Os12g0606000

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Revision as of 10:36, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0606000| Description = Protein of unknown function DUF26 domain containing protein| Version = NM_001073760.2 GI:297613497 GeneID:4352743| L...")
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Gene Name

Os12g0606000

Description

Protein of unknown function DUF26 domain containing protein

Version

NM_001073760.2 GI:297613497 GeneID:4352743

Length

4404 bp

Definition

Oryza sativa Japonica Group Os12g0606000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:25819057..25823460

Sequence Coding Region

25819057..25819507,25819814..25820092,25821468..25823389,25823419..25823460

Expression

GEO Profiles:Os12g0606000

Genome Context

<gbrowseImage1> name=NC_008405:25819057..25823460 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:25819057..25823460 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcgtcggcgccaccaccagctgctcgccgtgctcctcgccgccgccgccgccgtggtcgccgccgccggtgcccaagaggtaccctacgcgccgatttcgaacacaggcgggtgctcgtcgtggaacaacttcagcgtcggcagcgggtaccaggttaacctcttcaagctcctcggcaacctcgccgcgggcggcgccgccgccggcagcggcggcttctacagcggcagctacggcgccctctccgacatggtgttcggcgtcgccatgtgctacgtcgaccggcactggaccaagtgccggaggtgcctggacgcggcgacctccggcgccgccgccttctgcccgtacagccggagggtggacgtcatgtacgacgagtgcgtgctccgctactccgacgagatcaacctcttctccttcgccgactccagcgggtggtacggtgttcaccgggctcgcggcggaggtgacggcggcgtcgccgccaagaagcaggagtacacggactcgcgaggcgagtcgctgacggtgtacgggatggtgcagtgcggccgcgggttgctgccggaggagtgcagcaagtgcctgaggcaccagctgggagagctcaccacagggctccccaacaacaccgctggtatcatcaggggttacagctgctacagcagatatgacatggcttccttcccaatccaaatcaccagccagtcttctccccaagaagcagacggtgcctcggccggttcccaatggaggctatacattcggcgacaagtgctcgccggcgtggctgccggctccgccgcgatcttcctttgcctgagtctttcagtctgctacattcttcaccggcgccggcgggacagcaagatcaggccggtcaagctaccttcctcctcccgtgatgaatccgtggaacccgacctcgagcacggcggcgggccgcggcgcttctcctacggcgagctcgccgccgccaccaacgacttctccgacgacaggaagctcggagaaggtggcttcggctccgtctaccgtgggttcttggagggtctgaaccttcacgtcgccgtcaagaggatctcccggagctcccagcaaggttggaaggagttcgtctccgaggtcaagatcatcagccgcctccgccaccgcaacctcgtgctgctcatcggctggtgccatgaacccgccgcctccgccgccggaggcgacggcgatggcgacggcggcggcgacaaactcttgcttgtctacgagctgatgtgcaacggcagcgtggagagccacctgtacaaccgggacacgctgctgccatggccggccaggtacgagatcgtgctcggcatcggctcggcgctgctgtacctgcaccaggagacggagcagcgcgtcgtccaccgcgacatcaagcccagcaacgtcatgctcgacgcctcgttcaacgccaagctcggcgacttcggcctcgcgaggctcatcggcgaccggaggacgccgtcgcagacgacggcgacgccgacgacgcggctggcggggacgatggggtacatggacccggagtgcatggtgaccggcagggccagcgtggagtcggacgtgtacagcttcggcgtcgcgctcctcgagctcgcctgcggcaggtgcccggtcatgacgcggccggacgggagcgccgtgcacctggcgcagcgggtgcgggagctgcacgacgccgggagggtcaccgccgccgccgacggacggctgaacggagggttcgacggcgacgagatggagcgcgtgctggtggtcaggctgtggtgcgcgcaccccgaccgcggcatgaggccggccatcaggcaggccgtcaacgtgctgcggttcgacgcaccgctgccgagcctcccgcccccggcgaagatgccgccgccgcctggagcgccgtcccattcgcgcttgccgctgctcgccgcagacctgttcccctccctgactcgcccgccgccggccggagccacgcacgctgccgctcgcccagccgctcccgtcaacgctaacagcacacacatagaggatgggagggcgccttccgcctcccatcttgaggatggcaactcgatcaatcgatccgtgtgtacgcgacgcgatgctttcaaagcagttgtaatcaacgtatgtcgtcatgcgcccgccgcgacggggaagccgatgccgcggcacgtcgacgggaacatggcgaagaggaagctccccgccgcgccggccgccatgggcaccgccgcgagcagctgcctcgtcgccggcgcccggcgactccaccgggtagaagcacgccaccgcgttgcagtccaccatggccacgcccaggaacaccgcgaacgacagcgcgccgagcctgtacctgttgtccctcggcggcggcgagccggagccgtcgatgaggcggaggcggctgctgggcgtgacgaagtcgtagcgcacggcgcccgtgccgtcgcggtagctgtcggtgaaggagagcaggaagcagcagagtgcataggcgccgacgaggcaggcgatgagcgcacggttggtggccgtgtagctgtcgtccgcggtggaggacggcgagagcacctcgaaggcgagcacggcgccggtcgggaggtgctttgcgagacgaggctcggcgtcgcctgtgccggcggttgcgtcgtctag</cdnaseq>

Protein Sequence

<aaseq>MARRRHHQLLAVLLAAAAAVVAAAGAQEVPYAPISNTGGCSSWN NFSVGSGYQVNLFKLLGNLAAGGAAAGSGGFYSGSYGALSDMVFGVAMCYVDRHWTKC RRCLDAATSGAAAFCPYSRRVDVMYDECVLRYSDEINLFSFADSSGWYGVHRARGGGD GGVAAKKQEYTDSRGESLTVYGMVQCGRGLLPEECSKCLRHQLGELTTGLPNNTAGII RGYSCYSRYDMASFPIQITSQSSPQEADGASAGSQWRLYIRRQVLAGVAAGSAAIFLC LSLSVCYILHRRRRDSKIRPVKLPSSSRDESVEPDLEHGGGPRRFSYGELAAATNDFS DDRKLGEGGFGSVYRGFLEGLNLHVAVKRISRSSQQGWKEFVSEVKIISRLRHRNLVL LIGWCHEPAASAAGGDGDGDGGGDKLLLVYELMCNGSVESHLYNRDTLLPWPARYEIV LGIGSALLYLHQETEQRVVHRDIKPSNVMLDASFNAKLGDFGLARLIGDRRTPSQTTA TPTTRLAGTMGYMDPECMVTGRASVESDVYSFGVALLELACGRCPVMTRPDGSAVHLA QRVRELHDAGRVTAAADGRLNGGFDGDEMERVLVVRLWCAHPDRGMRPAIRQAVNVLR FDAPLPSLPPPAKMPPPPGAPSHSRLPLLAADLFPSLTRPPPAGATHAAARPAAPVNA NSTHIEDGRAPSASHLEDGNSINRSVCTRRDAFKAVVINVCRHAPAATGKPMPRHVDG NMAKRKLPAAPAAMGTAASSCLVAGARRLHRVEARHRVAVHHGHAQEHRERQRAEPVP VVPRRRRAGAVDEAEAAAGRDEVVAHGARAVAVAVGEGEQEAAECIGADEAGDERTVG GRVAVVRGGGRREHLEGEHGAGREVLCETRLGVACAGGCVV</aaseq>

Gene Sequence

<dnaseqindica>1..451#758..1036#2412..4333#4363..4404#atggctcgtcggcgccaccaccagctgctcgccgtgctcctcgccgccgccgccgccgtggtcgccgccgccggtgcccaagaggtaccctacgcgccgatttcgaacacaggcgggtgctcgtcgtggaacaacttcagcgtcggcagcgggtaccaggttaacctcttcaagctcctcggcaacctcgccgcgggcggcgccgccgccggcagcggcggcttctacagcggcagctacggcgccctctccgacatggtgttcggcgtcgccatgtgctacgtcgaccggcactggaccaagtgccggaggtgcctggacgcggcgacctccggcgccgccgccttctgcccgtacagccggagggtggacgtcatgtacgacgagtgcgtgctccgctactccgacgagatcaacctcttctccttcgccgactccagcgggtggtacggtgagtcgtgatccaaatttatttgcacataataaaggtcaacttctggatcattatccttttagagtttccccatcttatatatatatatacttctcgtaaaccgccgctaaacgttgtaaccttatcatgatatagtgaagatattttgctagctggcgtctatggtggttttttctctcctgctttagaagggttttccacgttaaatgtcgtgtcttttgtgattaatcttttttatcgtttgtgtcgtgggagaacgtctacgtcgacgacatggcgagcatgaacgcgacgcggtgggaggtgttcaccgggctcgcggcggaggtgacggcggcgtcgccgccaagaagcaggagtacacggactcgcgaggcgagtcgctgacggtgtacgggatggtgcagtgcggccgcgggttgctgccggaggagtgcagcaagtgcctgaggcaccagctgggagagctcaccacagggctccccaacaacaccgctggtatcatcaggggttacagctgctacagcagatatgacatggcttccttcccaatccaaatcaccagccagtcttctccccaaggtattttcctttattttacctgatatacctacctactactcccacattttgtttgtttgttcactcaaatttatttaagtttgatcaagtttataggaaaacgtaacggcgcatcagtagtactaaattagtttatgttggtatatcaaatcgtgccgtcacacctgatcacgttatgtgtaacctgtaactacacccgaggacatgacgttgacgtgggagaacggggcgagtatagatagccaaatgggccgcccccggcacaacccaggcacaatcgagcctgggccgagatcagtcgggccaacacgtcgggccgggtcgcgcctacccacgggctgcacgcacagcacaataagtcttgggcgtgctgggtcgcccgaaggcatgaaagtccatcgtgcttcttcatagaataaatgtctatgtttagtttgttgccaaatttggtcaagggaccacctatacatttggcgataaattttctcctaaaaatttgatagatataactatagtacaatcgtagtgtaattacactgtaacttatatgtaattacactgtaacttgcatgtaactacagtgtaacttgtatataagtttcatgtaattttgaatcgttaaatctattacaagatttgtttttgtgaggaagaaaaaaatcacagcacacacatatgtgtaaggatttgttctcacaacctccattttaccgaaataacatattacaaagagatttttgaaagttacatataagttacactatagttacagtgtaattacatgtaagttacagtgtaattacactacgattgtactgtaattacatctgtcaaatttttgggagaaaatttgtcgataaatatataacaaaatcgtttggtcaatatataataaataatgccaaaattttggcaatattattatcttgctaaaattttggctacaatctgaacagaccctaagtctattttttctccctcatatctttgggctttcttatatagatgaaaataagtctattttagctccctcaactatttttcttggactatgcctgccgggccggcccaccgagccaaggcatcgccccaggcacagctcaactgttgatccgggccggcacgggcccgacattagtcgtgtcgtgccgtgtttgggctaggctaaatggtcatgccgtgcgccggaccgtcaggtatcgggtcttattgccatatataagggcgagcatctttaaagaaaatggtattccctccatactcattttaaattcaaggttttctcatagagagttgtgtacatctccattatttgagttttcaattactatatattattagaaaacctcaattcaatgtagtattctatatgcagaagcagacggtgcctcggccggttcccaatggaggctatacattcggcgacaagtgctcgccggcgtggctgccggctccgccgcgatcttcctttgcctgagtctttcagtctgctacattcttcaccggcgccggcgggacagcaagatcaggccggtcaagctaccttcctcctcccgtgatgaatccgtggaacccgacctcgagcacggcggcgggccgcggcgcttctcctacggcgagctcgccgccgccaccaacgacttctccgacgacaggaagctcggagaaggtggcttcggctccgtctaccgtgggttcttggagggtctgaaccttcacgtcgccgtcaagaggatctcccggagctcccagcaaggttggaaggagttcgtctccgaggtcaagatcatcagccgcctccgccaccgcaacctcgtgctgctcatcggctggtgccatgaacccgccgcctccgccgccggaggcgacggcgatggcgacggcggcggcgacaaactcttgcttgtctacgagctgatgtgcaacggcagcgtggagagccacctgtacaaccgggacacgctgctgccatggccggccaggtacgagatcgtgctcggcatcggctcggcgctgctgtacctgcaccaggagacggagcagcgcgtcgtccaccgcgacatcaagcccagcaacgtcatgctcgacgcctcgttcaacgccaagctcggcgacttcggcctcgcgaggctcatcggcgaccggaggacgccgtcgcagacgacggcgacgccgacgacgcggctggcggggacgatggggtacatggacccggagtgcatggtgaccggcagggccagcgtggagtcggacgtgtacagcttcggcgtcgcgctcctcgagctcgcctgcggcaggtgcccggtcatgacgcggccggacgggagcgccgtgcacctggcgcagcgggtgcgggagctgcacgacgccgggagggtcaccgccgccgccgacggacggctgaacggagggttcgacggcgacgagatggagcgcgtgctggtggtcaggctgtggtgcgcgcaccccgaccgcggcatgaggccggccatcaggcaggccgtcaacgtgctgcggttcgacgcaccgctgccgagcctcccgcccccggcgaagatgccgccgccgcctggagcgccgtcccattcgcgcttgccgctgctcgccgcagacctgttcccctccctgactcgcccgccgccggccggagccacgcacgctgccgctcgcccagccgctcccgtcaacgctaacagcacacacatagaggatgggagggcgccttccgcctcccatcttgaggatggcaactcgatcaatcgatccgtgtgtacgcgacgcgatgctttcaaagcagttgtaatcaacgtatgtcgtcatgcgcccgccgcgacggggaagccgatgccgcggcacgtcgacgggaacatggcgaagaggaagctccccgccgcgccggccgccatgggcaccgccgcgagcagctgcctcgtcgccggcgcccggcgactccaccgggtagaagcacgccaccgcgttgcagtccaccatggccacgcccaggaacaccgcgaacgacagcgcgccgagcctgtacctgttgtccctcggcggcggcgagccggagccgtcgatgaggcggaggcggctgctgggcgtgacgaagtcgtagcgcacggcgcccgtgccgtcgcggtagctgtcggtgaaggagagcaggaagcagcagagtgcataggcgccgacgaggcaggcgatgagcgcacggttggtggccgtgtagctgtcgtccgcggtggaggacggcgagagcacctcgaaggcgagcacggcgccggtcgggaggtgctttgcgaggtcggccgtgctgttcagcgtccttgcagacgaggctcggcgtcgcctgtgccggcggttgcgtcgtctag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0606000, RefSeq:Os12g0606000