BGIOSGA009283

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Revision as of 03:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009283| Description = Japonica Group Os02g0815500 (Os02g0815500) mRNA,| Definition = Oryza sativa Indica Group BGIOSGA009283, complete gene....")
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Gene Name

BGIOSGA009283

Description

Japonica Group Os02g0815500 (Os02g0815500) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA009283, complete gene.

LocusTag

NM_001055038.1

Ensembl Transcript ID

BGIOSGA009283-TA

Ensembl Protein ID

BGIOSGA009283-PA

Length

3453

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37051824..37055276

Sequence Coding Region

37051824..37051863,37052011..37052147,37052779..37052825,37052915..37053240,37053565..37053647
,37053726..37053801,37054424..37054581,37054904..37055065,37055160..37055276

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37051824..37055276 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37051824..37055276 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCCTCGACCCAGGGCCAGGTCATCACCTGCAAAGCGGCGGTGGCATGGGAGGCCAACAAGCCGATGACGATCGAGGACGTGCAGGTGGCGCCGCCGCAGGCCGGCGAGGTCCGTGTCAAGATCCTCTTCACCGCGCTCTGCCACACCGACCACTACACCTGGAGCGGCAAGGATCCTGAGGGTCTATTTCCTTGCATTCTTGGTCATGAAGCTGCTGGAATTGTTGAAAGTGTTGGGGAAGGAGTAACTGAGGTGCAGCCTGGGGACCATGTCATTCCTTGTTACCAAGCAGAATGCAGAGAATGCAAGTTTTGCAAGAGTGGAAAGACCAACCTCTGTGGCAAAGTTCGTGCTGCCACAGGGGTCGGTGTCATGATGAATGATCGCAAGAGCCGTTTCTCAATAAATGGAAAACCCATTTATCATTTCATGGGAACATCTACATTCAGCCAGTATACTGTTGTGCACGATGTCAGTGTCGCAAAGATAAACCCACAGGCACCTCTAGACAAAGTTTGCCTGCTTGGCTGCGGTGTTTCTACTGGCCTCGGAGCAGTATGGAATACCGCAAAGGTTGAAGCAGGTTCCATCGTTGCTATTTTTGGACTTGGCACAGTTGGACTTGCAGTTGCTGAGGGGGCAAAATCAGCTGGTGCTTCTCGGATTATTGGCATCGACATTGATAGCAAAAAGTTTGATGTCGCAAAGAACTTTGGGGTTACAGAATTTGTGAACCCAAAGGACCATGACAAACCAATCCAACAGGTCATAGTTGACCTTACAGACGGTGGTGTGGACTACAGCTTTGAATGCATTGGAAATGTTTCTGTTATGAGGTCTGCATTGGAGTGCTGCCACAAGGGCTGGGGAACCTCTGTCATCGTTGGTGTAGCTGCTTCTGGGCAAGAAATCTCTACACGACCATTCCAGCTCGTCACTGGCCGTGTCTGGAAGGGAACAGCTTTCGGCGGTTTCAAGAGCCGAAGCCAAGTTCCATGGCTCGTTGAGAAGTACTTGAACAAGGAAATCAAGGTGGACGAGTACGTTACTCACAGCATGAACCTGACTGACATCAACAAGGCGTTTGACCTGCTGCATGAAGGTGGCTGCCTGCGGTGTGTTCTGGCAACTGATAAATGA</cdnaseq>

Protein Sequence

<aaseq>MASSTQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVLATDK</aaseq>

Gene Sequence

<dnaseqindica>1..40#188..324#956..1002#1092..1417#1742..1824#1903..1978#2601..2758#3081..3242#3337..3453#ATGGCTTCCTCGACCCAGGGCCAGGTCATCACCTGCAAAGGTAACCTCTTGGTTCCCCTCTCTTAGTATCGTGGATTCGTGGTGGTAGATTTGCTAGTGTGCTAGAGTTGGATGTATGGTTGCTGTTTCTTGGAGTGTTCTTGGTTTGATCTGGAGTGGGGGATCCCCGGTGTGGTGGTGGGTGCAGCGGCGGTGGCATGGGAGGCCAACAAGCCGATGACGATCGAGGACGTGCAGGTGGCGCCGCCGCAGGCCGGCGAGGTCCGTGTCAAGATCCTCTTCACCGCGCTCTGCCACACCGACCACTACACCTGGAGCGGCAAGGTTTCTCTCTCTCTGTCCCACCGACTCTTACTCGCCGTGTTTCTTCGAAATCTAGATTTCTCGAACTCGCCATTTACACTGGTAGTAGGGTAGTATACTCTTTCCAACCACGTATCTGGTGATGGTAGTTGGTGACCGCACTGGATGGAACCCGATTCATTTTTTTGTTTAATTAGTGGATTAGTATTTAATTGTCAAGTAACATCGTTATGTTATTGTTTCAAGGATTTAGGTGTTTCTTCAGATTATTATGAATGGGAAGATTAAACAATTTTGTACTAGAGGACTCTGGGTTTCTTCTAGGCTTCTAGCTAGCGTTGCATGAGTTCGTCCTATATTTTTATTTTCCTTGACTGCAAAATGGGTGTAGATTGATGGCAATCATCTGTAGGAAATCAAAATTACTGGCAGAAACCTGGAAGTGTTGAGTATTTCTACAGTGGTCTCTACTGGCAGGCAGTAGACCATCAGTATTCTCGTCAGTAGTAGCATCTAAACCGTTGATTTGAGTTCTACTAGTATAATACAATATTCTACCGCCAGTAGATTACTGTACCTTGTGGCAAATGTTGGCAACATTATTATATACCAACCAAACAGGCCCTTATCAAGTGATTTACGTGTCATGCAGGATCCTGAGGGTCTATTTCCTTGCATTCTTGGTCATGAAGCTGCTGGGTAAGCATATAGATGTGCTAATTACATATATGATCATGCACAGCTAAGATAATTGAGCATCGATATGTTTCTTCTGTTTATGTTTATAGAATTGTTGAAAGTGTTGGGGAAGGAGTAACTGAGGTGCAGCCTGGGGACCATGTCATTCCTTGTTACCAAGCAGAATGCAGAGAATGCAAGTTTTGCAAGAGTGGAAAGACCAACCTCTGTGGCAAAGTTCGTGCTGCCACAGGGGTCGGTGTCATGATGAATGATCGCAAGAGCCGTTTCTCAATAAATGGAAAACCCATTTATCATTTCATGGGAACATCTACATTCAGCCAGTATACTGTTGTGCACGATGTCAGTGTCGCAAAGATAAACCCACAGGCACCTCTAGACAAAGTTTGCCTGCTTGGCTGCGGTGTTTCTACTGGTAGGTTCTTCATTGGAGGCCAAACTTTTATTCACCAATTATAGTTCCTTTTGTACCTACTATCATTTTGTAGCTTTACAAACCTTACATGCAGAGCTCGTTGGGTTGTTTGAATGCATTGTGCTTGATTTTTTTTACCATATTTCATAAATATGGAAAGCCTCACTATATCTGTGTCAATGATACCTCCAAATTTCCAATTCTTACTTTTCTTTTGGTACACTGGATACAATATTACATACCATTGCCTCGCACATTCTTGTTATTCTCTTCTAGATAATTATGATATATTCGTATGTGTATCTCACAAATTACTATTGTTAGGCCTCGGAGCAGTATGGAATACCGCAAAGGTTGAAGCAGGTTCCATCGTTGCTATTTTTGGACTTGGCACAGTTGGACTTGCAGTAAGTCAAAATATGTCCATGCACATTTAACATGTTAGTCTGGAAAGAGAGCTTTGACATCTAAGATTTTCATTTTAGGTTGCTGAGGGGGCAAAATCAGCTGGTGCTTCTCGGATTATTGGCATCGACATTGATAGCAAAAAGTTTGATGTCGGTATGTTTCATAATTTCCATTTTTCTGTTTATTGCACCTTTTGGTTGGTAGAGTAAAGGGCATATTCCACTCTCTTAAGTATATCTGGTGAAAGCAGGCAATCCATGTCTGGTGGTGCAACTTGCTAATAGACCTTTCTCTCTTGAATCGAACCTGAAAGTGCAAATCTACGTATTGTTTGATTATCAACAAATACTAGAATAAATTCCAAAGGCTTACTATCCCTTTATAGTAATTCGTTTTTGACTTGCAAAGGCAGTGATGCACCATCAACAATTCCTGAATTTGCCACCATTGTATTTGTCTGAGTTGTGATAGGAAAGATTTTGATCTGTGATCCATTGTTAACTTGTTATTACCATTTATCCTCTTTTGCTTGCATGCACCTTGCTCTTATTAATCATCACATTGCTTTTCGGCATCAGGTCCAGAGATCAAACTTATTATTATTTGTTTATTTCCGCCCATATGCACCACAAATGTGTTCTTACAAATTGGATGCTTTGTATGTGTTATTGAATGATAAAGAATGTATTACATTGCATGAGTTATTTCATAAAAATTGTCTGCAAATCAAACATAGCTTATTTTCCAACTCTTTTTCTGCTGTTATTGTTTGCAGCAAAGAACTTTGGGGTTACAGAATTTGTGAACCCAAAGGACCATGACAAACCAATCCAACAGGTCATAGTTGACCTTACAGACGGTGGTGTGGACTACAGCTTTGAATGCATTGGAAATGTTTCTGTTATGAGGTCTGCATTGGAGTGCTGCCACAAGGTAAGCTACGGCTGCAGCTTTTATTCGGACATCTTTGTGAATTTTGTCGCCTGGTACAAATTAATGACAAACTTCAAAAGAATTAATAAATTGAGTTGAATCATTTGGTGCGGTAATGTCTATTTCTAAATGAATTAATGACATTTGATCTGAATCATATCTTAAATGTGTTGCACTGTCATTTGGATAAACTGCTTTTATTTGAAATACAGCGTATCTGTTTTTATATTTCCATTTATAGATCAATCATACTGTTTTCCACCCATCACAAAGTAAAATATTTTCGCTTTCAACTGTTAAATTTCTGCGGGTATTACTGTAGGGCTGGGGAACCTCTGTCATCGTTGGTGTAGCTGCTTCTGGGCAAGAAATCTCTACACGACCATTCCAGCTCGTCACTGGCCGTGTCTGGAAGGGAACAGCTTTCGGCGGTTTCAAGAGCCGAAGCCAAGTTCCATGGCTCGTTGAGAAGTACTTGAACAAGGTAACAAATCATCACAGTCTAAACTCTAAACCTGCAGAAGTTTCGTCAATCTGTAGTGATTCATCTGACCAGAATTCTCATGTAATCCGCACAGGAAATCAAGGTGGACGAGTACGTTACTCACAGCATGAACCTGACTGACATCAACAAGGCGTTTGACCTGCTGCATGAAGGTGGCTGCCTGCGGTGTGTTCTGGCAACTGATAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009283