGATGTAATATAAGTCTTAAGCACAATTGGTTTGAATCAATCAAAACTAAGAAAACTACAATCTTGGGCATAATACATAAAATGTTGTGCTCCATTTTTTCTCCAGGAATGCATAGTTAACTTAATGCTAGGTTTTAATTTATCATGATCTGTACCTCATCGCATTGAATTTTACCATCACATGTTTTTTCTCTATACTGTTTATCCTTTTTGTAACTACCATAGTCCATGTCATTCTCACCTTGTAAGTTTCTAAAGAAAAAAGCTATATATTGTCCTGATGCTTCGACATGAGTTGCTTCAGCTCCCGTTTATGGTTATAACTTGTATGTGCCCCCATACCCTTTTCTGTTTGCTGTCCTTCCTTTTTGTTCTTTGACTAAGATCCAAAGGGAGATACAGTTATCTACAGCTAGACAAACACAACTTCATGCGCACTCTCTTTTGCTGTATTGACTGTCCACCGTGGGCACCATTTGTTGCCTTGGAATTTATTTGGAGATGTCTCTTTCCTTTCCTTGGGTGACTCTCACCTAGCTTTACTTGTACAAGATGAAAGAACTGTGTGAAACAAGAGGGCTCAGCCTACCTACAGAATTTTGAAGAAAATGCAATAAATATCATGAATTTCTTGTTCATTGTTGACTATTTCAAGAAAATATTTGTAAACAGTGAGCAAATTTGAATTTCAACTTGATTGGAATCATAGAGGAAAAACATGTGTTTTATTATATTTTTTGGAGAAATACATTTAAATGCAGTGCAACTTGCCTGGGTTAAAATGAACATCCAGTTCAATCAACGAAGTCTATCATAGTTAGGGATTAAACCGTCTTGTTGAATTAGGATAGAACGCGCATTGTATTTGTGCCACAGCCTTCTTTTTTTTTCGCCGGGTTGGCCGAAGGAATGGCTGACCAAATTTCATTAAGATTGGAAGAAAACAAATTACAAACATACAAGGGTACATCGACAAGAAGTTGTCGAACGTGTTGTGAGGCAAAACCTTACCCCACGAGAAAGGGAAAATAAAAAGCCCTAAGGCTGAAAAACAGTTCTACTTCTCACAATGTGAAAAGAGACCTGCAGACTTCCAGATGATTATTTCCTCTTCGATATCCTCAACCAACTGAGCAGGGTTTTTGTCTCTTTGTTCGAATACTCTTGCGTTTCTTTCCTTCCAAATTAGCCAACAGATCATCATGAAAACACTGCCAAAAAGGCTGCCCTGTGTGGCCTTTAATCTCACCAGATGTGAAATGTCATATACAAGATAACATAAAAGGATATTCTCTGAGTTCGTTTCTTGTGGCAGTTTTCTAATATTTATTGCACTGCATTATAGAGCATGGCACCTCTTATGACATCCATCTCAACACTGCCACAACCTCTTCTAACACCTTATGCGGTCTAAATGAAGCTGCAGCACTGTGGCATGTATGGAATAAGTTGTTTTTGGTTGGATACAAAGTCAACAAAAACATTGGTTGTGCTATTCTTTTGCACTGATGAAATGCTCAGATATGTGAAGCCTTGTTTTCATTTGCCTCACTCTGTATAAACTGTAGAAGATTGTCCATTATTATATTTTTGGAGGGTTAATATAACACACGAGCTAGTACTTTGCCGCCTGACATCATCCAGATTTGTTTGAAACATGCAGAACAGGTATTGCATATATAGCAAATGTTGCAGTCCGAAAGGAAGAACGTCGTAAAGGAATCGCTAAAATGCTTGTTGCAGAAGCAGAGGAGCGAGCAAAGAGTTGGGGTTGCCGATCCATGGCATTACATTGTGATGTAAACAACATTGCTGCGCTGCGTCTGTACAAAAATCTAGGATACAAATGCATCCGTGTACCAGAAGATGCTAAGTGGCCAGAACCTAAGATAGCAAAAGGAGTGCGATACAACTTTATGATGAAGCTAGTACCCAAGATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009240