BGIOSGA009290

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Revision as of 03:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA009290| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009290, complete gene.| tag = P0643F0...")
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Gene Name

BGIOSGA009290

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009290, complete gene.

LocusTag

P0643F09.17

Ensembl Transcript ID

BGIOSGA009290-TA

Ensembl Protein ID

BGIOSGA009290-PA

Length

3232

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:37134327..37137558

Sequence Coding Region

37134327..37134480,37134574..37134653,37134764..37136536,37136672..37136825,37136915..37137558

Genome Context

<gbrowseImage1> name=IndicaChromosome02:37134327..37137558 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:37134327..37137558 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGAGGGGTTCAAGATAGGAAGCAGAAGAAGAAGCAGGACCTGCAGGTTCTCGGGCCCTTCCCTGGATGCTTGGGTAGGATGATAAACATGTTCGACCTCAGCAATGGCGTGGTCGCGACCAAGATGCTCACAGAGAAAGCGCATAGAGATGTTTCTCCAGCAGGTAAAGACCGTGGTAATGCTTTCAAGATGGCAATTGGTCCATTCTCATCACAGATAGAAGATAAAAAGAGAGATAGTCAGCCTAGAAAGCAGTCCCCAACTAAAAGATTGAGCTCACCAACTAAAAGATCTGGTGAGGCTCCTGTTAAATTGCTCATGGAGCAGGACATGTGGAAAGAAGGGATGTCTGGCGAGGAGCCACTGAATGTTGTTGCCAGATTGATGGGTCTAAATGATGCTGCCGGCCACCAATCTGATCTGAAATCGGGAAAAAGATCAGACAAGGAATATCGATCTGGTGGTTTTGATGAGAACAGTCGGAATCTCAGACCAAAGAAGGACAGCAAAGGCCACCCAAACCAAAAGGCAGGAACACACAGTGAACCATGCAGTGGTTTCAGTGATCAAACTTTAAGAATGAATAGCAGCAGGAATAAACACCAAGGGAAGGAGCCTTCTTGTGAGAAGAGAATGACCCTTGTGCGTGAAAAATTTGCTGAAGCAAAACGTCTGGCTACAGATGAGAAGCTTCTCCACACAAAGGAGTTCCAAGAAGCATTGCAGTTTTTAAGCTCAAATAAAGATCTGTTCTTGAAATTCCTTGATGAGCCAAATCCACTGTTATCACACAACAATTATGAGTTCCAACCTGATACCCCACCTTCGGAGACAAAGCAAATAACCATACTGAAGCCATCAGACTCAATCAAGAGAAATGGCAACACTCTTGTAGGGAGGCAGCTCTATTCAGACGGAGATGAAAGTGAAGGGAACAGGTGCAGGCGTCATCAGAGTTTAAGTGTTTCCCCAACAAATTCAACATTTTCTGAACCAACAAGAATTGTAGTACTAAAGCCAGGACTTGTAAAGTCCCAGGAACCCAAGATTCTGAGGTCCCCTTCATCATCATCAACTGCAGCTGATAGTGAAGATGATAGTATGTCGGCAGTTGATGAGACAGTGCCAAGCTCAAGAAGACTGGCCAAAGAGATCACTTGGCAGATGAGGATGCGTTTGAAAGACAAGCAGGATGAAGAAAACCTACTCTCTTATGAGTTCCATGATATTTATATTGGAGATGACTCCTTCAGCAAGTCAGAAGTTGAGAATGCAAAAGAAGTGTCTGGTGAAATAAGTGAGGATTTGGAGTTCGGTACTCCTACTTCTGGCCGTTCCTGGGATTTCCTGAGCAGGAGTGGCAGCCCTTACTCTGCATCATGCTCTAGTCAGACATCCCATCGGCGTGAACCATCAGTGGTCAGAGAAGCCAAAAAAAGGATTTTTGAGAGATTGTCAATTGTATCATCCACCGTCGGTGGTGAGGAAGAAAGGGAAGCACGCAGAAGTATGGGCACACTAGGTGAGATGCTTACCATTCCAGAAGTCAAGAAAGACCAAGAAGTGTTTGGGGGAGTCACATTGGAGAACCCATCACCTGAGATGGATTCCGAAGAACCGTTCTTGTGTTTGCCACGGTCTCGATCTGTTCCGATTTCTTTGTCTTTTGGAGGCACTGAGCTAAATGGAGTAGCGACCGGATGTCAGGAAGCCGAGAAGGAAAAGAACAGGAAGTCATTATCATTTAGGGAAAAGGTTTCCAGTCTGTTCTCTAAAAATAGGAAAGTGGCTCGGGGGAAGCTAGATCCATCTGGAATTCCATCAACTGATGATAGACTCAAGCATGGAAATTCTGCTACTGTTAATGATTTCAGCGAAAACGCTGATCATTCTGCACTGGACAATCCGCTTAACTGTACTATACAGAATGTCGATGAGATTTCTATGCCAAGGCTCATGGCTAGTTCTTGGCACATGAATGATATGGAAAACATGCCTGCCAAGGATATTTCTTCCATCCCGGTTATTGGTGCCCCAGGAATCTTTGGTGAGTCACAGGACCAACCAAGTCCTGTGTCTGTACTAGATGGACCATTTCTCTCCGATAACAGCAGGAGCTTGCTGTGCTCATCTGAAAGTTTCATCACCGCATCCCCACAAGCTTTGTCGAGATCTCCACTTATCGGATCATTTTCACGCTCACTTTCATGGGAAGATCCCCCACTGGAAGTCATGTCGCCAAATTCCTTGAGACTATCAAGGCTTTTCTCTAAGGCTGACGAAGATCAAGACTCATTGACATTTATCCAGAAGTTAGTCTGCTCTGCTGGCATAGATAGAGAAGGTTGCATGTTATCCAGTCCTTTGGAACTGTATTTGCTTGAGAAGTTCTCAGATTACCAAGAAGAGGGAACCAAATTGCGGGAAAGGCGGTCGAAAGAGAAGTTTCTATTCGATGCTGTCAATGAGGCACTCACAGAGCTCACTTGGACTGCAGAACTGATGGCGTATTCCTGGGGAACGTCATCTTCTTTGGAACGCAAAGATTGTGAGAATGCTTTCAGTAACTCGGCAGCTGATGAAATTTGGCGAGTCATAAGGAACTGGTCGATTCTTGACAAGTATCCACCCGGAGAAACTATTGAAAGAAACCTCCTGGTGGAAATGATACTGAAGAGAGAGGTGTTGGAGGCGGCCAGCAGCGACACGACACGATTGGAGACATTCGAGCTCACCAGTATGGTCTGTACAATGGTCTTGGAGGACCTGATTGCAGATGCAGTTGTAGATCTGAGTGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MRGVQDRKQKKKQDLQVLGPFPGCLGRMINMFDLSNGVVATKMLTEKAHRDVSPAGKDRGNAFKMAIGPFSSQIEDKKRDSQPRKQSPTKRLSSPTKRSGEAPVKLLMEQDMWKEGMSGEEPLNVVARLMGLNDAAGHQSDLKSGKRSDKEYRSGGFDENSRNLRPKKDSKGHPNQKAGTHSEPCSGFSDQTLRMNSSRNKHQGKEPSCEKRMTLVREKFAEAKRLATDEKLLHTKEFQEALQFLSSNKDLFLKFLDEPNPLLSHNNYEFQPDTPPSETKQITILKPSDSIKRNGNTLVGRQLYSDGDESEGNRCRRHQSLSVSPTNSTFSEPTRIVVLKPGLVKSQEPKILRSPSSSSTAADSEDDSMSAVDETVPSSRRLAKEITWQMRMRLKDKQDEENLLSYEFHDIYIGDDSFSKSEVENAKEVSGEISEDLEFGTPTSGRSWDFLSRSGSPYSASCSSQTSHRREPSVVREAKKRIFERLSIVSSTVGGEEEREARRSMGTLGEMLTIPEVKKDQEVFGGVTLENPSPEMDSEEPFLCLPRSRSVPISLSFGGTELNGVATGCQEAEKEKNRKSLSFREKVSSLFSKNRKVARGKLDPSGIPSTDDRLKHGNSATVNDFSENADHSALDNPLNCTIQNVDEISMPRLMASSWHMNDMENMPAKDISSIPVIGAPGIFGESQDQPSPVSVLDGPFLSDNSRSLLCSSESFITASPQALSRSPLIGSFSRSLSWEDPPLEVMSPNSLRLSRLFSKADEDQDSLTFIQKLVCSAGIDREGCMLSSPLELYLLEKFSDYQEEGTKLRERRSKEKFLFDAVNEALTELTWTAELMAYSWGTSSSLERKDCENAFSNSAADEIWRVIRNWSILDKYPPGETIERNLLVEMILKREVLEAASSDTTRLETFELTSMVCTMVLEDLIADAVVDLSA</aaseq>

Gene Sequence

<dnaseqindica>1..154#248..327#438..2210#2346..2499#2589..3232#ATGAGAGGGGTTCAAGATAGGAAGCAGAAGAAGAAGCAGGACCTGCAGGTTCTCGGGCCCTTCCCTGGATGCTTGGGTAGGATGATAAACATGTTCGACCTCAGCAATGGCGTGGTCGCGACCAAGATGCTCACAGAGAAAGCGCATAGAGATGGTATGCGTCTTCGTCTACTTCTGTTTCCCCCTTCTTGTTATGCAAGATTGGTGCTAGACCAAGCTCTGATGCAATGCAGCATACGCCTTGCAGTTTCTCCAGCAGGTAAAGACCGTGGTAATGCTTTCAAGATGGCAATTGGTCCATTCTCATCACAGATAGAAGATAAAAAGGTTAGTGAATTGTCTGTCCCCCTTTGTTTCCTGTTGCTTTTGAACTACAAACGAACTCAAGCATAACCTGGTACTTAGTATGTATATGTTTTTATTTGGTTTTACTACAGAGAGATAGTCAGCCTAGAAAGCAGTCCCCAACTAAAAGATTGAGCTCACCAACTAAAAGATCTGGTGAGGCTCCTGTTAAATTGCTCATGGAGCAGGACATGTGGAAAGAAGGGATGTCTGGCGAGGAGCCACTGAATGTTGTTGCCAGATTGATGGGTCTAAATGATGCTGCCGGCCACCAATCTGATCTGAAATCGGGAAAAAGATCAGACAAGGAATATCGATCTGGTGGTTTTGATGAGAACAGTCGGAATCTCAGACCAAAGAAGGACAGCAAAGGCCACCCAAACCAAAAGGCAGGAACACACAGTGAACCATGCAGTGGTTTCAGTGATCAAACTTTAAGAATGAATAGCAGCAGGAATAAACACCAAGGGAAGGAGCCTTCTTGTGAGAAGAGAATGACCCTTGTGCGTGAAAAATTTGCTGAAGCAAAACGTCTGGCTACAGATGAGAAGCTTCTCCACACAAAGGAGTTCCAAGAAGCATTGCAGTTTTTAAGCTCAAATAAAGATCTGTTCTTGAAATTCCTTGATGAGCCAAATCCACTGTTATCACACAACAATTATGAGTTCCAACCTGATACCCCACCTTCGGAGACAAAGCAAATAACCATACTGAAGCCATCAGACTCAATCAAGAGAAATGGCAACACTCTTGTAGGGAGGCAGCTCTATTCAGACGGAGATGAAAGTGAAGGGAACAGGTGCAGGCGTCATCAGAGTTTAAGTGTTTCCCCAACAAATTCAACATTTTCTGAACCAACAAGAATTGTAGTACTAAAGCCAGGACTTGTAAAGTCCCAGGAACCCAAGATTCTGAGGTCCCCTTCATCATCATCAACTGCAGCTGATAGTGAAGATGATAGTATGTCGGCAGTTGATGAGACAGTGCCAAGCTCAAGAAGACTGGCCAAAGAGATCACTTGGCAGATGAGGATGCGTTTGAAAGACAAGCAGGATGAAGAAAACCTACTCTCTTATGAGTTCCATGATATTTATATTGGAGATGACTCCTTCAGCAAGTCAGAAGTTGAGAATGCAAAAGAAGTGTCTGGTGAAATAAGTGAGGATTTGGAGTTCGGTACTCCTACTTCTGGCCGTTCCTGGGATTTCCTGAGCAGGAGTGGCAGCCCTTACTCTGCATCATGCTCTAGTCAGACATCCCATCGGCGTGAACCATCAGTGGTCAGAGAAGCCAAAAAAAGGATTTTTGAGAGATTGTCAATTGTATCATCCACCGTCGGTGGTGAGGAAGAAAGGGAAGCACGCAGAAGTATGGGCACACTAGGTGAGATGCTTACCATTCCAGAAGTCAAGAAAGACCAAGAAGTGTTTGGGGGAGTCACATTGGAGAACCCATCACCTGAGATGGATTCCGAAGAACCGTTCTTGTGTTTGCCACGGTCTCGATCTGTTCCGATTTCTTTGTCTTTTGGAGGCACTGAGCTAAATGGAGTAGCGACCGGATGTCAGGAAGCCGAGAAGGAAAAGAACAGGAAGTCATTATCATTTAGGGAAAAGGTTTCCAGTCTGTTCTCTAAAAATAGGAAAGTGGCTCGGGGGAAGCTAGATCCATCTGGAATTCCATCAACTGATGATAGACTCAAGCATGGAAATTCTGCTACTGTTAATGATTTCAGCGAAAACGCTGATCATTCTGCACTGGACAATCCGCTTAACTGTACTATACAGAATGTCGATGAGATTTCTATGCCAAGGCTCATGGCTAGTTCTTGGCACATGAATGATATGGAAAACATGCCTGCCAAGGTATTGAGCATGTTATGCTCTGCTCAAACTTACTTTACCGATTTTATAAAAAAAAAAAGGCTTGTATATGTTTGTGCCTTTTCTTCTATAGTCATCCAAAGTTCAAAATATGAAATTTTGGCTCTATTTTGTCAGGATATTTCTTCCATCCCGGTTATTGGTGCCCCAGGAATCTTTGGTGAGTCACAGGACCAACCAAGTCCTGTGTCTGTACTAGATGGACCATTTCTCTCCGATAACAGCAGGAGCTTGCTGTGCTCATCTGAAAGTTTCATCACCGCATCCCCACGTAAGCTGAAAACCCTTTTCATCCAACTATGAAATATAAACAGTTCTTCGTAATATATATGTAAATGACATCTGGGTGTGTGTGTGCAGAAGCTTTGTCGAGATCTCCACTTATCGGATCATTTTCACGCTCACTTTCATGGGAAGATCCCCCACTGGAAGTCATGTCGCCAAATTCCTTGAGACTATCAAGGCTTTTCTCTAAGGCTGACGAAGATCAAGACTCATTGACATTTATCCAGAAGTTAGTCTGCTCTGCTGGCATAGATAGAGAAGGTTGCATGTTATCCAGTCCTTTGGAACTGTATTTGCTTGAGAAGTTCTCAGATTACCAAGAAGAGGGAACCAAATTGCGGGAAAGGCGGTCGAAAGAGAAGTTTCTATTCGATGCTGTCAATGAGGCACTCACAGAGCTCACTTGGACTGCAGAACTGATGGCGTATTCCTGGGGAACGTCATCTTCTTTGGAACGCAAAGATTGTGAGAATGCTTTCAGTAACTCGGCAGCTGATGAAATTTGGCGAGTCATAAGGAACTGGTCGATTCTTGACAAGTATCCACCCGGAGAAACTATTGAAAGAAACCTCCTGGTGGAAATGATACTGAAGAGAGAGGTGTTGGAGGCGGCCAGCAGCGACACGACACGATTGGAGACATTCGAGCTCACCAGTATGGTCTGTACAATGGTCTTGGAGGACCTGATTGCAGATGCAGTTGTAGATCTGAGTGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009290