BGIOSGA009259

From RiceWiki
Revision as of 03:28, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009259| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009259, complete gene.| tag = OJ1520_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA009259

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009259, complete gene.

LocusTag

OJ1520_C09.26

Ensembl Transcript ID

BGIOSGA009259-TA

Ensembl Protein ID

BGIOSGA009259-PA

Length

1403

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36852788..36854190

Sequence Coding Region

36852788..36852932,36853027..36853181,36853276..36853458,36853556..36853908,36854013..36854190

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36852788..36854190 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36852788..36854190 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCCAATTTTGAGGCCAACAACAACAATGGCGAGAAGCAGCTGGTCTGTGTGACCGGAGCAGGTGGCTTCATTGGGTCGTGGGTGGTGAAGGAGCTCCTCATCCGTGGCTACCACGTCAGGGGAACAGCCAGAGATCCTGCTGACAGCAAGAATGCTCACCTGCTTGAGCTGGAGGGAGCCGAGGAGAGGCTCTCCCTCTGCCGTGCCGACGTCCTCGACGCCGCCAGCCTCCGCGCCGCCTTCAGCGGGTGCCACGGCGTCTTCCATGTCGCCTCCCCGGTGTCCAACGACCCTGACCTGGTTCCGGTTGCAGTGGAGGGGACGAGGAACGTGATCAACGCGGCGGCGGACATGGGCGTGCGCCGCGTAGTGTTCACGTCTTCGTACGGCGCCGTGCACATGAACCCCAACCGTAGCCCCGACGCCGTCCTCGACGAGACCTGCTGGAGCGACTACGAATTCTGCAAGCAAACAGACAACCTGTACTGCTGCGCCAAGATGATGGCGGAGCTGACGGCGACGGAGGAGGCGGCGAAGAGGGGGCTGGAGCTGGCGGTGGTGGTGCCGTCGATGACGATGGGTCCCATGCTGCAGCAGACGCTCAACTTCAGCAGCAACCACGTCGCCCGCTACCTCATGGGCACCAAGAAGTCGTACCCCAACGCCGTCGCCGCCTACGTCGACGTCCGCGACGTCGCCCGCGCGCACGTCCTCGTCTACGAGCGCCCCGACGCACGCGGCCGCTACCTCTGCATCGGCACCGTGCTCCACCGCGCCGAGCTCCTCCGGATGCTCAGGGACCTCTTCCCCCAGTACCCTGCCACTGCAAAGTGTGAGGATGATGGGAAGCCAATGGCGAAGCCGTACAAGTTCTCGAACCAGAGGCTCAAGGATTTGGGGTTGGAATTCACTCCACTGAGGAAGAGTTTGCATGAGGCGGTCTTATGCATGCAGCAGAAGAGTCACCTGCCTCTGATTTATCCCGTTCCAAAACGTGCTTACCTATAA</cdnaseq>

Protein Sequence

<aaseq>MSSNFEANNNNGEKQLVCVTGAGGFIGSWVVKELLIRGYHVRGTARDPADSKNAHLLELEGAEERLSLCRADVLDAASLRAAFSGCHGVFHVASPVSNDPDLVPVAVEGTRNVINAAADMGVRRVVFTSSYGAVHMNPNRSPDAVLDETCWSDYEFCKQTDNLYCCAKMMAELTATEEAAKRGLELAVVVPSMTMGPMLQQTLNFSSNHVARYLMGTKKSYPNAVAAYVDVRDVARAHVLVYERPDARGRYLCIGTVLHRAELLRMLRDLFPQYPATAKCEDDGKPMAKPYKFSNQRLKDLGLEFTPLRKSLHEAVLCMQQKSHLPLIYPVPKRAYL</aaseq>

Gene Sequence

<dnaseqindica>1..145#240..394#489..671#769..1121#1226..1403#ATGTCGTCCAATTTTGAGGCCAACAACAACAATGGCGAGAAGCAGCTGGTCTGTGTGACCGGAGCAGGTGGCTTCATTGGGTCGTGGGTGGTGAAGGAGCTCCTCATCCGTGGCTACCACGTCAGGGGAACAGCCAGAGATCCTGGTAAGTTACTAACTAGTAGTTCACGGTGTTACCATTAATTTGCTGCATTTTGTGCTTGATTTATTGATCGGTTCTTGCACGCGCGTATCTGTAGCTGACAGCAAGAATGCTCACCTGCTTGAGCTGGAGGGAGCCGAGGAGAGGCTCTCCCTCTGCCGTGCCGACGTCCTCGACGCCGCCAGCCTCCGCGCCGCCTTCAGCGGGTGCCACGGCGTCTTCCATGTCGCCTCCCCGGTGTCCAACGACCCTGTAAGTTCACTAGCCTGGTTCTTGAACCCCACAAAAGAAAACAATGCCTTTGTTGAATTCCTCGAACTTTTACTGACGCTGCTCCGTGATGCAGGACCTGGTTCCGGTTGCAGTGGAGGGGACGAGGAACGTGATCAACGCGGCGGCGGACATGGGCGTGCGCCGCGTAGTGTTCACGTCTTCGTACGGCGCCGTGCACATGAACCCCAACCGTAGCCCCGACGCCGTCCTCGACGAGACCTGCTGGAGCGACTACGAATTCTGCAAGCAAACAGACGTAAGCACATTACTCTGCTCCGTTTCTACCAACTCCAACAGCGTTGCTTACATGAACAGTAAATTCATCTCGGCAAATTTTCTCGTCGTACGTGCAGAACCTGTACTGCTGCGCCAAGATGATGGCGGAGCTGACGGCGACGGAGGAGGCGGCGAAGAGGGGGCTGGAGCTGGCGGTGGTGGTGCCGTCGATGACGATGGGTCCCATGCTGCAGCAGACGCTCAACTTCAGCAGCAACCACGTCGCCCGCTACCTCATGGGCACCAAGAAGTCGTACCCCAACGCCGTCGCCGCCTACGTCGACGTCCGCGACGTCGCCCGCGCGCACGTCCTCGTCTACGAGCGCCCCGACGCACGCGGCCGCTACCTCTGCATCGGCACCGTGCTCCACCGCGCCGAGCTCCTCCGGATGCTCAGGGACCTCTTCCCCCAGTACCCTGCCACTGCAAAGTATGCAACTAATAACTACTAATGTGCTTATGTGGATTGCTTAATTGCTCTTCTGAGACGATCGATCTCAAATTCTCATGCGTGTGTTTCTTGGATTTTTTCAGGTGTGAGGATGATGGGAAGCCAATGGCGAAGCCGTACAAGTTCTCGAACCAGAGGCTCAAGGATTTGGGGTTGGAATTCACTCCACTGAGGAAGAGTTTGCATGAGGCGGTCTTATGCATGCAGCAGAAGAGTCACCTGCCTCTGATTTATCCCGTTCCAAAACGTGCTTACCTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009259